MGE detailed information
MGE type: Genomic_island MGE length: 29931 bp
Accession: NZ_CP068824 Location: 4727954..4757884 Organism: Escherichia coli strain RIVM_C030197 Replicon: chromosome
Accession: NZ_CP068824 Location: 4727954..4757884 Organism: Escherichia coli strain RIVM_C030197 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN63_RS22785 () | 4723321..4724265 | - | 945 | WP_001521641.1 | DNA-binding transcriptional regulator DsdC | - |
| JNN63_RS22790 () | 4724483..4725820 | + | 1338 | WP_001521642.1 | D-serine transporter DsdX | - |
| JNN63_RS22795 () | 4725838..4727169 | + | 1332 | WP_001521644.1 | D-serine ammonia-lyase | - |
| JNN63_RS22800 () | 4727345..4728543 | + | 1199 | Protein_4466 | IS3 family transposase | - |
| JNN63_RS22805 () | 4728693..4729706 | + | 1014 | WP_021541786.1 | aldose 1-epimerase family protein | - |
| JNN63_RS22810 () | 4729917..4730153 | - | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| JNN63_RS22815 () | 4730222..4730797 | - | 576 | WP_202852182.1 | hypothetical protein | - |
| JNN63_RS22820 () | 4731045..4731611 | - | 567 | WP_001126822.1 | inovirus-type Gp2 protein | - |
| JNN63_RS22825 () | 4733205..4734809 | - | 1605 | WP_001083417.1 | DUF3987 domain-containing protein | - |
| JNN63_RS22830 () | 4735136..4735867 | - | 732 | WP_001075491.1 | inovirus Gp2 family protein | - |
| JNN63_RS22835 () | 4736537..4737067 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| JNN63_RS22840 () | 4738460..4739269 | + | 810 | WP_023155731.1 | hypothetical protein | - |
| JNN63_RS22845 () | 4739266..4740198 | - | 933 | WP_023155730.1 | hypothetical protein | - |
| JNN63_RS22850 () | 4740305..4741189 | + | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| JNN63_RS22855 () | 4741308..4741985 | + | 678 | WP_120136232.1 | hypothetical protein | - |
| JNN63_RS22860 () | 4741991..4742224 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| JNN63_RS22865 () | 4742314..4743132 | + | 819 | WP_063714298.1 | DUF945 domain-containing protein | - |
| JNN63_RS22870 () | 4743214..4743693 | + | 480 | WP_120136233.1 | antirestriction protein | - |
| JNN63_RS22875 () | 4743709..4744185 | + | 477 | WP_001366855.1 | RadC family protein | - |
| JNN63_RS22880 () | 4744248..4744469 | + | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| JNN63_RS22885 () | 4744549..4744923 | + | 375 | WP_001285415.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JNN63_RS22890 () | 4744970..4745347 | + | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| JNN63_RS22895 () | 4745344..4745832 | + | 489 | WP_000761677.1 | hypothetical protein | - |
| JNN63_RS22900 () | 4745844..4746041 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| JNN63_RS22905 () | 4746126..4746992 | + | 867 | WP_001280433.1 | DUF4942 domain-containing protein | - |
| JNN63_RS22910 () | 4747064..4747327 | + | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| JNN63_RS22915 () | 4747324..4747650 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JNN63_RS22920 () | 4748533..4750071 | + | 1539 | WP_001187178.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JNN63_RS22925 () | 4750437..4751771 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JNN63_RS22930 () | 4751851..4753998 | + | 2148 | WP_001550474.1 | lysine decarboxylase CadA | - |
| JNN63_RS22935 () | 4754057..4755514 | + | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| JNN63_RS22940 () | 4755751..4757268 | + | 1518 | WP_001550472.1 | lysine--tRNA ligase | - |
| JNN63_RS22945 () | 4757387..4757560 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JNN63_RS22950 () | 4757588..4757884 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JNN63_RS22955 () | 4758113..4758385 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| JNN63_RS22960 () | 4758397..4758627 | - | 231 | WP_001550470.1 | (4Fe-4S)-binding protein | - |
| JNN63_RS22965 () | 4758807..4760438 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| JNN63_RS22970 () | 4760435..4761154 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|