MGE detailed information
MGE type: Genomic_island MGE length: 13706 bp
Accession: NZ_CP067311 Location: 640942..654647 Organism: Escherichia coli strain 027_SK3 Replicon: chromosome
Accession: NZ_CP067311 Location: 640942..654647 Organism: Escherichia coli strain 027_SK3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB21_RS03295 (640942) | 640942..641208 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| JJB21_RS03300 (641208) | 641208..642530 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| JJB21_RS03305 (642842) | 642842..643050 | + | 209 | Protein_657 | AraC family transcriptional regulator | - |
| JJB21_RS03310 (643305) | 643305..644531 | + | 1227 | Protein_658 | Nucleoside diphosphate kinase | VF |
| JJB21_RS03315 (644545) | 644545..645075 | + | 531 | WP_000876763.1 | Glycine oxidase | VF |
| JJB21_RS03320 (645088) | 645088..645591 | + | 504 | WP_000825452.1 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B | VF |
| JJB21_RS03325 (645650) | 645650..646564 | + | 915 | WP_000520676.1 | hypothetical protein | VF |
| JJB21_RS03330 (646898) | 646898..649177 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| JJB21_RS03335 (649425) | 649425..649622 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| JJB21_RS03340 (649697) | 649697..650458 | + | 762 | WP_000060493.1 | acid stress response transcriptional regulator YdeO | - |
| JJB21_RS03345 (650860) | 650860..652542 | + | 1683 | WP_001724016.1 | sulfatase | - |
| JJB21_RS03350 (652594) | 652594..653751 | + | 1158 | WP_208771232.1 | anaerobic sulfatase maturase | - |
| JJB21_RS03355 (653717) | 653717..653839 | - | 123 | WP_122985823.1 | hypothetical protein | - |
| JJB21_RS03360 (654042) | 654042..655726 | + | 1685 | Protein_668 | ABC transporter ATP-binding protein/permease | - |
| JJB21_RS03365 (655764) | 655764..658136 | + | 2373 | WP_000832435.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.008 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.008 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.006 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.01 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.008 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.008 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.008 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.008 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.008 |