MGE detailed information
MGE type: Genomic_island MGE length: 61278 bp
Accession: NZ_CP068802 Location: 1141214..1202491 Organism: Escherichia coli strain RIVM_C018249 Replicon: chromosome
Accession: NZ_CP068802 Location: 1141214..1202491 Organism: Escherichia coli strain RIVM_C018249 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN40_RS05620 () | 1136676..1137833 | + | 1158 | WP_001070350.1 | glucans biosynthesis protein MdoC | - |
| JNN40_RS05625 () | 1137841..1139322 | - | 1482 | WP_001605229.1 | cardiolipin synthase ClsC | - |
| JNN40_RS05630 () | 1139264..1139797 | - | 534 | WP_000857405.1 | O-acetyl-ADP-ribose deacetylase | - |
| JNN40_RS05635 () | 1139892..1140203 | - | 312 | WP_000489565.1 | type 1 fimbrial protein | - |
| JNN40_RS05640 () | 1140324..1140656 | - | 333 | WP_000992814.1 | curli assembly protein CsgC | - |
| JNN40_RS05645 () | 1140715..1141173 | - | 459 | WP_000771429.1 | curlin major subunit CsgA | - |
| JNN40_RS05650 () | 1141214..1141669 | - | 456 | WP_001469343.1 | hypothetical protein | VF |
| JNN40_RS05655 () | 1142424..1143074 | + | 651 | WP_000481500.1 | HTH-type transcriptional regulator MalT | VF |
| JNN40_RS05660 () | 1143079..1143468 | + | 390 | WP_000833288.1 | hypothetical protein | VF |
| JNN40_RS05665 () | 1143493..1143909 | + | 417 | WP_001264096.1 | hypothetical protein | VF |
| JNN40_RS05670 () | 1143936..1144769 | + | 834 | WP_001189321.1 | hypothetical protein | VF |
| JNN40_RS05675 () | 1144833..1145324 | - | 492 | WP_032159295.1 | DUF1097 domain-containing protein | - |
| JNN40_RS05680 () | 1145426..1145980 | - | 555 | WP_001001926.1 | molecular chaperone YcdY | - |
| JNN40_RS05685 () | 1146004..1146741 | - | 738 | WP_000283664.1 | zinc-binding phosphatase | - |
| JNN40_RS05690 () | 1146796..1147734 | - | 939 | WP_000351297.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| JNN40_RS05700 () | 1148205..1149047 | - | 843 | WP_001280481.1 | DUF4942 domain-containing protein | - |
| JNN40_RS05705 () | 1149132..1149329 | - | 198 | WP_000839282.1 | DUF957 domain-containing protein | - |
| JNN40_RS05710 () | 1149341..1149832 | - | 492 | WP_000976857.1 | hypothetical protein | - |
| JNN40_RS05715 () | 1149829..1150203 | - | 375 | WP_000854914.1 | TA system toxin CbtA family protein | Toxin Detail |
| JNN40_RS05720 () | 1150250..1150624 | - | 375 | WP_074522479.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JNN40_RS05725 () | 1150787..1151008 | - | 222 | WP_001220314.1 | DUF987 domain-containing protein | - |
| JNN40_RS05730 () | 1151071..1151547 | - | 477 | WP_001186726.1 | RadC family protein | - |
| JNN40_RS05735 () | 1151563..1152048 | - | 486 | WP_000214307.1 | antirestriction protein | - |
| JNN40_RS05740 () | 1152140..1152961 | - | 822 | WP_001761104.1 | DUF945 domain-containing protein | - |
| JNN40_RS05745 () | 1153062..1153270 | - | 209 | Protein_1128 | DUF905 family protein | - |
| JNN40_RS05750 () | 1153371..1153826 | - | 456 | WP_000581506.1 | hypothetical protein | - |
| JNN40_RS05755 () | 1153902..1156418 | - | 2517 | WP_001531238.1 | hypothetical protein | - |
| JNN40_RS05760 () | 1156539..1159385 | - | 2847 | WP_000820576.1 | Ag43/Cah family autotransporter adhesin | - |
| JNN40_RS05765 () | 1159758..1160630 | - | 873 | WP_001069825.1 | GTPase family protein | - |
| JNN40_RS05770 () | 1160846..1161790 | - | 945 | WP_032171640.1 | hypothetical protein | - |
| JNN40_RS05775 () | 1162253..1162507 | - | 255 | WP_154670580.1 | hypothetical protein | - |
| JNN40_RS05780 () | 1162789..1163028 | + | 240 | WP_001431807.1 | hypothetical protein | - |
| JNN40_RS05785 () | 1163068..1165506 | + | 2439 | WP_000985465.1 | type I restriction-modification system subunit M | - |
