MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 86517 bp
Accession: NZ_CP068631 Location: 1787820..1874336 Organism: Vibrio parahaemolyticus strain TJ-20 Replicon: chromosome
Accession: NZ_CP068631 Location: 1787820..1874336 Organism: Vibrio parahaemolyticus strain TJ-20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JHT10_RS16205 (JHT10_16185) | 1782944..1783309 | + | 366 | WP_029805606.1 | VOC family protein | - |
| JHT10_RS16210 (JHT10_16190) | 1783411..1783794 | + | 384 | WP_005464338.1 | hypothetical protein | - |
| JHT10_RS16215 (JHT10_16195) | 1783876..1784610 | - | 735 | WP_025550837.1 | hypothetical protein | - |
| JHT10_RS16220 (JHT10_16200) | 1784642..1784800 | - | 159 | WP_005477734.1 | hypothetical protein | - |
| JHT10_RS16225 (JHT10_16205) | 1785548..1786924 | + | 1377 | WP_029805609.1 | sodium:alanine symporter family protein | - |
| JHT10_RS16230 (JHT10_16210) | 1787033..1787599 | - | 567 | WP_029805610.1 | hypothetical protein | - |
| JHT10_RS16235 (JHT10_16215) | 1787600..1788235 | - | 636 | WP_005464660.1 | LysE family translocator | - |
| JHT10_RS16240 (JHT10_16220) | 1788457..1789929 | + | 1473 | WP_029805611.1 | carboxypeptidase M32 | - |
| JHT10_RS16245 (JHT10_16225) | 1790016..1790975 | - | 960 | WP_029805613.1 | Lipid A biosynthesis lauroyltransferase | VF |
| JHT10_RS16250 (JHT10_16230) | 1791659..1793086 | + | 1428 | WP_029805615.1 | Glutamate/gamma-aminobutyrate antiporter | VF |
| JHT10_RS16255 (JHT10_16235) | 1793199..1793558 | - | 360 | WP_005485673.1 | hypothetical protein | - |
| JHT10_RS16260 (JHT10_16240) | 1793936..1794877 | + | 942 | WP_005464332.1 | homoserine O-succinyltransferase | - |
| JHT10_RS16265 (JHT10_16245) | 1795027..1795752 | + | 726 | WP_005477819.1 | Beta-barrel assembly-enhancing protease | VF |
| JHT10_RS16270 (JHT10_16250) | 1796083..1797012 | + | 930 | WP_021486610.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| JHT10_RS16275 (JHT10_16255) | 1797012..1799171 | + | 2160 | WP_029805140.1 | putative signaling protein | VF |
| JHT10_RS16280 (JHT10_16260) | 1799346..1802501 | + | 3156 | WP_029805137.1 | response regulator | - |
| JHT10_RS16285 (JHT10_16265) | 1802519..1802992 | + | 474 | WP_031822878.1 | hypothetical protein | - |
| JHT10_RS16290 (JHT10_16270) | 1802994..1804082 | + | 1089 | WP_029805135.1 | sulfate ABC transporter permease | - |
| JHT10_RS16295 (JHT10_16275) | 1804162..1804788 | - | 627 | WP_025508940.1 | Galactoside O-acetyltransferase | VF |
| JHT10_RS16300 (JHT10_16280) | 1804970..1805302 | - | 333 | WP_005464576.1 | hypothetical protein | - |
| JHT10_RS16305 (JHT10_16285) | 1805486..1806031 | - | 546 | WP_025578003.1 | class IV adenylate cyclase | - |
| JHT10_RS16310 (JHT10_16290) | 1806119..1806553 | - | 435 | WP_005477866.1 | DUF962 domain-containing protein | - |
| JHT10_RS16315 (JHT10_16295) | 1806678..1807031 | - | 354 | WP_025578004.1 | MmcQ/YjbR family DNA-binding protein | - |
| JHT10_RS16320 (JHT10_16300) | 1807064..1807546 | - | 483 | WP_023623467.1 | MarR family transcriptional regulator | - |
| JHT10_RS16325 (JHT10_16305) | 1807667..1808554 | + | 888 | WP_029805131.1 | DMT family transporter | - |
| JHT10_RS16330 (JHT10_16310) | 1808614..1809441 | - | 828 | WP_025540620.1 | AraC family transcriptional regulator | - |
| JHT10_RS16335 (JHT10_16315) | 1809576..1810217 | - | 642 | WP_029804634.1 | alanyl-tRNA editing protein | - |
| JHT10_RS16340 (JHT10_16320) | 1810348..1812513 | - | 2166 | WP_029804633.1 | hypothetical protein | VF |
| JHT10_RS16345 (JHT10_16325) | 1813070..1814500 | - | 1431 | WP_229651029.1 | putative cyclic di-GMP phosphodiesterase PdeG | VF |
| JHT10_RS16350 (JHT10_16330) | 1814931..1815947 | - | 1017 | WP_005477846.1 | manganese-dependent inorganic pyrophosphatase | - |
| JHT10_RS16355 (JHT10_16335) | 1816211..1817482 | - | 1272 | WP_029804631.1 | 4-aminobutyrate aminotransferase PuuE | VF |
