MGE detailed information
MGE type: Conjugative plasmid MGE length: 93874 bp
Accession: NZ_CP068697 Location: 1..93874 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain NCCP16345 Replicon: plasmid unnamed
Accession: NZ_CP068697 Location: 1..93874 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain NCCP16345 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JKV46_RS24580 | 728..856 | + | 129 | WP_000372429.1 | hypothetical protein | - |
| JKV46_RS23965 (JKV46_23840) | 942..1100 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| JKV46_RS23970 (JKV46_23845) | 1203..2021 | + | 819 | Protein_3 | DUF932 domain-containing protein | - |
| JKV46_RS23975 (JKV46_23850) | 2332..2802 | - | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| JKV46_RS23980 (JKV46_23855) | 3217..3597 | + | 381 | WP_235176211.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| JKV46_RS23985 (JKV46_23860) | 3790..4476 | + | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| JKV46_RS23990 (JKV46_23865) | 4570..4797 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| JKV46_RS23995 (JKV46_23870) | 4839..5201 | + | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| JKV46_RS24000 (JKV46_23875) | 5216..5527 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| JKV46_RS24005 (JKV46_23880) | 5549..6115 | + | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| JKV46_RS24010 (JKV46_23885) | 6102..6842 | + | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| JKV46_RS24015 (JKV46_23890) | 6842..8263 | + | 1422 | WP_000146700.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| JKV46_RS24020 (JKV46_23895) | 8253..8849 | + | 597 | WP_000527896.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| JKV46_RS24025 (JKV46_23900) | 8827..9072 | + | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| JKV46_RS24030 (JKV46_23905) | 9069..9584 | + | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JKV46_RS24035 (JKV46_23910) | 9719..9940 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| JKV46_RS24040 (JKV46_23915) | 9933..10400 | + | 468 | WP_000549562.1 | hypothetical protein | - |
| JKV46_RS24045 (JKV46_23920) | 10517..10780 | + | 264 | WP_001239255.1 | hypothetical protein | - |
| JKV46_RS24050 (JKV46_23925) | 10796..13444 | + | 2649 | WP_235176212.1 | type IV secretion system protein TraC | - |
| JKV46_RS24055 (JKV46_23930) | 13419..13805 | + | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| JKV46_RS24060 (JKV46_23935) | 13802..14434 | + | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| JKV46_RS24065 (JKV46_23940) | 14431..15423 | + | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| JKV46_RS24070 (JKV46_23945) | 15442..15750 | + | 309 | WP_010999945.1 | hypothetical protein | - |
| JKV46_RS24075 (JKV46_23950) | 15735..16373 | + | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JKV46_RS24080 (JKV46_23955) | 16410..16829 | + | 420 | WP_001229397.1 | HNH endonuclease signature motif containing protein | - |
| JKV46_RS24085 (JKV46_23960) | 16826..18652 | + | 1827 | WP_146471649.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JKV46_RS24090 (JKV46_23965) | 18663..18878 | + | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| JKV46_RS24095 (JKV46_23970) | 18890..19639 | + | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JKV46_RS24100 (JKV46_23975) | 19853..20146 | + | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JKV46_RS24105 (JKV46_23980) | 20133..20681 | + | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JKV46_RS24110 (JKV46_23985) | 20671..22053 | + | 1383 | WP_001161719.1 | conjugal transfer pilus assembly protein TraH | - |
| JKV46_RS24115 (JKV46_23990) | 22050..24872 | + | 2823 | WP_001007086.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| JKV46_RS24120 (JKV46_23995) | 24888..25382 | + | 495 | WP_010999946.1 | entry exclusion protein | - |
| JKV46_RS24125 (JKV46_24000) | 25418..26149 | + | 732 | WP_000782438.1 | conjugal transfer complement resistance protein TraT | - |
| JKV46_RS24130 (JKV46_24005) | 26526..28688 | + | 2163 | WP_000009318.1 | type IV conjugative transfer system coupling protein TraD | - |
