MGE detailed information
MGE type: IS/Tn MGE length: 459 bp
Accession: NZ_CP067397 Location: 3133100..3133558 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain LB5000 Replicon: chromosome
Accession: NZ_CP067397 Location: 3133100..3133558 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain LB5000 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB81_RS15200 (3129902) | 3129902..3130486 | - | 585 | WP_001244638.1 | fimbrial protein | - |
| JJB81_RS15205 (3131205) | 3131205..3131837 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| JJB81_RS15210 (3131884) | 3131884..3132420 | - | 537 | WP_001038506.1 | STM3031 family outer membrane protein | - |
| JJB81_RS15215 (3133100) | 3133100..3133558 | - | 459 | WP_000502119.1 | IS200-IS605 family transposase IS200F | Transposase |
| JJB81_RS15220 (3133938) | 3133938..3134336 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| JJB81_RS15225 (3134336) | 3134336..3134563 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| JJB81_RS15230 (3134740) | 3134740..3134991 | + | 252 | WP_001540858.1 | hypothetical protein | - |
| JJB81_RS15235 (3135266) | 3135266..3136072 | + | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| JJB81_RS15245 (3136357) | 3136357..3137115 | - | 759 | WP_000244329.1 | amidase activator ActS | - |
| JJB81_RS15250 (3137380) | 3137380..3137925 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | IS/Tn | TA439 | NC_003197 | 3194324..3194782 | 0 |