MGE detailed information
MGE type: Genomic_island MGE length: 45376 bp
Accession: NZ_CP068821 Location: 4737268..4782643 Organism: Escherichia coli strain RIVM_C029952 Replicon: chromosome
Accession: NZ_CP068821 Location: 4737268..4782643 Organism: Escherichia coli strain RIVM_C029952 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN43_RS23055 () | 4732787..4733983 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| JNN43_RS23060 () | 4734268..4734549 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| JNN43_RS23065 () | 4734571..4735356 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| JNN43_RS23070 () | 4735417..4736934 | + | 1518 | WP_000997839.1 | propanediol utilization system aldehyde dehydrogenase GrpJ | - |
| JNN43_RS23075 () | 4736958..4737257 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| JNN43_RS23080 () | 4737268..4737843 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| JNN43_RS23085 () | 4737892..4740444 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| JNN43_RS23090 () | 4740553..4741470 | + | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| JNN43_RS23095 () | 4741607..4742512 | + | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| JNN43_RS23100 () | 4743124..4743493 | + | 370 | Protein_4519 | reverse transcriptase/maturase | - |
| JNN43_RS23105 () | 4743493..4744086 | + | 594 | Protein_4520 | maturase | - |
| JNN43_RS23110 () | 4744669..4745898 | + | 1230 | WP_000792585.1 | propanediol utilization sensor histidine kinase GrpP | - |
| JNN43_RS23115 () | 4745915..4746970 | + | 1056 | WP_000494233.1 | HTH-type transcriptional activator RhaR | VF |
| JNN43_RS23120 () | 4747099..4748250 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| JNN43_RS23125 () | 4748295..4748840 | + | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| JNN43_RS23130 () | 4749197..4749542 | - | 346 | Protein_4525 | hypothetical protein | VF |
| JNN43_RS23135 () | 4749974..4750671 | - | 698 | Protein_4526 | IS1 family transposase IS1A | Transposase |
| JNN43_RS23140 () | 4750728..4750940 | - | 213 | Protein_4527 | hypothetical protein | VF |
| JNN43_RS23145 () | 4751061..4752218 | - | 1158 | Protein_4528 | Multidrug resistance protein MdtB | VF |
| JNN43_RS23150 () | 4752309..4752575 | + | 267 | Protein_4529 | IS3 family transposase IS2 | Transposase |
| JNN43_RS23155 () | 4752637..4752862 | - | 226 | Protein_4530 | hypothetical protein | - |
| JNN43_RS23160 () | 4752874..4753107 | - | 234 | WP_000958486.1 | AlpA family transcriptional regulator | - |
| JNN43_RS23165 () | 4753176..4753751 | - | 576 | Protein_4532 | hypothetical protein | - |
| JNN43_RS23170 () | 4753998..4754564 | - | 567 | WP_060579145.1 | inovirus-type Gp2 protein | - |
| JNN43_RS23175 () | 4755865..4756959 | + | 1095 | WP_000370278.1 | sugar kinase | - |
| JNN43_RS23180 () | 4756978..4758229 | - | 1252 | Protein_4535 | NupC/NupG family nucleoside CNT transporter | - |
| JNN43_RS23185 () | 4758313..4759248 | - | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| JNN43_RS23190 () | 4759241..4760176 | - | 936 | WP_000332862.1 | pseudouridine kinase | - |
| JNN43_RS23195 () | 4760712..4761164 | - | 453 | WP_000558152.1 | N-acetyltransferase | - |
| JNN43_RS23200 () | 4761685..4762416 | - | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| JNN43_RS23205 () | 4763869..4765092 | - | 1224 | WP_001107219.1 | hypothetical protein | - |
| JNN43_RS23210 () | 4765193..4766077 | + | 885 | WP_202851988.1 | 50S ribosome-binding GTPase | - |
| JNN43_RS23215 () | 4766280..4766960 | + | 681 | WP_021515201.1 | WYL domain-containing protein | - |
| JNN43_RS23220 () | 4767111..4767788 | + | 678 | WP_060579144.1 | hypothetical protein | - |
| JNN43_RS23225 () | 4767794..4768027 | + | 234 | WP_000883181.1 | DUF905 family protein | - |
| JNN43_RS23230 () | 4768117..4768935 | + | 819 | WP_001175155.1 | DUF945 domain-containing protein | - |
| JNN43_RS23235 () | 4768961..4769101 | - | 141 | WP_000997937.1 | hypothetical protein | - |
| JNN43_RS23240 () | 4769201..4769680 | + | 480 | WP_000706978.1 | antirestriction protein | - |
| JNN43_RS23245 () | 4769695..4770171 | + | 477 | WP_001186193.1 | RadC family protein | - |
| JNN43_RS23250 () | 4770258..4770479 | + | 222 | WP_000692347.1 | DUF987 domain-containing protein | - |
| JNN43_RS23255 () | 4770559..4770927 | + | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JNN43_RS23260 () | 4771016..4771393 | + | 378 | WP_000854820.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| JNN43_RS23265 () | 4771390..4771587 | + | 198 | Protein_4552 | hypothetical protein | - |
| JNN43_RS23270 () | 4771615..4771812 | + | 198 | WP_085949158.1 | DUF957 domain-containing protein | - |
| JNN43_RS23275 () | 4771897..4772457 | + | 561 | Protein_4554 | DUF4942 domain-containing protein | - |
| JNN43_RS23280 () | 4773292..4774830 | + | 1539 | WP_001187178.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JNN43_RS23285 () | 4775196..4776530 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JNN43_RS23290 () | 4776610..4778757 | + | 2148 | WP_001550474.1 | lysine decarboxylase CadA | - |
| JNN43_RS23295 () | 4778816..4780273 | + | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| JNN43_RS23300 () | 4780510..4782027 | + | 1518 | WP_001550472.1 | lysine--tRNA ligase | - |
| JNN43_RS23305 () | 4782146..4782319 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JNN43_RS23310 () | 4782347..4782643 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JNN43_RS23315 () | 4782871..4783143 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| JNN43_RS23320 () | 4783155..4783385 | - | 231 | WP_001550470.1 | (4Fe-4S)-binding protein | - |
| JNN43_RS23325 () | 4783589..4785196 | + | 1608 | WP_000944875.1 | sensor histidine kinase | - |
| JNN43_RS23330 () | 4785193..4785912 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|