| JKV46_RS24135 (JKV46_24010) | 28697..29095 | - | 399 | WP_000911322.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JKV46_RS24140 (JKV46_24015) | 29095..29322 | - | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| JKV46_RS24145 (JKV46_24020) | 29404..34662 | + | 5259 | WP_000986921.1 | conjugative transfer relaxase/helicase TraI | - |
| JKV46_RS24150 (JKV46_24025) | 34682..35422 | + | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| JKV46_RS24155 (JKV46_24030) | 35477..36040 | + | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| JKV46_RS24160 (JKV46_24035) | 36155..36439 | + | 285 | WP_000477658.1 | hypothetical protein | - |
| JKV46_RS24165 (JKV46_24040) | 36491..36607 | + | 117 | WP_001526822.1 | hypothetical protein | - |
| JKV46_RS24170 (JKV46_24045) | 36717..37283 | + | 567 | Protein_43 | phospholipase D family protein | - |
| JKV46_RS24175 (JKV46_24050) | 37394..37660 | + | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| JKV46_RS24180 (JKV46_24055) | 37910..37987 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| JKV46_RS24185 (JKV46_24060) | 37968..38849 | + | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| JKV46_RS24190 (JKV46_24065) | 39736..39930 | + | 195 | Protein_47 | SdiA-regulated domain-containing protein | - |
| JKV46_RS24195 (JKV46_24070) | 40027..40785 | - | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| JKV46_RS24200 (JKV46_24075) | 41052..41609 | - | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| JKV46_RS24205 (JKV46_24080) | 41699..42598 | - | 900 | WP_010999938.1 | YjiK family protein | - |
| JKV46_RS24210 (JKV46_24085) | 42595..42741 | - | 147 | WP_001192557.1 | hypothetical protein | - |
| JKV46_RS24215 (JKV46_24090) | 42731..43384 | - | 654 | WP_000178592.1 | DsbA family protein | - |
| JKV46_RS24220 (JKV46_24095) | 43629..43979 | - | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| JKV46_RS24225 (JKV46_24100) | 43964..44176 | - | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| JKV46_RS24230 (JKV46_24105) | 44608..45483 | - | 876 | WP_014343944.1 | hypothetical protein | - |
| JKV46_RS24235 (JKV46_24110) | 45736..46293 | - | 558 | WP_010999940.1 | membrane protein | - |
| JKV46_RS24240 (JKV46_24115) | 46308..47000 | - | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| JKV46_RS24245 (JKV46_24120) | 46993..49401 | - | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| JKV46_RS24250 (JKV46_24125) | 49629..50147 | - | 519 | WP_000748205.1 | major pilin PefA | - |
| JKV46_RS24255 (JKV46_24130) | 50422..50724 | - | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| JKV46_RS24260 (JKV46_24135) | 51443..51824 | + | 382 | Protein_61 | YgiW/YdeI family stress tolerance OB fold protein | - |
| JKV46_RS24265 (JKV46_24140) | 51993..52437 | + | 445 | Protein_62 | tyrosine-type recombinase/integrase | - |
| JKV46_RS24270 (JKV46_24145) | 52696..53685 | - | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| JKV46_RS24275 (JKV46_24150) | 54179..54475 | - | 297 | WP_001687482.1 | hypothetical protein | - |
| JKV46_RS24280 | 54487..54915 | + | 429 | Protein_65 | hypothetical protein | - |
| JKV46_RS24285 (JKV46_24155) | 54959..55480 | - | 522 | WP_010999942.1 | hypothetical protein | - |
| JKV46_RS24290 (JKV46_24160) | 56156..56374 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| JKV46_RS24295 (JKV46_24165) | 56376..56681 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| JKV46_RS24300 (JKV46_24170) | 56683..56973 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| JKV46_RS24305 (JKV46_24175) | 56970..57491 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| JKV46_RS24310 (JKV46_24180) | 57526..58308 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| JKV46_RS24315 (JKV46_24185) | 58317..58868 | + | 552 | WP_000545754.1 | EAL domain-containing protein | - |
| JKV46_RS24320 (JKV46_24190) | 59055..59543 | + | 489 | WP_001075507.1 | CaiF/GrlA family transcriptional regulator | - |
| JKV46_RS24325 (JKV46_24195) | 59537..60022 | + | 486 | WP_000905606.1 | membrane protein | - |
