MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP067311 Location: 2462846..2472197 Organism: Escherichia coli strain 027_SK3 Replicon: chromosome
Accession: NZ_CP067311 Location: 2462846..2472197 Organism: Escherichia coli strain 027_SK3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB21_RS12060 (2458007) | 2458007..2459308 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| JJB21_RS12065 (2459424) | 2459424..2459762 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| JJB21_RS12070 (2459738) | 2459738..2461435 | + | 1698 | WP_000068902.1 | protein-disulfide reductase DsbD | - |
| JJB21_RS12075 (2461472) | 2461472..2462047 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| JJB21_RS12085 (2462846) | 2462846..2464384 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JJB21_RS12090 (2464750) | 2464750..2466084 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JJB21_RS12095 (2466164) | 2466164..2468311 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| JJB21_RS12100 (2468370) | 2468370..2469827 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| JJB21_RS12105 (2470064) | 2470064..2471581 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| JJB21_RS12110 (2471700) | 2471700..2471873 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JJB21_RS12115 (2471901) | 2471901..2472197 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JJB21_RS12120 (2472424) | 2472424..2472696 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| JJB21_RS12125 (2472708) | 2472708..2472938 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| JJB21_RS12130 (2473119) | 2473119..2474750 | + | 1632 | WP_001565376.1 | sensor histidine kinase | - |
| JJB21_RS12135 (2474747) | 2474747..2475466 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.004 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.004 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.004 |