MGE detailed information
MGE type: Genomic_island MGE length: 73662 bp
Accession: NZ_CP067342 Location: 3647873..3721534 Organism: Escherichia coli strain ECJXMCRH7 Replicon: chromosome
Accession: NZ_CP067342 Location: 3647873..3721534 Organism: Escherichia coli strain ECJXMCRH7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB06_RS17885 (3643421) | 3643421..3644116 | - | 696 | WP_000370307.1 | LUD domain-containing protein | - |
| JJB06_RS17890 (3644109) | 3644109..3645536 | - | 1428 | WP_000023927.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| JJB06_RS17895 (3645547) | 3645547..3646266 | - | 720 | WP_001102108.1 | heterodisulfide reductase-related iron-sulfur binding cluster | - |
| JJB06_RS17900 (3646793) | 3646793..3647647 | - | 855 | WP_000339594.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| JJB06_RS17905 (3647873) | 3647873..3649198 | + | 1326 | WP_001046307.1 | reactive chlorine resistance oxidoreductase RclA | - |
| JJB06_RS17910 (3649307) | 3649307..3649543 | + | 237 | WP_000474077.1 | reactive chlorine resistance periplasmic protein RclB | - |
| JJB06_RS17915 (3649555) | 3649555..3650148 | + | 594 | WP_001299021.1 | reactive chlorine species resistance protein RclC | - |
| JJB06_RS17920 (3650308) | 3650308..3650436 | - | 129 | Protein_3519 | aldo/keto reductase | - |
| JJB06_RS17925 (3650739) | 3650739..3651497 | + | 759 | Protein_3520 | HTH-type transcriptional activator RhaR | VF |
| JJB06_RS17935 (3652266) | 3652266..3652367 | + | 102 | Protein_3522 | AraC family transcriptional regulator | - |
| JJB06_RS17940 (3652507) | 3652507..3655537 | - | 3031 | Protein_3523 | hypothetical protein | VF |
| JJB06_RS25015 (3656089) | 3656089..3656178 | + | 90 | Protein_3524 | hypothetical protein | - |
| JJB06_RS17945 (3656652) | 3656652..3656753 | + | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| JJB06_RS17950 (3657117) | 3657117..3657380 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| JJB06_RS17955 (3657380) | 3657380..3657520 | + | 141 | WP_024008630.1 | type B 50S ribosomal protein L36 | - |
| JJB06_RS17960 (3657555) | 3657555..3657782 | - | 228 | WP_001147279.1 | protein YkgL | - |
| JJB06_RS17965 (3658605) | 3658605..3659147 | + | 543 | WP_001301257.1 | hypothetical protein | VF |
| JJB06_RS17970 (3659173) | 3659173..3659808 | + | 636 | WP_000150118.1 | hypothetical protein | VF |
| JJB06_RS17975 (3659866) | 3659866..3660534 | + | 669 | WP_000716394.1 | hypothetical protein | VF |
| JJB06_RS17980 (3660560) | 3660560..3663085 | + | 2526 | WP_113403831.1 | hypothetical protein | VF |
| JJB06_RS17985 (3663075) | 3663075..3664718 | + | 1644 | WP_001301239.1 | hypothetical protein | VF |
| JJB06_RS17990 (3664687) | 3664687..3665397 | + | 711 | WP_001301243.1 | hypothetical protein | VF |
| JJB06_RS17995 (3665710) | 3665710..3666039 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| JJB06_RS18000 (3666069) | 3666069..3666281 | - | 213 | WP_000998331.1 | hypothetical protein | - |
| JJB06_RS18005 (3666286) | 3666286..3666900 | - | 615 | WP_001019920.1 | YagU family protein | - |
| JJB06_RS18010 (3667317) | 3667317..3668006 | + | 690 | WP_000070679.1 | aldehyde dehydrogenase iron-sulfur subunit PaoA | - |
| JJB06_RS18015 (3668003) | 3668003..3668959 | + | 957 | WP_000643325.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| JJB06_RS18020 (3668956) | 3668956..3671154 | + | 2199 | WP_113403832.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| JJB06_RS18025 (3671164) | 3671164..3672120 | + | 957 | WP_000122393.1 | molybdenum cofactor insertion chaperone PaoD | - |
| JJB06_RS18030 (3672171) | 3672171..3672509 | + | 339 | Protein_3542 | LysR substrate-binding domain-containing protein | - |
| JJB06_RS18035 (3672797) | 3672797..3674074 | + | 1278 | WP_004009008.1 | hypothetical protein ; Integrase | Integrase |
| JJB06_RS18040 (3674155) | 3674155..3674832 | - | 678 | WP_032259539.1 | hypothetical protein | - |
| JJB06_RS18045 (3674880) | 3674880..3676724 | - | 1845 | WP_032259537.1 | hypothetical protein | - |
| JJB06_RS18050 (3676759) | 3676759..3676956 | - | 198 | WP_072002327.1 | hypothetical protein | - |
| JJB06_RS18055 (3677108) | 3677108..3678139 | - | 1032 | WP_001535837.1 | hypothetical protein | - |
| JJB06_RS18060 (3678154) | 3678154..3678537 | - | 384 | WP_000013184.1 | hypothetical protein | - |
| JJB06_RS18065 (3678542) | 3678542..3678739 | - | 198 | WP_000807036.1 | hypothetical protein | - |
| JJB06_RS18070 (3679724) | 3679724..3680032 | - | 309 | WP_004012241.1 | hypothetical protein | - |
| JJB06_RS18075 (3680032) | 3680032..3680235 | - | 204 | WP_004012243.1 | hypothetical protein | - |
| JJB06_RS18080 (3680335) | 3680335..3680604 | - | 270 | WP_001551599.1 | hypothetical protein | - |
| JJB06_RS18085 (3680614) | 3680614..3681240 | - | 627 | WP_000610007.1 | hypothetical protein | - |
| JJB06_RS18090 (3681292) | 3681292..3681459 | - | 168 | WP_000005054.1 | hypothetical protein | - |
| JJB06_RS18095 (3681482) | 3681482..3681658 | - | 177 | WP_004012251.1 | hypothetical protein | - |