| JNN40_RS05790 () | 1165506..1166840 | + | 1335 | WP_000228013.1 | restriction endonuclease subunit S | - |
| JNN40_RS05795 () | 1166853..1167509 | + | 657 | WP_000312833.1 | DUF4433 domain-containing protein | Toxin Detail |
| JNN40_RS05800 () | 1167506..1168573 | + | 1068 | WP_000634203.1 | macro domain-containing protein | Antitoxin Detail |
| JNN40_RS05805 () | 1168592..1171687 | + | 3096 | WP_000108735.1 | HsdR family type I site-specific deoxyribonuclease | - |
| JNN40_RS05810 () | 1171687..1172403 | + | 717 | WP_001122107.1 | M48 family metallopeptidase | - |
| JNN40_RS05815 () | 1172748..1173362 | + | 615 | Protein_1142 | IS3 family transposase ISSd1 | Transposase |
| JNN40_RS05820 () | 1173516..1175513 | + | 1998 | WP_001293435.1 | choline BCCT transporter BetT | - |
| JNN40_RS05825 () | 1175576..1175935 | + | 360 | Protein_1144 | DUF2254 domain-containing protein | - |
| JNN40_RS05830 () | 1175965..1177536 | - | 1572 | WP_202859860.1 | IS66 family transposase IS679 | Transposase |
| JNN40_RS05835 () | 1177556..1177903 | - | 348 | WP_202859861.1 | IS66 family transposase ISCro1 | Transposase |
| JNN40_RS05840 () | 1177903..1178553 | - | 651 | WP_000993956.1 | IS66 family transposase IS679 | Transposase |
| JNN40_RS05845 () | 1178639..1179565 | + | 927 | Protein_1148 | DUF2254 domain-containing protein | - |
| JNN40_RS05855 () | 1181074..1181292 | + | 219 | WP_000145481.1 | TetR/AcrR family transcriptional regulator | - |
| JNN40_RS05860 () | 1181343..1181708 | - | 366 | Protein_1151 | IS21 family transposase IS100kyp | Transposase |
| JNN40_RS05865 () | 1181811..1183024 | + | 1214 | WP_164966012.1 | IS3 family transposase IS629 | Transposase |
| JNN40_RS05870 () | 1183067..1183339 | - | 273 | Protein_1153 | inovirus-type Gp2 protein | - |
| JNN40_RS05875 () | 1183433..1183995 | - | 563 | Protein_1154 | inovirus Gp2 family protein | - |
| JNN40_RS05880 () | 1184199..1184405 | - | 207 | WP_042196155.1 | helicase | - |
| JNN40_RS05885 () | 1184512..1185075 | - | 564 | WP_000282110.1 | inovirus-type Gp2 protein | - |
| JNN40_RS05890 () | 1186450..1188285 | - | 1836 | WP_001258873.1 | hypothetical protein | - |
| JNN40_RS05895 () | 1188386..1188673 | + | 288 | WP_000070931.1 | AlpA family transcriptional regulator | - |
| JNN40_RS05900 () | 1188645..1190174 | + | 1530 | WP_005067490.1 | DUF3987 domain-containing protein | - |
| JNN40_RS05905 () | 1190344..1191561 | - | 1218 | WP_000279879.1 | hypothetical protein ; Integrase | Integrase |
| JNN40_RS05910 () | 1192006..1192692 | - | 687 | WP_001605227.1 | DUF2726 domain-containing protein | - |
| JNN40_RS05915 () | 1193254..1194042 | - | 789 | WP_000533536.1 | phosphate starvation-inducible protein PhoH | - |
| JNN40_RS05920 () | 1194641..1195912 | - | 1272 | WP_001199465.1 | deferrochelatase/peroxidase EfeB | - |
| JNN40_RS05925 () | 1195918..1197045 | - | 1128 | WP_000154392.1 | iron uptake system protein EfeO | - |
| JNN40_RS05930 () | 1197103..1197933 | - | 831 | WP_000497935.1 | FTR1 family protein | - |
| JNN40_RS05935 () | 1199124..1200467 | + | 1344 | WP_001247486.1 | hypothetical protein | - |
| JNN40_RS05940 () | 1200615..1202123 | - | 1509 | WP_001018485.1 | sodium/proline symporter PutP | - |
| JNN40_RS05945 () | 1202282..1202491 | - | 210 | WP_000979516.1 | hypothetical protein | - |
| JNN40_RS05950 () | 1202546..1206508 | + | 3963 | WP_001469502.1 | trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase | - |
| JNN40_RS05955 () | 1206548..1207186 | - | 639 | WP_000191701.1 | HTH-type transcriptional regulator RutR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|