| JHT10_RS16360 (JHT10_16340) | 1817497..1818924 | - | 1428 | WP_029804630.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| JHT10_RS16365 (JHT10_16345) | 1818979..1820061 | - | 1083 | WP_029804629.1 | agmatine deiminase | - |
| JHT10_RS16370 (JHT10_16350) | 1820074..1820940 | - | 867 | WP_029804628.1 | N-carbamoylputrescine amidase | - |
| JHT10_RS16375 (JHT10_16355) | 1820958..1822235 | - | 1278 | WP_029795336.1 | FAD-binding oxidoreductase | - |
| JHT10_RS16380 (JHT10_16360) | 1822273..1823757 | - | 1485 | WP_029804627.1 | aldehyde dehydrogenase | - |
| JHT10_RS16385 (JHT10_16365) | 1823793..1824350 | - | 558 | WP_005464588.1 | ISNCY family transposase ISH7A | Transposase |
| JHT10_RS16390 (JHT10_16370) | 1824369..1825115 | - | 747 | WP_029804626.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | - |
| JHT10_RS16395 (JHT10_16375) | 1825456..1826799 | + | 1344 | WP_029804625.1 | glutamine synthetase family protein | - |
| JHT10_RS16400 (JHT10_16380) | 1826818..1828293 | + | 1476 | WP_025557583.1 | Na+/H+ antiporter NhaC family protein | - |
| JHT10_RS16405 (JHT10_16385) | 1828384..1828845 | - | 462 | WP_005500350.1 | hypothetical protein | - |
| JHT10_RS16410 (JHT10_16390) | 1829187..1829633 | + | 447 | WP_021449154.1 | DUF3291 domain-containing protein | - |
| JHT10_RS16415 | 1830186..1830374 | - | 189 | WP_021823297.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| JHT10_RS16425 (JHT10_16405) | 1832182..1832472 | - | 291 | WP_005500341.1 | YkgJ family cysteine cluster protein | - |
| JHT10_RS16430 (JHT10_16410) | 1832739..1833023 | + | 285 | WP_005398409.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| JHT10_RS16435 (JHT10_16415) | 1833020..1833298 | + | 279 | WP_005500338.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| JHT10_RS16440 (JHT10_16420) | 1833327..1833416 | - | 90 | WP_072828858.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16445 (JHT10_16425) | 1833434..1833787 | - | 354 | WP_017449619.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| JHT10_RS16450 (JHT10_16430) | 1834244..1834312 | - | 69 | WP_074531725.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16455 (JHT10_16435) | 1834387..1834635 | + | 249 | WP_005377003.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JHT10_RS16460 (JHT10_16440) | 1834625..1834915 | + | 291 | WP_005377002.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JHT10_RS16465 (JHT10_16445) | 1835054..1835413 | - | 360 | WP_029806843.1 | hypothetical protein | - |
| JHT10_RS16470 (JHT10_16450) | 1835569..1835952 | - | 384 | WP_029806841.1 | hypothetical protein | - |
| JHT10_RS16475 (JHT10_16455) | 1836108..1836650 | - | 543 | WP_029806840.1 | SEC-C metal-binding domain-containing protein | - |
| JHT10_RS16480 (JHT10_16460) | 1836725..1836835 | - | 111 | WP_077345731.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16485 (JHT10_16465) | 1837119..1837208 | - | 90 | WP_077345730.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16490 (JHT10_16470) | 1837231..1837572 | - | 342 | WP_029807300.1 | hypothetical protein | - |
| JHT10_RS16495 | 1837769..1837957 | - | 189 | Protein_1616 | hypothetical protein | - |
| JHT10_RS16500 (JHT10_16475) | 1838184..1838696 | - | 513 | WP_029807290.1 | hypothetical protein | - |
| JHT10_RS16505 (JHT10_16480) | 1839210..1839338 | - | 129 | WP_077345729.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16510 | 1839746..1839874 | - | 129 | WP_089184017.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16515 (JHT10_16485) | 1839865..1840386 | - | 522 | WP_000058623.1 | GrpB family protein | - |
| JHT10_RS16520 (JHT10_16490) | 1840414..1840506 | - | 93 | WP_011105944.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16525 (JHT10_16495) | 1840534..1840914 | - | 381 | WP_061064929.1 | nuclear transport factor 2 family protein | - |
