MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 86517 bp
Accession: NZ_CP068638 Location: 1787820..1874336 Organism: Vibrio parahaemolyticus strain VP120 Replicon: chromosome
Accession: NZ_CP068638 Location: 1787820..1874336 Organism: Vibrio parahaemolyticus strain VP120 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JHT21_RS08060 (JHT21_08050) | 1782944..1783309 | + | 366 | WP_029805606.1 | VOC family protein | - |
| JHT21_RS08065 (JHT21_08055) | 1783411..1783794 | + | 384 | WP_005464338.1 | hypothetical protein | - |
| JHT21_RS08070 (JHT21_08060) | 1783876..1784610 | - | 735 | WP_025550837.1 | hypothetical protein | - |
| JHT21_RS08075 (JHT21_08065) | 1784642..1784800 | - | 159 | WP_005477734.1 | hypothetical protein | - |
| JHT21_RS08080 (JHT21_08070) | 1785548..1786924 | + | 1377 | WP_029805609.1 | sodium:alanine symporter family protein | - |
| JHT21_RS08085 (JHT21_08075) | 1787033..1787599 | - | 567 | WP_029805610.1 | hypothetical protein | - |
| JHT21_RS08090 (JHT21_08080) | 1787600..1788235 | - | 636 | WP_005464660.1 | LysE family translocator | - |
| JHT21_RS08095 (JHT21_08085) | 1788457..1789929 | + | 1473 | WP_029805611.1 | carboxypeptidase M32 | - |
| JHT21_RS08100 (JHT21_08090) | 1790016..1790975 | - | 960 | WP_029805613.1 | Lipid A biosynthesis lauroyltransferase | VF |
| JHT21_RS08105 (JHT21_08095) | 1791659..1793086 | + | 1428 | WP_029805615.1 | Glutamate/gamma-aminobutyrate antiporter | VF |
| JHT21_RS08110 (JHT21_08100) | 1793199..1793558 | - | 360 | WP_005485673.1 | hypothetical protein | - |
| JHT21_RS08115 (JHT21_08105) | 1793936..1794877 | + | 942 | WP_005464332.1 | homoserine O-succinyltransferase | - |
| JHT21_RS08120 (JHT21_08110) | 1795027..1795752 | + | 726 | WP_005477819.1 | Beta-barrel assembly-enhancing protease | VF |
| JHT21_RS08125 (JHT21_08115) | 1796083..1797012 | + | 930 | WP_021486610.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| JHT21_RS08130 (JHT21_08120) | 1797012..1799171 | + | 2160 | WP_029805140.1 | putative signaling protein | VF |
| JHT21_RS08135 (JHT21_08125) | 1799346..1802501 | + | 3156 | WP_029805137.1 | response regulator | - |
| JHT21_RS08140 (JHT21_08130) | 1802519..1802992 | + | 474 | WP_031822878.1 | hypothetical protein | - |
| JHT21_RS08145 (JHT21_08135) | 1802994..1804082 | + | 1089 | WP_029805135.1 | sulfate ABC transporter permease | - |
| JHT21_RS08150 (JHT21_08140) | 1804162..1804788 | - | 627 | WP_025508940.1 | Galactoside O-acetyltransferase | VF |
| JHT21_RS08155 (JHT21_08145) | 1804970..1805302 | - | 333 | WP_005464576.1 | hypothetical protein | - |
| JHT21_RS08160 (JHT21_08150) | 1805486..1806031 | - | 546 | WP_025578003.1 | class IV adenylate cyclase | - |
| JHT21_RS08165 (JHT21_08155) | 1806119..1806553 | - | 435 | WP_005477866.1 | DUF962 domain-containing protein | - |
| JHT21_RS08170 (JHT21_08160) | 1806678..1807031 | - | 354 | WP_025578004.1 | MmcQ/YjbR family DNA-binding protein | - |
| JHT21_RS08175 (JHT21_08165) | 1807064..1807546 | - | 483 | WP_023623467.1 | MarR family transcriptional regulator | - |
| JHT21_RS08180 (JHT21_08170) | 1807667..1808554 | + | 888 | WP_029805131.1 | DMT family transporter | - |
| JHT21_RS08185 (JHT21_08175) | 1808614..1809441 | - | 828 | WP_025540620.1 | AraC family transcriptional regulator | - |
| JHT21_RS08190 (JHT21_08180) | 1809576..1810217 | - | 642 | WP_029804634.1 | alanyl-tRNA editing protein | - |
| JHT21_RS08195 (JHT21_08185) | 1810348..1812513 | - | 2166 | WP_029804633.1 | hypothetical protein | VF |
| JHT21_RS08200 (JHT21_08190) | 1813070..1814578 | - | 1509 | WP_029804632.1 | putative cyclic di-GMP phosphodiesterase PdeG | VF |
| JHT21_RS08205 (JHT21_08195) | 1814931..1815947 | - | 1017 | WP_005477846.1 | manganese-dependent inorganic pyrophosphatase | - |
| JHT21_RS08210 (JHT21_08200) | 1816211..1817482 | - | 1272 | WP_029804631.1 | 4-aminobutyrate aminotransferase PuuE | VF |