| JKV46_RS24330 (JKV46_24200) | 60299..60586 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| JKV46_RS24335 (JKV46_24205) | 60742..61302 | + | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| JKV46_RS24340 (JKV46_24210) | 61369..61719 | - | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| JKV46_RS24345 (JKV46_24215) | 61776..62200 | + | 425 | Protein_78 | IS200/IS605 family transposase | - |
| JKV46_RS24350 (JKV46_24220) | 62327..62977 | - | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| JKV46_RS24355 (JKV46_24225) | 63238..63963 | - | 726 | WP_235176209.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| JKV46_RS24360 (JKV46_24230) | 64244..66019 | - | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| JKV46_RS24365 (JKV46_24235) | 66071..66238 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| JKV46_RS24370 (JKV46_24240) | 66201..66968 | - | 768 | WP_001526990.1 | virulence protein SpvA | - |
| JKV46_RS24375 (JKV46_24245) | 67142..67306 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| JKV46_RS24380 (JKV46_24250) | 67480..68373 | - | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| JKV46_RS24385 (JKV46_24255) | 68982..70019 | + | 1038 | WP_001121399.1 | IS630 family transposase | - |
| JKV46_RS24390 (JKV46_24260) | 70208..71233 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| JKV46_RS24395 (JKV46_24265) | 71166..72830 | - | 1665 | WP_000098783.1 | IS481 family transposase | - |
| JKV46_RS24400 (JKV46_24270) | 72814..73374 | - | 561 | WP_001240331.1 | recombinase family protein | - |
| JKV46_RS24405 (JKV46_24275) | 73581..74321 | - | 741 | WP_001541566.1 | carbonic anhydrase family protein | - |
| JKV46_RS24410 (JKV46_24280) | 74976..75464 | - | 489 | WP_001135407.1 | hypothetical protein | - |
| JKV46_RS24415 (JKV46_24285) | 75723..76838 | + | 1116 | WP_235176210.1 | DNA-binding protein | - |
| JKV46_RS24420 (JKV46_24290) | 76924..77340 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| JKV46_RS24425 (JKV46_24295) | 77443..77859 | + | 417 | WP_000988946.1 | hypothetical protein | - |
| JKV46_RS24430 (JKV46_24300) | 77916..78517 | + | 602 | Protein_95 | DUF2913 family protein | - |
| JKV46_RS24435 (JKV46_24305) | 78514..79455 | - | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| JKV46_RS24440 (JKV46_24310) | 79870..81075 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| JKV46_RS24445 (JKV46_24315) | 81075..82049 | + | 975 | WP_000064274.1 | ParB family protein | - |
| JKV46_RS24450 (JKV46_24320) | 82131..83405 | - | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| JKV46_RS24455 (JKV46_24325) | 83405..83827 | - | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JKV46_RS24460 (JKV46_24330) | 84338..84808 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| JKV46_RS24465 (JKV46_24335) | 84801..85157 | + | 357 | WP_070130127.1 | hypothetical protein | - |
| JKV46_RS24470 | 85095..85376 | - | 282 | WP_146671468.1 | hypothetical protein | - |
| JKV46_RS24475 (JKV46_24340) | 85539..86219 | + | 681 | WP_000088645.1 | DNA methylase | - |
| JKV46_RS24480 (JKV46_24345) | 86219..86440 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| JKV46_RS24485 (JKV46_24350) | 86496..86909 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
| JKV46_RS24490 (JKV46_24355) | 86981..87745 | + | 765 | WP_001246548.1 | membrane protein | - |
| JKV46_RS24495 (JKV46_24360) | 88241..88675 | + | 435 | WP_001200150.1 | antirestriction protein | - |
| JKV46_RS24500 (JKV46_24365) | 88742..89176 | + | 435 | WP_000274533.1 | DUF1380 family protein | - |
| JKV46_RS24505 (JKV46_24370) | 89412..89735 | + | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| JKV46_RS24510 (JKV46_24375) | 89699..89884 | + | 186 | WP_133165360.1 | hypothetical protein | - |
| JKV46_RS24515 (JKV46_24380) | 90478..90996 | + | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| JKV46_RS24520 (JKV46_24385) | 91051..91293 | + | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| JKV46_RS24525 (JKV46_24390) | 91362..93359 | + | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| JKV46_RS24530 (JKV46_24395) | 93399..93833 | + | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|