MGE detailed information
MGE type: Prophage MGE length: 96966 bp
Accession: NZ_CP067307 Location: 4213269..4310234 Organism: Escherichia coli strain ABW_A19 Replicon: chromosome
Accession: NZ_CP067307 Location: 4213269..4310234 Organism: Escherichia coli strain ABW_A19 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB22_RS19820 (4208481) | 4208481..4210700 | - | 2220 | WP_021577967.1 | YgiQ family radical SAM protein | - |
| JJB22_RS19825 (4210811) | 4210811..4212223 | - | 1413 | WP_000059395.1 | cell division protein FtsP | - |
| JJB22_RS19830 (4212298) | 4212298..4213035 | - | 738 | WP_000965712.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| JJB22_RS19835 (4213269) | 4213269..4215527 | - | 2259 | WP_001281841.1 | DNA topoisomerase IV subunit A | - |
| JJB22_RS19840 (4215665) | 4215665..4217272 | - | 1608 | WP_021577968.1 | ABC transporter substrate-binding protein | - |
| JJB22_RS19845 (4217405) | 4217405..4217800 | - | 396 | WP_000650107.1 | type II toxin-antitoxin system antitoxin MqsA | Antitoxin Detail |
| JJB22_RS19850 (4217802) | 4217802..4218098 | - | 297 | WP_000415584.1 | type II toxin-antitoxin system toxin MqsR | Toxin Detail |
| JJB22_RS19855 (4218303) | 4218303..4218785 | - | 483 | WP_021577969.1 | GyrI-like domain-containing protein | - |
| JJB22_RS19860 (4218838) | 4218838..4219230 | - | 393 | WP_021577970.1 | OB fold stress tolerance protein YgiW | - |
| JJB22_RS19865 (4219381) | 4219381..4220040 | + | 660 | WP_001221502.1 | hypothetical protein | VF |
| JJB22_RS19870 (4220037) | 4220037..4221386 | + | 1350 | WP_000673376.1 | quorum sensing histidine kinase QseC | - |
| JJB22_RS19875 (4221496) | 4221496..4222077 | + | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| JJB22_RS19880 (4222108) | 4222108..4222422 | + | 315 | WP_000958598.1 | putative quinol monooxygenase | - |
| JJB22_RS19885 (4222481) | 4222481..4224373 | - | 1893 | WP_000195296.1 | DNA topoisomerase IV subunit B | - |
| JJB22_RS19890 (4224402) | 4224402..4224983 | - | 582 | WP_000105733.1 | esterase YqiA | - |
| JJB22_RS19895 (4224983) | 4224983..4225810 | - | 828 | WP_000444747.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| JJB22_RS19900 (4225835) | 4225835..4226257 | - | 423 | WP_000833388.1 | DUF1249 family protein | - |
| JJB22_RS19905 (4226258) | 4226258..4226887 | - | 630 | WP_000917117.1 | ADP-ribose diphosphatase | - |
| JJB22_RS19910 (4227092) | 4227092..4228573 | + | 1482 | WP_000735278.1 | outer membrane channel protein TolC | - |
| JJB22_RS19915 (4228721) | 4228721..4229392 | + | 672 | WP_000831543.1 | DUF1190 family protein | - |
| JJB22_RS19920 (4229398) | 4229398..4230558 | + | 1161 | WP_000442860.1 | glutathionylspermidine synthase family protein | - |
| JJB22_RS19925 (4230596) | 4230596..4231384 | - | 789 | WP_024248398.1 | 4,5-DOPA dioxygenase extradiol | - |
| JJB22_RS19930 (4231527) | 4231527..4232300 | + | 774 | WP_001295627.1 | zinc transporter ZupT | - |
| JJB22_RS19935 (4232358) | 4232358..4232528 | - | 171 | WP_000469266.1 | protein YqiD | - |
| JJB22_RS19940 (4232790) | 4232790..4233443 | - | 654 | WP_021577973.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| JJB22_RS19945 (4233817) | 4233817..4234116 | + | 300 | WP_001298379.1 | ubiquinone biosynthesis accessory factor UbiK | - |