| JHT21_RS08215 (JHT21_08205) | 1817497..1818924 | - | 1428 | WP_029804630.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| JHT21_RS08220 (JHT21_08210) | 1818979..1820061 | - | 1083 | WP_029804629.1 | agmatine deiminase | - |
| JHT21_RS08225 (JHT21_08215) | 1820074..1820940 | - | 867 | WP_029804628.1 | N-carbamoylputrescine amidase | - |
| JHT21_RS08230 (JHT21_08220) | 1820958..1822235 | - | 1278 | WP_029795336.1 | FAD-binding oxidoreductase | - |
| JHT21_RS08235 (JHT21_08225) | 1822273..1823757 | - | 1485 | WP_029804627.1 | aldehyde dehydrogenase | - |
| JHT21_RS08240 (JHT21_08230) | 1823793..1824350 | - | 558 | WP_005464588.1 | ISNCY family transposase ISH7A | Transposase |
| JHT21_RS08245 (JHT21_08235) | 1824369..1825115 | - | 747 | WP_029804626.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | - |
| JHT21_RS08250 (JHT21_08240) | 1825456..1826799 | + | 1344 | WP_029804625.1 | glutamine synthetase family protein | - |
| JHT21_RS08255 (JHT21_08245) | 1826818..1828293 | + | 1476 | WP_025557583.1 | Na+/H+ antiporter NhaC family protein | - |
| JHT21_RS08260 (JHT21_08250) | 1828384..1828845 | - | 462 | WP_005500350.1 | hypothetical protein | - |
| JHT21_RS08265 (JHT21_08255) | 1829187..1829633 | + | 447 | WP_021449154.1 | DUF3291 domain-containing protein | - |
| JHT21_RS08270 | 1830186..1830374 | - | 189 | WP_021823297.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| JHT21_RS08280 (JHT21_08270) | 1832182..1832472 | - | 291 | WP_005500341.1 | YkgJ family cysteine cluster protein | - |
| JHT21_RS08285 (JHT21_08275) | 1832739..1833023 | + | 285 | WP_005398409.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| JHT21_RS08290 (JHT21_08280) | 1833020..1833298 | + | 279 | WP_005500338.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| JHT21_RS08295 (JHT21_08285) | 1833327..1833416 | - | 90 | WP_072828858.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08300 (JHT21_08290) | 1833434..1833787 | - | 354 | WP_017449619.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| JHT21_RS08305 (JHT21_08295) | 1834244..1834312 | - | 69 | WP_074531725.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08310 (JHT21_08300) | 1834387..1834635 | + | 249 | WP_005377003.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JHT21_RS08315 (JHT21_08305) | 1834625..1834915 | + | 291 | WP_005377002.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JHT21_RS08320 (JHT21_08310) | 1835054..1835413 | - | 360 | WP_029806843.1 | hypothetical protein | - |
| JHT21_RS08325 (JHT21_08315) | 1835569..1835952 | - | 384 | WP_029806841.1 | hypothetical protein | - |
| JHT21_RS08330 (JHT21_08320) | 1836108..1836650 | - | 543 | WP_029806840.1 | SEC-C metal-binding domain-containing protein | - |
| JHT21_RS08335 (JHT21_08325) | 1836725..1836835 | - | 111 | WP_077345731.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08340 (JHT21_08330) | 1837119..1837208 | - | 90 | WP_077345730.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08345 (JHT21_08335) | 1837231..1837572 | - | 342 | WP_029807300.1 | hypothetical protein | - |
| JHT21_RS08350 | 1837769..1837957 | - | 189 | Protein_1616 | hypothetical protein | - |
| JHT21_RS08355 (JHT21_08340) | 1838184..1838696 | - | 513 | WP_029807290.1 | hypothetical protein | - |
| JHT21_RS08360 (JHT21_08345) | 1839210..1839338 | - | 129 | WP_077345729.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08365 | 1839746..1839874 | - | 129 | WP_089184017.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08370 (JHT21_08350) | 1839865..1840386 | - | 522 | WP_000058623.1 | GrpB family protein | - |
| JHT21_RS08375 (JHT21_08355) | 1840414..1840506 | - | 93 | WP_011105944.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08380 (JHT21_08360) | 1840534..1840914 | - | 381 | WP_061064929.1 | nuclear transport factor 2 family protein | - |
