MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 58077 bp
Accession: NZ_CP068684 Location: 4568281..4626357 Organism: Klebsiella pneumoniae subsp. pneumoniae strain RJBSI76-pV Replicon: chromosome
Accession: NZ_CP068684 Location: 4568281..4626357 Organism: Klebsiella pneumoniae subsp. pneumoniae strain RJBSI76-pV Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMY88_RS22435 () | 4563547..4564800 | + | 1254 | WP_004151767.1 | nucleoside permease | - |
| JMY88_RS22440 () | 4564844..4566982 | - | 2139 | WP_004151766.1 | ornithine decarboxylase | - |
| JMY88_RS22445 () | 4567402..4568115 | + | 714 | WP_002916694.1 | DUF554 domain-containing protein | - |
| JMY88_RS22455 () | 4568514..4569461 | - | 948 | WP_002916695.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| JMY88_RS22460 () | 4569478..4570767 | - | 1290 | WP_004188585.1 | TraI domain-containing protein | - |
| JMY88_RS22465 () | 4570902..4571882 | - | 981 | WP_004151764.1 | DUF1738 domain-containing protein | - |
| JMY88_RS22470 () | 4571966..4572571 | - | 606 | WP_004151763.1 | DUF3085 domain-containing protein | - |
| JMY88_RS22475 () | 4572674..4573021 | - | 348 | WP_004151762.1 | hypothetical protein | - |
| JMY88_RS22480 () | 4573119..4573517 | - | 399 | WP_004151761.1 | antirestriction protein | - |
| JMY88_RS22485 () | 4573600..4573878 | - | 279 | WP_004151760.1 | hypothetical protein | - |
| JMY88_RS22490 () | 4574223..4575176 | + | 954 | WP_004151759.1 | hypothetical protein | - |
| JMY88_RS22495 () | 4575181..4576074 | - | 894 | WP_004151758.1 | hypothetical protein ; Integrase | Integrase |
| JMY88_RS22500 () | 4577088..4577228 | - | 141 | WP_004151757.1 | hypothetical protein | - |
| JMY88_RS22505 () | 4577321..4578301 | + | 981 | WP_000019473.1 | IS5 family transposase ISKpn26 | Transposase |
| JMY88_RS22510 () | 4578612..4578872 | + | 261 | WP_004152614.1 | helix-turn-helix domain-containing protein | - |
| JMY88_RS22515 () | 4579013..4579468 | + | 456 | WP_004152613.1 | cold shock domain-containing protein | - |
| JMY88_RS22520 () | 4579547..4579792 | - | 246 | WP_004155677.1 | helix-turn-helix domain-containing protein | - |
| JMY88_RS22525 () | 4579896..4580147 | + | 252 | WP_004152612.1 | helix-turn-helix domain-containing protein | - |
| JMY88_RS22530 () | 4580372..4580671 | + | 300 | WP_004152611.1 | hypothetical protein | - |
| JMY88_RS22535 () | 4580715..4582244 | - | 1530 | WP_004152610.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| JMY88_RS22540 () | 4582247..4582588 | - | 342 | WP_004152609.1 | hypothetical protein | - |
| JMY88_RS22545 () | 4582585..4584006 | - | 1422 | WP_004153700.1 | integrating conjugative element protein | - |
| JMY88_RS22550 () | 4584022..4584963 | - | 942 | WP_004152607.1 | TIGR03756 family integrating conjugative element protein | - |
| JMY88_RS22555 () | 4584960..4585355 | - | 396 | WP_004152606.1 | TIGR03757 family integrating conjugative element protein | - |
| JMY88_RS22560 () | 4585473..4587071 | - | 1599 | WP_004154311.1 | hypothetical protein | - |
| JMY88_RS22565 () | 4587275..4588285 | - | 1011 | WP_004150870.1 | hypothetical protein | - |
| JMY88_RS22570 () | 4588491..4589108 | - | 618 | WP_004199166.1 | SymE family type I addiction module toxin | - |
| JMY88_RS22575 () | 4590208..4590489 | + | 282 | WP_016197749.1 | hypothetical protein | - |
| JMY88_RS22580 () | 4590542..4591909 | + | 1368 | WP_004150873.1 | hypothetical protein | - |
| JMY88_RS22585 () | 4592149..4592853 | + | 705 | WP_004150874.1 | restriction endonuclease | - |
| JMY88_RS22590 () | 4593354..4596131 | - | 2778 | WP_004188577.1 | conjugative transfer ATPase | - |
| JMY88_RS22595 () | 4596128..4596526 | - | 399 | WP_004150877.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| JMY88_RS22600 () | 4596540..4598024 | - | 1485 | WP_004217763.1 | TIGR03752 family integrating conjugative element protein | - |
| JMY88_RS22605 () | 4598021..4598866 | - | 846 | WP_004150879.1 | TIGR03749 family integrating conjugative element protein | - |
| JMY88_RS22610 () | 4598866..4599519 | - | 654 | WP_004150880.1 | TIGR03746 family integrating conjugative element protein | - |
