MGE detailed information
MGE type: Genomic_island MGE length: 11029 bp
Accession: NZ_CP067397 Location: 2976471..2987499 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain LB5000 Replicon: chromosome
Accession: NZ_CP067397 Location: 2976471..2987499 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain LB5000 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB81_RS14485 (2971742) | 2971742..2972416 | - | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| JJB81_RS14490 (2972406) | 2972406..2973317 | - | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| JJB81_RS14495 (2973317) | 2973317..2974327 | - | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| JJB81_RS14500 (2974327) | 2974327..2974770 | - | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| JJB81_RS14505 (2974748) | 2974748..2976043 | - | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| JJB81_RS14510 (2976040) | 2976040..2976447 | - | 408 | WP_001164066.1 | SPI-1 type III secretion system chaperone SpaK | - |
| JJB81_RS14515 (2976471) | 2976471..2978529 | - | 2059 | Protein_2847 | Invasion protein InvA | VF |
| JJB81_RS14520 (2978554) | 2978554..2979672 | - | 1119 | WP_000612171.1 | Protein MxiC | VF |
| JJB81_RS14525 (2979669) | 2979669..2981357 | - | 1689 | WP_000848113.1 | Protein InvG | VF |
| JJB81_RS14530 (2981354) | 2981354..2982004 | - | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| JJB81_RS14535 (2982461) | 2982461..2982904 | + | 444 | WP_000715092.1 | hypothetical protein | VF |
| JJB81_RS14540 (2983335) | 2983335..2983784 | + | 450 | WP_000381610.1 | membrane protein | - |
| JJB81_RS14545 (2983769) | 2983769..2984116 | + | 348 | WP_001669174.1 | DUF1493 family protein | - |
| JJB81_RS14550 (2984389) | 2984389..2984715 | - | 327 | WP_000393302.1 | hypothetical protein | - |
| JJB81_RS14555 (2984956) | 2984956..2985134 | + | 179 | Protein_2855 | IS3 family transposase | - |
| JJB81_RS14560 (2985404) | 2985404..2985694 | + | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JJB81_RS14565 (2985691) | 2985691..2986218 | + | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JJB81_RS14570 (2986291) | 2986291..2986496 | - | 206 | Protein_2858 | IS5 family transposase ISEcl3 | Transposase |
| JJB81_RS14575 (2986843) | 2986843..2987499 | + | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| JJB81_RS14580 (2987671) | 2987671..2988192 | - | 522 | WP_000858988.1 | hypothetical protein | - |
| JJB81_RS14585 (2988351) | 2988351..2990918 | + | 2568 | WP_210138824.1 | DNA mismatch repair protein MutS | - |
| JJB81_RS14590 (2990974) | 2990974..2991354 | - | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.004 |