| JHT21_RS08385 (JHT21_08365) | 1840942..1841085 | - | 144 | WP_225868821.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08390 (JHT21_08370) | 1841489..1841602 | - | 114 | WP_161795965.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08395 (JHT21_08375) | 1842035..1842124 | - | 90 | WP_077281742.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08400 | 1842583..1842633 | - | 51 | WP_229651053.1 | hypothetical protein | - |
| JHT21_RS08405 (JHT21_08385) | 1843049..1843138 | - | 90 | WP_079740854.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08410 (JHT21_08390) | 1843156..1843632 | - | 477 | WP_047022990.1 | GNAT family N-acetyltransferase | - |
| JHT21_RS08415 (JHT21_08395) | 1843666..1843758 | - | 93 | WP_080342802.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08420 (JHT21_08400) | 1843793..1844194 | - | 402 | WP_041956323.1 | HIT family protein | - |
| JHT21_RS08425 (JHT21_08405) | 1845188..1845316 | - | 129 | WP_104411424.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08430 (JHT21_08410) | 1845855..1846226 | - | 372 | WP_029807031.1 | RidA family protein | - |
| JHT21_RS08435 (JHT21_08415) | 1846376..1846852 | - | 477 | WP_029807029.1 | GNAT family N-acetyltransferase | - |
| JHT21_RS08440 (JHT21_08420) | 1846880..1847026 | - | 147 | WP_077345741.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08450 (JHT21_08430) | 1847523..1847846 | - | 324 | WP_029807330.1 | hypothetical protein | - |
| JHT21_RS08455 (JHT21_08435) | 1847876..1847968 | - | 93 | WP_077345740.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08460 (JHT21_08440) | 1847993..1848514 | - | 522 | WP_029807279.1 | hypothetical protein | - |
| JHT21_RS08465 (JHT21_08445) | 1848559..1848678 | - | 120 | WP_161795962.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08470 (JHT21_08450) | 1848953..1849045 | - | 93 | WP_077345739.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08475 (JHT21_08455) | 1849068..1849517 | - | 450 | WP_010645962.1 | GyrI-like domain-containing protein | - |
| JHT21_RS08480 (JHT21_08460) | 1849653..1850141 | - | 489 | WP_029807198.1 | hypothetical protein | - |
| JHT21_RS08485 (JHT21_08465) | 1850191..1850283 | - | 93 | WP_011105944.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08490 (JHT21_08470) | 1850311..1850691 | - | 381 | WP_047022988.1 | nuclear transport factor 2 family protein | - |
| JHT21_RS08495 (JHT21_08475) | 1850719..1850808 | - | 90 | WP_071652537.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08500 (JHT21_08480) | 1850826..1851302 | - | 477 | WP_047022987.1 | GNAT family N-acetyltransferase | - |
| JHT21_RS08505 (JHT21_08485) | 1851336..1851428 | - | 93 | WP_077345985.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08510 (JHT21_08490) | 1851451..1851960 | - | 510 | WP_225868805.1 | Sbal_3080 family lipoprotein | - |
| JHT21_RS08515 (JHT21_08495) | 1852689..1853069 | - | 381 | WP_029805565.1 | diacylglycerol kinase | - |
| JHT21_RS08520 (JHT21_08500) | 1853075..1854724 | - | 1650 | WP_029805568.1 | Phosphoethanolamine transferase EptA | VF |
| JHT21_RS08525 (JHT21_08505) | 1855001..1855282 | + | 282 | WP_031810041.1 | PepSY domain-containing protein | - |
| JHT21_RS08530 (JHT21_08510) | 1855269..1855787 | + | 519 | WP_029805571.1 | cytochrome b/b6 domain-containing protein | - |
| JHT21_RS08535 (JHT21_08515) | 1856358..1856540 | + | 183 | WP_021448657.1 | YegP family protein | - |
| JHT21_RS08540 (JHT21_08520) | 1856961..1857371 | - | 411 | WP_021448658.1 | hypothetical protein | - |
| JHT21_RS08545 (JHT21_08525) | 1857436..1857780 | - | 345 | WP_025523159.1 | hypothetical protein | - |
| JHT21_RS08550 (JHT21_08530) | 1858215..1859465 | - | 1251 | WP_021448660.1 | VapE family protein | - |
| JHT21_RS08555 (JHT21_08535) | 1859458..1859700 | - | 243 | WP_021448661.1 | helix-turn-helix domain-containing protein | - |
| JHT21_RS08560 (JHT21_08540) | 1859787..1860794 | - | 1008 | WP_029805573.1 | hypothetical protein | - |
