MGE detailed information
MGE type: Conjugative plasmid MGE length: 80453 bp
Accession: NZ_CP068153 Location: 1..80453 Organism: Escherichia coli strain FDAARGOS_1077 Replicon: plasmid unnamed1
Accession: NZ_CP068153 Location: 1..80453 Organism: Escherichia coli strain FDAARGOS_1077 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6I34_RS00010 () | 328..1068 | - | 741 | WP_000884837.1 | abortive infection family protein | - |
| I6I34_RS00015 () | 1104..1892 | - | 789 | WP_000708306.1 | DUF2971 domain-containing protein | - |
| I6I34_RS00020 () | 1889..2509 | - | 621 | WP_001247238.1 | hypothetical protein | - |
| I6I34_RS00025 () | 2506..3117 | - | 612 | WP_000209845.1 | DNA-binding protein | - |
| I6I34_RS00030 () | 3659..4009 | + | 351 | WP_000493380.1 | hypothetical protein | - |
| I6I34_RS00035 () | 4079..4687 | + | 609 | WP_000715519.1 | hypothetical protein | - |
| I6I34_RS00040 () | 4755..5537 | + | 783 | WP_001372173.1 | site-specific integrase | - |
| I6I34_RS00045 () | 5675..5950 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| I6I34_RS00050 () | 5944..6588 | - | 645 | WP_000633913.1 | AAA family ATPase | - |
| I6I34_RS00055 () | 6817..7788 | + | 972 | WP_001103690.1 | hypothetical protein | - |
| I6I34_RS00060 () | 7793..8185 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| I6I34_RS00065 () | 8190..9461 | - | 1272 | WP_052971087.1 | Y-family DNA polymerase | - |
| I6I34_RS00070 () | 9461..9898 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| I6I34_RS00075 () | 9895..10143 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| I6I34_RS00080 () | 10562..11464 | + | 903 | WP_096917582.1 | DUF1281 domain-containing protein | - |
| I6I34_RS00085 () | 11468..11772 | + | 305 | Protein_16 | hypothetical protein | - |
| I6I34_RS00090 () | 11849..12532 | + | 684 | WP_000086185.1 | DNA methylase | - |
| I6I34_RS00095 () | 12533..12754 | + | 222 | WP_077738470.1 | hypothetical protein | - |
| I6I34_RS00100 () | 12768..13202 | + | 435 | WP_077738469.1 | DUF1380 family protein | - |
| I6I34_RS00105 () | 13253..14023 | + | 771 | WP_202020886.1 | hypothetical protein | - |
| I6I34_RS00110 () | 14563..14865 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| I6I34_RS00115 () | 14912..15334 | + | 423 | WP_077738507.1 | DUF1380 family protein | - |
| I6I34_RS00120 () | 15331..15522 | + | 192 | WP_001027497.1 | hypothetical protein | - |
| I6I34_RS00125 () | 15855..15923 | - | 69 | Protein_24 | pilus protein | - |
| I6I34_RS00130 () | 16292..16819 | + | 528 | WP_077738485.1 | single-stranded DNA-binding protein | - |
| I6I34_RS00135 () | 16877..17110 | + | 234 | WP_000006025.1 | DUF905 domain-containing protein | - |
| I6I34_RS00140 () | 17169..19127 | + | 1959 | WP_202020887.1 | ParB/RepB/Spo0J family partition protein | - |
| I6I34_RS00145 () | 19182..19616 | + | 435 | WP_122990857.1 | conjugation system SOS inhibitor PsiB | - |
| I6I34_RS00150 () | 19613..20332 | + | 720 | WP_077738442.1 | plasmid SOS inhibition protein A | - |
| I6I34_RS00155 () | 20329..20511 | + | 183 | WP_077738443.1 | hypothetical protein | - |
| I6I34_RS00160 () | 20608..20925 | + | 318 | WP_139354836.1 | hypothetical protein | - |
| I6I34_RS00165 () | 21388..21888 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| I6I34_RS00170 () | 22617..23051 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| I6I34_RS00175 () | 23145..23411 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| I6I34_RS00180 () | 23476..24393 | + | 918 | WP_077738497.1 | Recombination-promoting nuclease RpnA | VF |
| I6I34_RS00185 () | 24455..24625 | + | 171 | WP_069200648.1 | hypothetical protein | - |
| I6I34_RS00190 () | 24656..24907 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| I6I34_RS00195 () | 25486..26334 | + | 849 | WP_077738499.1 | DUF4942 domain-containing protein | - |
| I6I34_RS00200 () | 26420..26755 | - | 336 | WP_000157093.1 | hypothetical protein | - |
| I6I34_RS00205 () | 26989..27321 | + | 333 | WP_077738500.1 | IncI1-type relaxosome accessory protein NikA | - |
| I6I34_RS00210 () | 27332..30031 | + | 2700 | WP_077738501.1 | Protein TraI | Relaxase |
| I6I34_RS00215 () | 30068..32359 | - | 2292 | WP_077738502.1 | conjugal transfer protein TrbC | - |
| I6I34_RS00220 () | 32352..33422 | - | 1071 | WP_052895276.1 | IncI1-type conjugal transfer protein TrbB | - |
| I6I34_RS00225 () | 33441..34649 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 34829..34891 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 34829..34891 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 34829..34891 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 34829..34891 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| I6I34_RS00230 () | 34941..35093 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| I6I34_RS00235 () | 35165..35416 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| - () | 35803..35854 | - | 52 | NuclAT_1 | - | - |
