MGE detailed information
MGE type: Genomic_island MGE length: 30915 bp
Accession: NZ_CP068814 Location: 4839780..4870694 Organism: Escherichia coli strain RIVM_C028613 Replicon: chromosome
Accession: NZ_CP068814 Location: 4839780..4870694 Organism: Escherichia coli strain RIVM_C028613 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN56_RS23365 () | 4837876..4838478 | - | 603 | WP_000566901.1 | DUF1788 domain-containing protein | - |
| JNN56_RS23370 () | 4838475..4839077 | - | 603 | WP_089559443.1 | DUF1819 family protein | - |
| JNN56_RS23375 () | 4839586..4840283 | + | 698 | Protein_4577 | IS1 family transposase IS1G | Transposase |
| JNN56_RS23380 () | 4840401..4841744 | - | 1344 | WP_029397907.1 | esterase-like activity of phytase family protein | - |
| JNN56_RS23385 () | 4842103..4843100 | - | 998 | Protein_4579 | IS110 family transposase | - |
| JNN56_RS23390 () | 4843239..4844555 | - | 1317 | WP_000803221.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| JNN56_RS23395 () | 4844726..4844911 | + | 186 | WP_089581225.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| JNN56_RS23400 () | 4844920..4845027 | + | 108 | WP_001313273.1 | hypothetical protein | - |
| JNN56_RS23405 () | 4845689..4846766 | + | 1078 | Protein_4583 | IS3 family transposase IS2 | Transposase |
| JNN56_RS23410 () | 4846889..4847137 | + | 249 | WP_001323514.1 | osmoprotectant transport activator ProQ | - |
| JNN56_RS23415 () | 4847155..4847703 | - | 549 | WP_072794565.1 | hypothetical protein | - |
| JNN56_RS23420 () | 4847981..4848214 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| JNN56_RS23425 () | 4848283..4848855 | - | 573 | WP_000991606.1 | hypothetical protein | - |
| JNN56_RS23430 () | 4848870..4849019 | + | 150 | WP_162720570.1 | hypothetical protein | - |
| JNN56_RS23435 () | 4849239..4849970 | - | 732 | WP_172410721.1 | inovirus Gp2 family protein | - |
| JNN56_RS23440 () | 4851680..4852489 | + | 810 | WP_032216517.1 | hypothetical protein | - |
| JNN56_RS23445 () | 4852486..4853430 | - | 945 | WP_032216516.1 | hypothetical protein | - |
| JNN56_RS23450 () | 4853536..4854420 | + | 885 | WP_032216515.1 | 50S ribosome-binding GTPase | - |
| JNN56_RS23455 () | 4854539..4855216 | + | 678 | WP_032223228.1 | hypothetical protein | - |
| JNN56_RS23460 () | 4855222..4855455 | + | 234 | WP_001278284.1 | DUF905 family protein | - |
| JNN56_RS23465 () | 4855554..4856372 | + | 819 | WP_053902307.1 | DUF945 domain-containing protein | - |
| JNN56_RS23470 () | 4856464..4856949 | + | 486 | WP_032216512.1 | antirestriction protein | - |
| JNN56_RS23475 () | 4856965..4857441 | + | 477 | WP_001186724.1 | RadC family protein | - |
| JNN56_RS23480 () | 4857510..4857731 | + | 222 | WP_001601167.1 | DUF987 domain-containing protein | - |
| JNN56_RS23485 () | 4857750..4857995 | + | 246 | WP_201358319.1 | hypothetical protein | - |
| JNN56_RS23490 () | 4858413..4858781 | + | 369 | WP_032216526.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JNN56_RS23495 () | 4858871..4859248 | + | 378 | WP_000854821.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| JNN56_RS23500 () | 4859245..4859394 | + | 150 | Protein_4602 | hypothetical protein | - |
| JNN56_RS23505 () | 4859470..4859667 | + | 198 | WP_201358328.1 | hypothetical protein | - |
| JNN56_RS23510 () | 4859752..4860594 | + | 843 | WP_032216511.1 | DUF4942 domain-containing protein | - |
| JNN56_RS23515 () | 4861343..4862881 | + | 1539 | WP_001187178.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JNN56_RS23520 () | 4863247..4864581 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JNN56_RS23525 () | 4864661..4866808 | + | 2148 | WP_001550474.1 | lysine decarboxylase CadA | - |
| JNN56_RS23530 () | 4866867..4868324 | + | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| JNN56_RS23535 () | 4868561..4870078 | + | 1518 | WP_001550472.1 | lysine--tRNA ligase | - |
| JNN56_RS23540 () | 4870197..4870370 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JNN56_RS23545 () | 4870398..4870694 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JNN56_RS23550 () | 4870923..4871195 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| JNN56_RS23555 () | 4871207..4871437 | - | 231 | WP_001550470.1 | (4Fe-4S)-binding protein | - |
| JNN56_RS23560 () | 4871617..4873248 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| JNN56_RS23565 () | 4873245..4873964 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|