| JHT21_RS08565 (JHT21_08545) | 1860906..1862090 | - | 1185 | WP_029805575.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| JHT21_RS08570 (JHT21_08550) | 1862257..1862382 | - | 126 | WP_077345937.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08575 (JHT21_08555) | 1862372..1862998 | - | 627 | WP_021823303.1 | Leucine efflux protein | VF |
| JHT21_RS08580 (JHT21_08560) | 1863041..1863133 | - | 93 | WP_077345938.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08585 (JHT21_08565) | 1863148..1863453 | - | 306 | WP_025630475.1 | hypothetical protein | - |
| JHT21_RS08590 (JHT21_08570) | 1863484..1863576 | - | 93 | WP_077345939.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08595 (JHT21_08575) | 1863591..1864274 | - | 684 | WP_029807193.1 | hypothetical protein | - |
| JHT21_RS08600 (JHT21_08580) | 1864308..1864400 | - | 93 | WP_080342802.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08605 (JHT21_08585) | 1864435..1864836 | - | 402 | WP_041956323.1 | HIT family protein | - |
| JHT21_RS08610 (JHT21_08590) | 1864869..1864979 | - | 111 | WP_077345968.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08615 (JHT21_08595) | 1864976..1865371 | - | 396 | WP_029807295.1 | hypothetical protein | - |
| JHT21_RS08620 (JHT21_08600) | 1865400..1865492 | - | 93 | WP_072600976.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08625 (JHT21_08605) | 1865512..1866258 | - | 747 | WP_029807066.1 | KilA-N domain-containing protein | - |
| JHT21_RS08630 (JHT21_08610) | 1866454..1867017 | - | 564 | WP_029807064.1 | hypothetical protein | - |
| JHT21_RS08635 (JHT21_08615) | 1867045..1867134 | - | 90 | Protein_1672 | DUF3265 domain-containing protein | - |
| JHT21_RS08640 (JHT21_08620) | 1867162..1867533 | - | 372 | WP_025506710.1 | hypothetical protein | - |
| JHT21_RS08645 (JHT21_08625) | 1867699..1868145 | - | 447 | WP_029806922.1 | GNAT family N-acetyltransferase | - |
| JHT21_RS08650 (JHT21_08630) | 1869485..1869697 | - | 213 | WP_023623384.1 | hypothetical protein | - |
| JHT21_RS08655 (JHT21_08635) | 1869805..1870236 | - | 432 | WP_013571587.1 | DUF695 domain-containing protein | - |
| JHT21_RS08660 (JHT21_08640) | 1870404..1870763 | - | 360 | WP_005477812.1 | VOC family protein | - |
| JHT21_RS08665 (JHT21_08645) | 1870750..1870921 | - | 172 | Protein_1678 | DUF3265 domain-containing protein | - |
| JHT21_RS08670 (JHT21_08650) | 1871387..1871794 | - | 408 | WP_031822898.1 | hypothetical protein | - |
| JHT21_RS08675 (JHT21_08655) | 1871823..1871960 | - | 138 | WP_077345965.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08680 (JHT21_08660) | 1873166..1873327 | + | 162 | WP_154216921.1 | hypothetical protein | - |
| JHT21_RS08685 (JHT21_08665) | 1873375..1873746 | - | 372 | WP_029806765.1 | hypothetical protein | - |
| JHT21_RS08690 (JHT21_08670) | 1873898..1874203 | - | 306 | WP_029806764.1 | NIPSNAP family protein | - |
| JHT21_RS08695 (JHT21_08675) | 1874257..1874349 | - | 93 | WP_077345746.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08700 (JHT21_08680) | 1874373..1875461 | - | 1089 | WP_031822893.1 | TIR domain-containing protein | - |
| JHT21_RS08705 (JHT21_08685) | 1875552..1875659 | - | 108 | Protein_1686 | DUF3265 domain-containing protein | - |
| JHT21_RS08710 (JHT21_08690) | 1876100..1876192 | - | 93 | WP_017045846.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08715 (JHT21_08695) | 1876227..1876628 | - | 402 | WP_041956334.1 | HIT family protein | - |
| JHT21_RS08720 (JHT21_08700) | 1876661..1876753 | - | 93 | WP_077345744.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08725 (JHT21_08705) | 1876780..1877406 | - | 627 | WP_021822674.1 | LysE family translocator | - |
| JHT21_RS08730 (JHT21_08710) | 1877447..1877560 | - | 114 | WP_021448828.1 | DUF3265 domain-containing protein | - |
| JHT21_RS08735 (JHT21_08715) | 1877566..1878192 | - | 627 | WP_031410966.1 | LysE family translocator | - |
| JHT21_RS08740 (JHT21_08720) | 1878341..1878838 | - | 498 | WP_029863388.1 | DUF2867 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|