| - () | 35803..35854 | - | 52 | NuclAT_1 | - | - |
| - () | 35803..35854 | - | 52 | NuclAT_1 | - | - |
| - () | 35803..35854 | - | 52 | NuclAT_1 | - | - |
| I6I34_RS00240 () | 36340..36516 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| I6I34_RS00245 () | 36908..37117 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| I6I34_RS00250 () | 37189..37851 | - | 663 | WP_077738432.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| I6I34_RS00255 () | 37916..40084 | - | 2169 | WP_077738433.1 | DotA/TraY family protein | - |
| I6I34_RS00260 () | 40181..40765 | - | 585 | WP_077738434.1 | conjugal transfer protein TraX | - |
| I6I34_RS00265 () | 40794..41996 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| I6I34_RS00270 () | 41963..42310 | - | 348 | Protein_53 | IncI1-type conjugal transfer protein TraV | - |
| I6I34_RS00275 () | 42368..43162 | - | 795 | WP_000544809.1 | IS21 family transposase ISEc62 | Transposase |
| I6I34_RS00280 () | 43162..44334 | - | 1173 | WP_000952428.1 | IS21 family transposase ISEc62 | Transposase |
| I6I34_RS00285 () | 44495..45289 | - | 795 | WP_000544809.1 | IS21 family transposase ISEc62 | Transposase |
| I6I34_RS00290 () | 45289..46461 | - | 1173 | WP_000952428.1 | IS21 family transposase ISEc62 | Transposase |
| I6I34_RS00295 () | 46546..47278 | - | 733 | Protein_58 | DNA primase | - |
| I6I34_RS00300 () | 47369..47920 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| I6I34_RS00305 () | 47935..48225 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| I6I34_RS00310 () | 48222..49370 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| I6I34_RS00315 () | 49367..50185 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| I6I34_RS00320 () | 50182..50640 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| I6I34_RS00325 () | 51035..51619 | - | 585 | WP_001611722.1 | histidine phosphatase family protein | - |
| I6I34_RS00330 () | 51679..52881 | - | 1203 | WP_000976348.1 | conjugal transfer protein TraF | - |
| I6I34_RS00335 () | 52967..53791 | - | 825 | Protein_66 | conjugal transfer protein TraE | - |
| I6I34_RS00340 () | 53999..54124 | + | 126 | Protein_67 | transposase | - |
| I6I34_RS00345 () | 54181..55473 | - | 1293 | WP_001350014.1 | hypothetical protein | VF |
| I6I34_RS00350 () | 55473..56129 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| I6I34_RS00355 () | 56114..56674 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| I6I34_RS00360 () | 56684..57298 | - | 615 | WP_000908226.1 | hypothetical protein | VF |
| I6I34_RS00365 () | 57315..58400 | - | 1086 | WP_077738380.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| I6I34_RS00370 () | 58413..59966 | - | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| I6I34_RS00375 () | 59977..60429 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| I6I34_RS00380 () | 60416..61711 | - | 1296 | WP_000752780.1 | type 4b pilus protein PilO2 | - |
| I6I34_RS00385 () | 61704..63386 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| I6I34_RS00390 () | 63400..63837 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| I6I34_RS00395 () | 63837..64904 | - | 1068 | WP_077137504.1 | hypothetical protein | VF |
| I6I34_RS00400 () | 65880..65999 | - | 120 | Protein_79 | PilI type IV pilus biogenesis protein | - |
| I6I34_RS00405 () | 66171..66854 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| I6I34_RS00410 () | 67108..67641 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| I6I34_RS00415 () | 68083..68370 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| I6I34_RS00420 () | 68288..68551 | - | 264 | WP_001749178.1 | ash family protein | - |
| I6I34_RS00425 () | 69523..70554 | + | 1032 | WP_022630251.1 | replication initiation protein | - |
| I6I34_RS00430 () | 71461..71745 | + | 285 | WP_001178090.1 | ribbon-helix-helix domain-containing protein | - |
| I6I34_RS00435 () | 71745..72020 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I6I34_RS00440 () | 72126..72407 | + | 282 | WP_001105066.1 | hypothetical protein | - |
| I6I34_RS00445 () | 72599..72865 | - | 267 | WP_000627832.1 | hypothetical protein | - |
| I6I34_RS00450 () | 72865..73323 | - | 459 | WP_077738361.1 | hypothetical protein | - |
| I6I34_RS00455 () | 73500..74687 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| I6I34_RS00460 () | 74687..75052 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| I6I34_RS00465 () | 75244..75846 | - | 603 | WP_000521606.1 | hypothetical protein | - |
| I6I34_RS00470 () | 76022..77074 | - | 1053 | WP_000655519.1 | hypothetical protein | - |
| I6I34_RS00475 () | 77287..77877 | - | 591 | WP_001306774.1 | hypothetical protein | - |
| I6I34_RS00480 () | 77877..78131 | - | 255 | WP_000343107.1 | hypothetical protein | - |
| I6I34_RS00485 () | 78546..79220 | - | 675 | WP_001306775.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|