| JHT10_RS16530 (JHT10_16500) | 1840942..1841085 | - | 144 | WP_225868821.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16535 (JHT10_16505) | 1841489..1841602 | - | 114 | WP_161795965.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16540 (JHT10_16510) | 1842035..1842124 | - | 90 | WP_077281742.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16545 | 1842583..1842633 | - | 51 | WP_229651053.1 | hypothetical protein | - |
| JHT10_RS16550 (JHT10_16520) | 1843049..1843138 | - | 90 | WP_079740854.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16555 (JHT10_16525) | 1843156..1843632 | - | 477 | WP_047022990.1 | GNAT family N-acetyltransferase | - |
| JHT10_RS16560 (JHT10_16530) | 1843666..1843758 | - | 93 | WP_080342802.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16565 (JHT10_16535) | 1843793..1844194 | - | 402 | WP_041956323.1 | HIT family protein | - |
| JHT10_RS16570 (JHT10_16540) | 1845188..1845316 | - | 129 | WP_104411424.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16575 (JHT10_16545) | 1845855..1846226 | - | 372 | WP_029807031.1 | RidA family protein | - |
| JHT10_RS16580 (JHT10_16550) | 1846376..1846852 | - | 477 | WP_029807029.1 | GNAT family N-acetyltransferase | - |
| JHT10_RS16585 (JHT10_16555) | 1846880..1847026 | - | 147 | WP_077345741.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16595 (JHT10_16565) | 1847523..1847846 | - | 324 | WP_029807330.1 | hypothetical protein | - |
| JHT10_RS16600 (JHT10_16570) | 1847876..1847968 | - | 93 | WP_077345740.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16605 (JHT10_16575) | 1847993..1848514 | - | 522 | WP_029807279.1 | hypothetical protein | - |
| JHT10_RS16610 (JHT10_16580) | 1848559..1848678 | - | 120 | WP_161795962.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16615 (JHT10_16585) | 1848953..1849045 | - | 93 | WP_077345739.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16620 (JHT10_16590) | 1849068..1849517 | - | 450 | WP_010645962.1 | GyrI-like domain-containing protein | - |
| JHT10_RS16625 (JHT10_16595) | 1849653..1850141 | - | 489 | WP_029807198.1 | hypothetical protein | - |
| JHT10_RS16630 (JHT10_16600) | 1850191..1850283 | - | 93 | WP_011105944.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16635 (JHT10_16605) | 1850311..1850691 | - | 381 | WP_047022988.1 | nuclear transport factor 2 family protein | - |
| JHT10_RS16640 (JHT10_16610) | 1850719..1850808 | - | 90 | WP_071652537.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16645 (JHT10_16615) | 1850826..1851302 | - | 477 | WP_047022987.1 | GNAT family N-acetyltransferase | - |
| JHT10_RS16650 (JHT10_16620) | 1851336..1851428 | - | 93 | WP_077345985.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16655 (JHT10_16625) | 1851451..1851960 | - | 510 | WP_225868805.1 | Sbal_3080 family lipoprotein | - |
| JHT10_RS16660 (JHT10_16630) | 1852689..1853069 | - | 381 | WP_029805565.1 | diacylglycerol kinase | - |
| JHT10_RS16665 (JHT10_16635) | 1853075..1854724 | - | 1650 | WP_029805568.1 | Phosphoethanolamine transferase EptA | VF |
| JHT10_RS16670 (JHT10_16640) | 1855001..1855282 | + | 282 | WP_031810041.1 | PepSY domain-containing protein | - |
| JHT10_RS16675 (JHT10_16645) | 1855269..1855787 | + | 519 | WP_029805571.1 | cytochrome b/b6 domain-containing protein | - |
| JHT10_RS16680 (JHT10_16650) | 1856358..1856540 | + | 183 | WP_021448657.1 | YegP family protein | - |
| JHT10_RS16685 (JHT10_16655) | 1856961..1857371 | - | 411 | WP_021448658.1 | hypothetical protein | - |
| JHT10_RS16690 (JHT10_16660) | 1857436..1857780 | - | 345 | WP_025523159.1 | hypothetical protein | - |
| JHT10_RS16695 (JHT10_16665) | 1858215..1859465 | - | 1251 | WP_021448660.1 | VapE family protein | - |
| JHT10_RS16700 (JHT10_16670) | 1859458..1859700 | - | 243 | WP_021448661.1 | helix-turn-helix domain-containing protein | - |
| JHT10_RS16705 (JHT10_16675) | 1859787..1860794 | - | 1008 | WP_029805573.1 | hypothetical protein | - |