| JJB22_RS19950 (4234151) | 4234151..4234351 | - | 201 | WP_001296424.1 | cell surface composition regulator GlgS | - |
| JJB22_RS19955 (4234620) | 4234620..4235249 | + | 630 | WP_000599926.1 | DUF1449 family protein | - |
| JJB22_RS19960 (4235276) | 4235276..4236937 | + | 1662 | WP_000341034.1 | flotillin family protein | - |
| JJB22_RS19965 (4237176) | 4237176..4237235 | + | 60 | WP_001387081.1 | type I toxin-antitoxin system Ibs family toxin | - |
| - (4237134) | 4237134..4237275 | - | 142 | NuclAT_5 | - | - |
| - (4237134) | 4237134..4237275 | - | 142 | NuclAT_5 | - | - |
| - (4237134) | 4237134..4237275 | - | 142 | NuclAT_5 | - | - |
| - (4237134) | 4237134..4237275 | - | 142 | NuclAT_5 | - | - |
| - (4237134) | 4237134..4237275 | - | 142 | NuclAT_9 | - | - |
| - (4237134) | 4237134..4237275 | - | 142 | NuclAT_9 | - | - |
| - (4237134) | 4237134..4237275 | - | 142 | NuclAT_9 | - | - |
| - (4237134) | 4237134..4237275 | - | 142 | NuclAT_9 | - | - |
| JJB22_RS19970 (4237552) | 4237552..4237611 | + | 60 | WP_010723221.1 | type I toxin-antitoxin system toxin IbsE | - |
| - (4237510) | 4237510..4237651 | - | 142 | NuclAT_10 | - | - |
| - (4237510) | 4237510..4237651 | - | 142 | NuclAT_10 | - | - |
| - (4237510) | 4237510..4237651 | - | 142 | NuclAT_10 | - | - |
| - (4237510) | 4237510..4237651 | - | 142 | NuclAT_10 | - | - |
| - (4237510) | 4237510..4237651 | - | 142 | NuclAT_4 | - | - |
| - (4237510) | 4237510..4237651 | - | 142 | NuclAT_4 | - | - |
| - (4237510) | 4237510..4237651 | - | 142 | NuclAT_4 | - | - |
| - (4237510) | 4237510..4237651 | - | 142 | NuclAT_4 | - | - |
| JJB22_RS19975 (4237731) | 4237731..4239164 | - | 1434 | WP_000869178.1 | hypothetical protein | VF |
| JJB22_RS19980 (4239212) | 4239212..4242052 | - | 2841 | WP_021577974.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| JJB22_RS19985 (4242075) | 4242075..4243376 | - | 1302 | WP_208782390.1 | inorganic triphosphatase | - |
| JJB22_RS19990 (4243618) | 4243618..4244238 | + | 621 | WP_001125331.1 | TIGR04211 family SH3 domain-containing protein | - |
| JJB22_RS19995 (4244302) | 4244302..4245540 | + | 1239 | WP_021577975.1 | fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca | - |
| JJB22_RS20000 (4245721) | 4245721..4246542 | - | 822 | WP_001281927.1 | undecaprenyl-diphosphate phosphatase | - |
| JJB22_RS20005 (4246633) | 4246633..4247001 | - | 369 | WP_001295541.1 | bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | - |
| JJB22_RS20010 (4247106) | 4247106..4247723 | + | 618 | WP_001272796.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| JJB22_RS20015 (4247736) | 4247736..4248668 | - | 933 | WP_000935209.1 | DNA-binding transcriptional activator TtdR | - |
| JJB22_RS20020 (4248875) | 4248875..4249786 | + | 912 | WP_000986806.1 | L(+)-tartrate dehydratase subunit alpha | - |
| JJB22_RS20025 (4249783) | 4249783..4250388 | + | 606 | WP_000722945.1 | L(+)-tartrate dehydratase subunit beta | - |
| JJB22_RS20030 (4250436) | 4250436..4251899 | + | 1464 | WP_080029947.1 | L-tartrate/succinate antiporter | - |
| JJB22_RS20035 (4251942) | 4251942..4252955 | - | 1014 | WP_001264365.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| JJB22_RS20040 (4253193) | 4253193..4253408 | + | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| JJB22_RS20045 (4253519) | 4253519..4255264 | + | 1746 | WP_000918827.1 | DNA primase | - |