| JJB06_RS25020 (3683725) | 3683725..3684276 | - | 552 | WP_001323651.1 | hypothetical protein | - |
| JJB06_RS18105 (3684881) | 3684881..3685033 | - | 153 | WP_000788776.1 | hypothetical protein | - |
| JJB06_RS18115 (3685830) | 3685830..3687083 | - | 1254 | WP_000893272.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JJB06_RS18120 (3687095) | 3687095..3688198 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JJB06_RS18125 (3688486) | 3688486..3689541 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| JJB06_RS18130 (3689580) | 3689580..3689981 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3690699) | 3690699..3690779 | - | 81 | NuclAT_13 | - | - |
| - (3690699) | 3690699..3690779 | - | 81 | NuclAT_13 | - | - |
| - (3690699) | 3690699..3690779 | - | 81 | NuclAT_13 | - | - |
| - (3690699) | 3690699..3690779 | - | 81 | NuclAT_13 | - | - |
| JJB06_RS18135 (3690039) | 3690039..3691283 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| JJB06_RS18140 (3691375) | 3691375..3691833 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| JJB06_RS18145 (3692094) | 3692094..3693551 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| JJB06_RS18150 (3693608) | 3693608..3694129 | - | 522 | Protein_3565 | peptide chain release factor H | - |
| JJB06_RS18155 (3694128) | 3694128..3694331 | - | 204 | Protein_3566 | RtcB family protein | - |
| JJB06_RS18160 (3694577) | 3694577..3695029 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| JJB06_RS18165 (3695039) | 3695039..3695437 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JJB06_RS18170 (3695440) | 3695440..3695733 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JJB06_RS18175 (3695785) | 3695785..3696840 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| JJB06_RS18180 (3696911) | 3696911..3697696 | - | 786 | WP_000207564.1 | hypothetical protein | VF |
| JJB06_RS18185 (3697668) | 3697668..3699380 | + | 1713 | Protein_3572 | hypothetical protein | VF |
| JJB06_RS18190 (3699596) | 3699596..3700093 | - | 498 | WP_000006260.1 | REP-associated tyrosine transposase RayT | - |
| JJB06_RS18195 (3700269) | 3700269..3701042 | - | 774 | WP_001353765.1 | hypothetical protein | VF |
| JJB06_RS18200 (3701228) | 3701228..3701488 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| JJB06_RS18205 (3701491) | 3701491..3701769 | + | 279 | WP_000615981.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| JJB06_RS18210 (3701925) | 3701925..3702665 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| JJB06_RS18215 (3702636) | 3702636..3703403 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| JJB06_RS18220 (3703609) | 3703609..3704187 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| JJB06_RS18225 (3704427) | 3704427..3706871 | + | 2445 | WP_000973107.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| JJB06_RS18230 (3706914) | 3706914..3707360 | - | 447 | WP_203170292.1 | Ivy family C-type lysozyme inhibitor | - |
| JJB06_RS18235 (3707541) | 3707541..3708311 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| JJB06_RS18240 (3708352) | 3708352..3709182 | - | 831 | Protein_3583 | ISAs1 family transposase ISEc1 | Transposase |
| JJB06_RS18250 (3709951) | 3709951..3710265 | - | 315 | Protein_3585 | ISAs1 family transposase ISEc1 | Transposase |
| JJB06_RS18255 (3710696) | 3710696..3711088 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| JJB06_RS18260 (3711066) | 3711066..3712475 | - | 1410 | Protein_3587 | hypothetical protein | VF |
| JJB06_RS18265 (3712475) | 3712475..3713986 | + | 1512 | Protein_3588 | hypothetical protein | VF |
| JJB06_RS18270 (3713997) | 3713997..3715446 | + | 1450 | Protein_3589 | hypothetical protein | VF |
| JJB06_RS18275 (3715373) | 3715373..3715855 | + | 483 | WP_001284199.1 | hypothetical protein | VF |
| JJB06_RS18280 (3715899) | 3715899..3716813 | + | 915 | WP_000908052.1 | hypothetical protein | - |
| JJB06_RS18285 (3716823) | 3716823..3717302 | + | 480 | WP_113403945.1 | protein YkfM | - |
| JJB06_RS18290 (3717439) | 3717439..3718224 | - | 786 | WP_001053631.1 | hypothetical protein | - |
| JJB06_RS18300 (3718763) | 3718763..3719494 | - | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| JJB06_RS18305 (3719559) | 3719559..3720026 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| JJB06_RS18310 (3720023) | 3720023..3720745 | - | 723 | WP_001297210.1 | class I SAM-dependent methyltransferase | - |
| JJB06_RS18315 (3720779) | 3720779..3721534 | + | 756 | WP_001052717.1 | hydroxyacylglutathione hydrolase | - |
| JJB06_RS18320 (3721606) | 3721606..3722964 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| JJB06_RS18325 (3723012) | 3723012..3723608 | - | 597 | Protein_3599 | methyltransferase domain-containing protein | - |
| JJB06_RS18330 (3723639) | 3723639..3724439 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| JJB06_RS18335 (3724680) | 3724680..3725594 | + | 915 | WP_000648577.1 | DNA-binding transcriptional regulator YafC | - |
| JJB06_RS18340 (3725591) | 3725591..3726394 | - | 804 | WP_000997050.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|