| JHT10_RS16710 (JHT10_16680) | 1860906..1862090 | - | 1185 | WP_029805575.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| JHT10_RS16715 (JHT10_16685) | 1862257..1862382 | - | 126 | WP_077345937.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16720 (JHT10_16690) | 1862372..1862998 | - | 627 | WP_021823303.1 | Leucine efflux protein | VF |
| JHT10_RS16725 (JHT10_16695) | 1863041..1863133 | - | 93 | WP_077345938.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16730 (JHT10_16700) | 1863148..1863453 | - | 306 | WP_025630475.1 | hypothetical protein | - |
| JHT10_RS16735 (JHT10_16705) | 1863484..1863576 | - | 93 | WP_077345939.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16740 (JHT10_16710) | 1863591..1864274 | - | 684 | WP_029807193.1 | hypothetical protein | - |
| JHT10_RS16745 (JHT10_16715) | 1864308..1864400 | - | 93 | WP_080342802.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16750 (JHT10_16720) | 1864435..1864836 | - | 402 | WP_041956323.1 | HIT family protein | - |
| JHT10_RS16755 (JHT10_16725) | 1864869..1864979 | - | 111 | WP_077345968.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16760 (JHT10_16730) | 1864976..1865371 | - | 396 | WP_029807295.1 | hypothetical protein | - |
| JHT10_RS16765 (JHT10_16735) | 1865400..1865492 | - | 93 | WP_072600976.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16770 (JHT10_16740) | 1865512..1866258 | - | 747 | WP_029807066.1 | KilA-N domain-containing protein | - |
| JHT10_RS16775 (JHT10_16745) | 1866454..1867017 | - | 564 | WP_029807064.1 | hypothetical protein | - |
| JHT10_RS16780 (JHT10_16750) | 1867045..1867134 | - | 90 | Protein_1672 | DUF3265 domain-containing protein | - |
| JHT10_RS16785 (JHT10_16755) | 1867162..1867533 | - | 372 | WP_025506710.1 | hypothetical protein | - |
| JHT10_RS16790 (JHT10_16760) | 1867699..1868145 | - | 447 | WP_029806922.1 | GNAT family N-acetyltransferase | - |
| JHT10_RS16795 (JHT10_16765) | 1869485..1869697 | - | 213 | WP_023623384.1 | hypothetical protein | - |
| JHT10_RS16800 (JHT10_16770) | 1869805..1870236 | - | 432 | WP_013571587.1 | DUF695 domain-containing protein | - |
| JHT10_RS16805 (JHT10_16775) | 1870404..1870763 | - | 360 | WP_005477812.1 | VOC family protein | - |
| JHT10_RS16810 (JHT10_16780) | 1870750..1870921 | - | 172 | Protein_1678 | DUF3265 domain-containing protein | - |
| JHT10_RS16815 (JHT10_16785) | 1871387..1871794 | - | 408 | WP_031822898.1 | hypothetical protein | - |
| JHT10_RS16820 (JHT10_16790) | 1871823..1871960 | - | 138 | WP_077345965.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16825 (JHT10_16795) | 1873166..1873327 | + | 162 | WP_154216921.1 | hypothetical protein | - |
| JHT10_RS16830 (JHT10_16800) | 1873375..1873746 | - | 372 | WP_029806765.1 | hypothetical protein | - |
| JHT10_RS16835 (JHT10_16805) | 1873898..1874203 | - | 306 | WP_029806764.1 | NIPSNAP family protein | - |
| JHT10_RS16840 (JHT10_16810) | 1874257..1874349 | - | 93 | WP_077345746.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16845 (JHT10_16815) | 1874373..1875461 | - | 1089 | WP_031822893.1 | TIR domain-containing protein | - |
| JHT10_RS16850 (JHT10_16820) | 1875552..1875659 | - | 108 | Protein_1686 | DUF3265 domain-containing protein | - |
| JHT10_RS16855 (JHT10_16825) | 1876100..1876192 | - | 93 | WP_017045846.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16860 (JHT10_16830) | 1876227..1876628 | - | 402 | WP_041956334.1 | HIT family protein | - |
| JHT10_RS16865 (JHT10_16835) | 1876661..1876753 | - | 93 | WP_077345744.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16870 (JHT10_16840) | 1876780..1877406 | - | 627 | WP_021822674.1 | LysE family translocator | - |
| JHT10_RS16875 (JHT10_16845) | 1877447..1877560 | - | 114 | WP_021448828.1 | DUF3265 domain-containing protein | - |
| JHT10_RS16880 (JHT10_16850) | 1877566..1878192 | - | 627 | WP_031410966.1 | LysE family translocator | - |
| JHT10_RS16885 (JHT10_16855) | 1878341..1878838 | - | 498 | WP_029863388.1 | DUF2867 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|