MGE detailed information
MGE type: IScluster/Tn MGE length: 28639 bp
Accession: NZ_CP068091 Location: 30781..59419 Organism: Shigella boydii strain FDAARGOS_1139 Replicon: plasmid unnamed1
Accession: NZ_CP068091 Location: 30781..59419 Organism: Shigella boydii strain FDAARGOS_1139 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6I96_RS22380 () | 26115..28376 | - | 2262 | WP_001100761.1 | TonB-dependent receptor | - |
| I6I96_RS22385 () | 28545..29321 | - | 777 | WP_000981089.1 | energy transducer TonB | - |
| I6I96_RS22390 () | 29329..30204 | - | 876 | WP_001224619.1 | ChaN family lipoprotein | - |
| I6I96_RS22395 () | 30481..30696 | + | 216 | Protein_33 | IS91 family transposase | - |
| I6I96_RS22400 () | 30763..32109 | + | 1347 | WP_000483764.1 | IS4 family transposase IS4 | Transposase |
| I6I96_RS22405 () | 32123..32413 | + | 291 | Protein_35 | IS91 family transposase ISSbo1 | Transposase |
| I6I96_RS22410 () | 32586..32681 | - | 96 | Protein_36 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| I6I96_RS22415 () | 32681..32764 | - | 84 | Protein_37 | CopG family transcriptional regulator | - |
| I6I96_RS22420 () | 32794..33123 | - | 330 | Protein_38 | Tn3 family transposase TnpA_ISSod9 | Transposase |
| I6I96_RS22425 () | 33208..33573 | + | 366 | WP_000124126.1 | hypothetical protein | - |
| I6I96_RS22430 () | 33573..34760 | + | 1188 | WP_024258531.1 | IS91 family transposase ISEc37 | Transposase |
| I6I96_RS22435 () | 35297..35584 | - | 288 | WP_000865087.1 | helix-turn-helix transcriptional regulator | - |
| I6I96_RS22440 () | 35584..35895 | - | 312 | WP_000483533.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| I6I96_RS22445 () | 36360..37556 | + | 1197 | WP_004983157.1 | IS110 family transposase ISEc20 | Transposase |
| I6I96_RS22450 () | 37789..38486 | + | 698 | Protein_44 | IS1 family transposase IS1X2 | Transposase |
| I6I96_RS22455 () | 38704..38970 | - | 267 | WP_000957717.1 | hypothetical protein | VF |
| I6I96_RS22460 () | 39152..39550 | - | 399 | Protein_46 | IS3 family transposase ISEc48 | Transposase |
| I6I96_RS22465 () | 39873..41000 | - | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| I6I96_RS22470 () | 41130..41413 | - | 284 | Protein_48 | transposase | - |
| I6I96_RS22480 () | 42977..43246 | - | 270 | Protein_50 | IS3 family transposase ISEc48 | Transposase |
| I6I96_RS22485 () | 43414..44626 | - | 1213 | Protein_51 | IS3 family transposase | - |
| I6I96_RS22490 () | 44678..44938 | + | 261 | Protein_52 | IS1 family transposase IS1X2 | Transposase |
| I6I96_RS22495 () | 44978..45097 | - | 120 | Protein_53 | transposase domain-containing protein | - |
| I6I96_RS22500 () | 45323..46915 | - | 1593 | WP_001072385.1 | IS66 family transposase ISEc43 | Transposase |
| I6I96_RS22505 () | 46946..47296 | - | 351 | WP_000624671.1 | IS66 family transposase IS682 | Transposase |
| I6I96_RS22510 () | 47293..47589 | - | 297 | WP_072072579.1 | IS66 family transposase IS682 | Transposase |
| I6I96_RS22515 () | 47676..48844 | + | 1169 | WP_134810631.1 | IS3 family transposase | - |
| I6I96_RS22520 () | 48956..49150 | - | 195 | WP_000872577.1 | hypothetical protein | - |
| I6I96_RS22525 () | 49529..49747 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| I6I96_RS22530 () | 49749..50054 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| I6I96_RS22535 () | 50078..50185 | + | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| I6I96_RS22540 () | 50447..52084 | + | 1638 | WP_039060807.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| I6I96_RS22545 () | 52292..52561 | + | 270 | WP_000079956.1 | hypothetical protein | - |
| I6I96_RS22550 () | 52558..52730 | + | 173 | Protein_64 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| I6I96_RS22555 () | 52794..53491 | - | 698 | Protein_65 | IS1 family transposase IS1X2 | Transposase |
| I6I96_RS22560 () | 53698..53814 | + | 117 | WP_004996477.1 | hypothetical protein | - |
| I6I96_RS22565 () | 54178..55020 | + | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| I6I96_RS22570 () | 55023..56111 | + | 1089 | WP_005059238.1 | putative hexosyltransferase CapU | - |
| I6I96_RS22575 () | 56116..57066 | + | 951 | WP_005059240.1 | virulence factor VirK | - |
| I6I96_RS22580 () | 57131..58075 | + | 945 | WP_005027201.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| I6I96_RS22585 () | 58229..58900 | - | 672 | Protein_71 | IS630 family transposase IS630 | Transposase |
| I6I96_RS22590 () | 58916..59613 | - | 698 | Protein_72 | IS1 family transposase IS1X2 | Transposase |
| I6I96_RS22595 () | 59669..60142 | + | 474 | Protein_73 | conjugal transfer protein TraD | - |
| I6I96_RS22600 () | 60151..60549 | - | 399 | WP_000911318.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| I6I96_RS22605 () | 60549..60776 | - | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| I6I96_RS22610 () | 60861..61277 | + | 417 | WP_171548060.1 | conjugative relaxase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|