| JMY88_RS22615 () | 4599516..4599887 | - | 372 | WP_004150881.1 | TIGR03750 family conjugal transfer protein | - |
| JMY88_RS22620 () | 4599897..4600250 | - | 354 | WP_004150882.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| JMY88_RS22625 () | 4600265..4600501 | - | 237 | WP_004150883.1 | TIGR03758 family integrating conjugative element protein | - |
| JMY88_RS22630 () | 4600498..4600815 | - | 318 | WP_004150884.1 | hypothetical protein | - |
| JMY88_RS22635 () | 4601264..4601938 | + | 675 | WP_004217767.1 | hypothetical protein | - |
| JMY88_RS22640 () | 4602198..4602674 | - | 477 | WP_004150886.1 | hypothetical protein | - |
| JMY88_RS22645 () | 4602776..4603468 | - | 693 | WP_072093156.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| JMY88_RS22650 () | 4603534..4603797 | - | 264 | WP_004150888.1 | hypothetical protein | - |
| JMY88_RS22655 () | 4603794..4605893 | - | 2100 | WP_004150889.1 | type IV conjugative transfer system coupling protein TraD | - |
| JMY88_RS22660 () | 4605931..4606443 | - | 513 | WP_004153655.1 | integrating conjugative element protein | - |
| JMY88_RS22665 () | 4606440..4607009 | - | 570 | WP_004150891.1 | hypothetical protein | VF |
| JMY88_RS22670 () | 4606988..4607605 | - | 618 | WP_004153005.1 | TIGR03759 family integrating conjugative element protein | - |
| JMY88_RS22675 () | 4607719..4608459 | - | 741 | WP_004150893.1 | hypothetical protein | - |
| JMY88_RS22680 () | 4608459..4609028 | - | 570 | WP_004150894.1 | hypothetical protein | VF |
| JMY88_RS22685 () | 4609152..4609604 | - | 453 | WP_004150895.1 | DUF3577 domain-containing protein | - |
| JMY88_RS22690 () | 4610191..4610328 | - | 138 | WP_014343427.1 | hypothetical protein | - |
| JMY88_RS22695 () | 4610321..4611043 | - | 723 | WP_004150896.1 | TIGR03761 family integrating conjugative element protein | - |
| JMY88_RS22700 () | 4611437..4612522 | + | 1086 | WP_004150897.1 | hypothetical protein | - |
| JMY88_RS22705 () | 4612687..4613388 | + | 702 | WP_004227625.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| JMY88_RS22710 () | 4613464..4614219 | - | 756 | WP_022644655.1 | DUF2321 domain-containing protein | - |
| JMY88_RS22715 () | 4614610..4615938 | - | 1329 | WP_004150900.1 | WG repeat-containing protein | - |
| JMY88_RS22720 () | 4616120..4616389 | + | 270 | Protein_4437 | hypothetical protein | - |
| JMY88_RS22725 () | 4617080..4618297 | - | 1218 | WP_004150902.1 | helix-turn-helix domain-containing protein | - |
| JMY88_RS22730 () | 4618297..4618881 | - | 585 | WP_004150903.1 | DUF2857 domain-containing protein | - |
| JMY88_RS22735 () | 4618881..4620503 | - | 1623 | WP_004150904.1 | transcriptional regulator | - |
| JMY88_RS22740 () | 4620500..4621867 | - | 1368 | WP_004150905.1 | replicative DNA helicase | - |
| JMY88_RS22745 () | 4621860..4622243 | - | 384 | WP_004150906.1 | hypothetical protein | - |
| JMY88_RS22750 () | 4622243..4623115 | - | 873 | WP_004188557.1 | hypothetical protein | VF |
| JMY88_RS22755 () | 4623721..4623937 | - | 217 | Protein_4444 | IS3 family transposase ISYpe1 | Transposase |
| JMY88_RS22760 () | 4624034..4624627 | - | 594 | WP_004188553.1 | hypothetical protein | - |
| JMY88_RS22765 () | 4625331..4625816 | - | 486 | WP_004150910.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JMY88_RS22770 () | 4625813..4626106 | - | 294 | WP_004150912.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JMY88_RS22775 () | 4626751..4628127 | + | 1377 | WP_004217775.1 | cystathionine beta-synthase | - |
| JMY88_RS22780 () | 4628138..4629286 | + | 1149 | WP_004150915.1 | PLP-dependent aspartate aminotransferase family protein | - |
| JMY88_RS22785 () | 4629287..4630198 | - | 912 | WP_004188550.1 | LysR family transcriptional regulator | - |
| JMY88_RS22790 () | 4630296..4630898 | + | 603 | WP_062954968.1 | short chain dehydrogenase | - |
| JMY88_RS22795 () | 4630985..4631329 | + | 345 | WP_004174409.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Klebsiella pneumoniae subsp. pneumoniae HS11286 | Integrative and Conjugative Element | TA26030 | NC_016845 | 4502831..4561944 | 0.001 |