| JJB22_RS20050 (4255459) | 4255459..4257300 | + | 1842 | WP_000437371.1 | RNA polymerase sigma factor RpoD | - |
| JJB22_RS20055 (4257379) | 4257379..4257885 | - | 507 | WP_000228930.1 | G/U mismatch-specific DNA glycosylase | - |
| JJB22_RS20065 (4258184) | 4258184..4259029 | - | 846 | WP_001280435.1 | DUF4942 domain-containing protein | - |
| JJB22_RS20070 (4259126) | 4259126..4259323 | - | 198 | WP_000839263.1 | DUF957 domain-containing protein | - |
| JJB22_RS20075 (4259335) | 4259335..4259823 | - | 489 | WP_001177592.1 | DUF5983 family protein | - |
| JJB22_RS20080 (4259814) | 4259814..4260197 | - | 384 | WP_000854822.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| JJB22_RS20085 (4260287) | 4260287..4260655 | - | 369 | WP_053271974.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JJB22_RS20090 (4260735) | 4260735..4260956 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| JJB22_RS20095 (4261025) | 4261025..4261501 | - | 477 | WP_001186747.1 | RadC family protein | - |
| JJB22_RS20100 (4261516) | 4261516..4262001 | - | 486 | WP_000214317.1 | antirestriction protein | - |
| JJB22_RS20105 (4262092) | 4262092..4262910 | - | 819 | WP_001234702.1 | DUF932 domain-containing protein | - |
| JJB22_RS20110 (4263237) | 4263237..4266083 | - | 2847 | WP_040234914.1 | Ag43/Cah family autotransporter adhesin | - |
| JJB22_RS20115 (4266456) | 4266456..4267328 | - | 873 | WP_058343187.1 | GTPase family protein | - |
| JJB22_RS20120 (4267659) | 4267659..4267841 | + | 183 | WP_000282126.1 | hypothetical protein | - |
| JJB22_RS26830 (4268070) | 4268070..4268144 | - | 75 | Protein_3989 | IS66 family transposase ISEc47 | Transposase |
| JJB22_RS20125 (4268141) | 4268141..4268560 | - | 420 | WP_032313936.1 | IS66 family transposase ISEc43 | Transposase |
| JJB22_RS20130 (4268700) | 4268700..4269065 | - | 366 | Protein_3991 | transposase | - |
| JJB22_RS20135 (4269313) | 4269313..4272099 | + | 2787 | WP_001385107.1 | class I SAM-dependent DNA methyltransferase | - |
| JJB22_RS20140 (4272096) | 4272096..4274141 | + | 2046 | WP_001060305.1 | DEAD/DEAH box helicase | - |
| JJB22_RS20145 (4274134) | 4274134..4275312 | + | 1179 | WP_001065546.1 | GIY-YIG nuclease family protein | - |
| JJB22_RS20150 (4275381) | 4275381..4276085 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JJB22_RS20155 (4276229) | 4276229..4276783 | + | 555 | WP_063840321.1 | hypothetical protein | ARG |
| JJB22_RS20160 (4276914) | 4276914..4277744 | + | 831 | WP_001334766.1 | hypothetical protein | ARG |
| JJB22_RS20165 (4277882) | 4277882..4278514 | + | 633 | WP_000186237.1 | hypothetical protein | VF |
| JJB22_RS20170 (4278599) | 4278599..4279051 | + | 453 | WP_001749986.1 | hypothetical protein | ARG |
| JJB22_RS20175 (4279274) | 4279274..4279621 | + | 348 | WP_000679427.1 | hypothetical protein | ARG |
| JJB22_RS20180 (4279615) | 4279615..4280454 | + | 840 | WP_000259031.1 | hypothetical protein | ARG |
| JJB22_RS20185 (4280859) | 4280859..4282400 | + | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| JJB22_RS20190 (4282634) | 4282634..4283473 | + | 840 | Protein_4003 | IS5 family transposase ISEc35 | Transposase |
| JJB22_RS20195 (4283799) | 4283799..4284572 | + | 774 | WP_000359986.1 | hypothetical protein | ARG |
| JJB22_RS20205 (4285054) | 4285054..4285239 | - | 186 | WP_002026779.1 | hypothetical protein | - |
| JJB22_RS20210 (4285288) | 4285288..4286472 | + | 1185 | WP_002001451.1 | IS4 family transposase ISEc29 | Transposase |
| JJB22_RS20215 (4286871) | 4286871..4288346 | + | 1476 | WP_208782391.1 | hypothetical protein | ARG |
| JJB22_RS20220 (4288402) | 4288402..4289286 | + | 885 | WP_000155092.1 | hypothetical protein | ARG |
| JJB22_RS20225 (4289645) | 4289645..4289728 | - | 84 | Protein_4009 | DNA-binding protein | - |
| JJB22_RS20230 (4289821) | 4289821..4291049 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| JJB22_RS20235 (4291020) | 4291020..4291523 | - | 504 | WP_208782393.1 | plasmid replication DNA-binding protein | - |
| JJB22_RS20240 (4291590) | 4291590..4292234 | - | 645 | Protein_4012 | replication initiation protein RepM | - |
| JJB22_RS20245 (4292332) | 4292332..4293312 | + | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| JJB22_RS20250 (4293467) | 4293467..4293559 | - | 93 | Protein_4014 | replication initiation protein | - |
| JJB22_RS20255 (4293607) | 4293607..4294311 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JJB22_RS20260 (4294391) | 4294391..4295377 | + | 987 | WP_208782395.1 | IS3 family transposase IS2 | Transposase |
| JJB22_RS20265 (4295584) | 4295584..4296150 | - | 567 | WP_000287905.1 | inovirus-type Gp2 protein | - |
| JJB22_RS20270 (4296178) | 4296178..4296792 | - | 615 | WP_000628304.1 | inovirus Gp2 family protein | - |
| JJB22_RS20275 (4297174) | 4297174..4297734 | - | 561 | WP_000135718.1 | hypothetical protein | - |
| JJB22_RS20280 (4297956) | 4297956..4298702 | - | 747 | WP_024201514.1 | hypothetical protein | - |
| JJB22_RS20285 (4298765) | 4298765..4298992 | - | 228 | WP_000265818.1 | AlpA family phage regulatory protein | - |
| JJB22_RS20290 (4299772) | 4299772..4301376 | + | 1605 | WP_000256688.1 | hypothetical protein | - |
| JJB22_RS20295 (4301459) | 4301459..4302055 | - | 597 | WP_000268404.1 | hypothetical protein | - |
| JJB22_RS20300 (4302185) | 4302185..4303072 | - | 888 | Protein_4024 | hypothetical protein ; Integrase | Integrase |
| JJB22_RS20305 (4303177) | 4303177..4304385 | + | 1209 | WP_001339175.1 | IS4 family transposase IS10R | Transposase |
| JJB22_RS20310 (4304396) | 4304396..4304839 | - | 444 | Protein_4026 | Arm DNA-binding domain-containing protein | - |
| JJB22_RS20315 (4305135) | 4305135..4305899 | - | 765 | WP_033815008.1 | NADPH-dependent ferric chelate reductase NfeF | - |
| JJB22_RS20320 (4306187) | 4306187..4306810 | + | 624 | WP_000018005.1 | DNA-binding transcriptional regulator NfeR | - |
| JJB22_RS20325 (4306917) | 4306917..4308437 | - | 1521 | WP_000094712.1 | hypothetical protein | VF |
| JJB22_RS20330 (4308855) | 4308855..4310234 | + | 1380 | WP_001297164.1 | hypothetical protein | VF |
| JJB22_RS20335 (4310276) | 4310276..4310608 | - | 333 | WP_000450588.1 | tRNA-binding protein | - |
| JJB22_RS20340 (4310827) | 4310827..4311810 | + | 984 | WP_208782396.1 | transcriptional regulator EbgR | - |
| JJB22_RS20345 (4311994) | 4311994..4315086 | + | 3093 | WP_033815007.1 | beta-galactosidase subunit alpha | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|