MGE detailed information
MGE type: Prophage MGE length: 60714 bp
Accession: NZ_CP067299 Location: 2143045..2203758 Organism: Escherichia coli strain ABW_A33 Replicon: chromosome
Accession: NZ_CP067299 Location: 2143045..2203758 Organism: Escherichia coli strain ABW_A33 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB24_RS10220 (2139148) | 2139148..2140134 | - | 987 | Protein_2021 | diguanylate cyclase | - |
| JJB24_RS10225 (2140207) | 2140207..2140566 | - | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| JJB24_RS10230 (2140566) | 2140566..2141492 | - | 927 | WP_000257409.1 | glutaminase B | - |
| JJB24_RS10235 (2141556) | 2141556..2142944 | - | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| JJB24_RS10240 (2143045) | 2143045..2143926 | + | 882 | WP_000366501.1 | hypothetical protein | VF |
| JJB24_RS10245 (2144004) | 2144004..2145119 | + | 1116 | WP_000258591.1 | putative protein YneK | - |
| JJB24_RS10250 (2145269) | 2145269..2146459 | + | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| JJB24_RS10255 (2146484) | 2146484..2147149 | - | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| JJB24_RS10260 (2147361) | 2147361..2147795 | + | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| JJB24_RS10265 (2147815) | 2147815..2148198 | + | 384 | WP_000091199.1 | hypothetical protein | VF |
| JJB24_RS10270 (2148230) | 2148230..2148448 | + | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| JJB24_RS10275 (2148479) | 2148479..2149377 | - | 899 | Protein_2032 | O-acetylserine/cysteine exporter | - |
| JJB24_RS10280 (2149572) | 2149572..2150759 | + | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| JJB24_RS10285 (2150886) | 2150886..2150981 | + | 96 | WP_000901367.1 | protein MgtS | - |
| JJB24_RS23640 (2150981) | 2150981..2151085 | + | 105 | WP_211180496.1 | protein MgtT | - |
| JJB24_RS10290 (2151200) | 2151200..2152090 | - | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| JJB24_RS10295 (2152345) | 2152345..2152737 | - | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| JJB24_RS10300 (2153013) | 2153013..2153531 | + | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| JJB24_RS10305 (2153575) | 2153575..2155620 | - | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| JJB24_RS10310 (2155757) | 2155757..2156503 | + | 747 | WP_000636571.1 | hypothetical protein | VF |
| JJB24_RS10315 (2156592) | 2156592..2157278 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| JJB24_RS10320 (2157455) | 2157455..2157658 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| JJB24_RS10325 (2157693) | 2157693..2159153 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| JJB24_RS10330 (2159242) | 2159242..2160609 | - | 1368 | Protein_2044 | MHS family MFS transporter | - |
| JJB24_RS10335 (2161130) | 2161130..2161243 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| JJB24_RS10340 (2161312) | 2161312..2161545 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| JJB24_RS10345 (2161862) | 2161862..2162452 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| JJB24_RS10350 (2162550) | 2162550..2163125 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| JJB24_RS23790 (2163125) | 2163125..2164930 | - | 1806 | WP_049254577.1 | phage terminase large subunit family protein | - |
| JJB24_RS10365 (2164905) | 2164905..2165450 | - | 546 | WP_000453611.1 | DNA-packaging protein | - |
| JJB24_RS10370 (2165839) | 2165839..2166072 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| JJB24_RS10375 (2166130) | 2166130..2166540 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| JJB24_RS10380 (2166692) | 2166692..2166865 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| JJB24_RS10385 (2167037) | 2167037..2167267 | - | 231 | WP_000720962.1 | protein YnfN | - |
| JJB24_RS10390 (2167272) | 2167272..2167337 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| JJB24_RS10395 (2167340) | 2167340..2167528 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| JJB24_RS10400 (2167539) | 2167539..2167751 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| JJB24_RS10405 (2168114) | 2168114..2168611 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| JJB24_RS10410 (2168608) | 2168608..2169141 | - | 534 | WP_001092971.1 | lysozyme | - |
| JJB24_RS10415 (2169138) | 2169138..2169449 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| JJB24_RS10420 (2169454) | 2169454..2169669 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| JJB24_RS23645 (2169889) | 2169889..2170059 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| JJB24_RS10425 (2170423) | 2170423..2170638 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| JJB24_RS10430 (2170939) | 2170939..2171151 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| JJB24_RS10435 (2171206) | 2171206..2171295 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| JJB24_RS10440 (2171573) | 2171573..2172325 | - | 753 | WP_001047135.1 | antitermination protein | - |
| JJB24_RS10445 (2172339) | 2172339..2173388 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| JJB24_RS10450 (2173390) | 2173390..2173668 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| JJB24_RS10455 (2173735) | 2173735..2173986 | - | 252 | WP_000980994.1 | protein Rem | - |
| JJB24_RS10460 (2174203) | 2174203..2174358 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| JJB24_RS10465 (2174430) | 2174430..2174717 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| JJB24_RS10470 (2174717) | 2174717..2174956 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| JJB24_RS10475 (2174981) | 2174981..2175286 | + | 306 | WP_001326990.1 | protein YdfV | - |
| JJB24_RS10485 (2176266) | 2176266..2176598 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| JJB24_RS23795 (2177035) | 2177035..2177184 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| JJB24_RS10490 (2177305) | 2177305..2178327 | - | 1023 | Protein_2077 | ISNCY family transposase ISCARN112 | Transposase |
| JJB24_RS10495 (2179117) | 2179117..2179404 | - | 288 | Protein_2078 | hypothetical protein | - |
| JJB24_RS10500 (2179626) | 2179626..2180030 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| JJB24_RS23800 (2180027) | 2180027..2180275 | + | 249 | Protein_2080 | IS66 family insertion sequence element accessory protein TnpB | - |
| JJB24_RS10510 (2180306) | 2180306..2180536 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| JJB24_RS10515 (2180620) | 2180620..2181027 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| JJB24_RS10520 (2181194) | 2181194..2181349 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| JJB24_RS24020 (2181351) | 2181351..2181479 | + | 129 | WP_000344964.1 | protein YdfB | - |
| JJB24_RS10525 (2181509) | 2181509..2181727 | + | 219 | WP_001171942.1 | protein YdfC | - |
| JJB24_RS10530 (2182295) | 2182295..2182483 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| JJB24_RS10535 (2182480) | 2182480..2182671 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| JJB24_RS10540 (2182764) | 2182764..2185235 | + | 2472 | WP_061362252.1 | exonuclease | - |
| JJB24_RS10545 (2185308) | 2185308..2185559 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| JJB24_RS10550 (2185594) | 2185594..2186874 | + | 1281 | WP_000876958.1 | hypothetical protein ; Integrase | Integrase |
| JJB24_RS10560 (2187062) | 2187062..2188081 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| JJB24_RS10565 (2188093) | 2188093..2189307 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| JJB24_RS10570 (2189513) | 2189513..2189839 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| JJB24_RS10575 (2189974) | 2189974..2190315 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| JJB24_RS10580 (2190350) | 2190350..2190910 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| JJB24_RS10585 (2190913) | 2190913..2191623 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| JJB24_RS10590 (2191731) | 2191731..2192036 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| JJB24_RS10595 (2192235) | 2192235..2194661 | + | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| JJB24_RS10600 (2194722) | 2194722..2197145 | + | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| JJB24_RS10605 (2197156) | 2197156..2197773 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| JJB24_RS10610 (2197775) | 2197775..2198629 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| JJB24_RS10615 (2198672) | 2198672..2199286 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| JJB24_RS10620 (2199445) | 2199445..2200737 | + | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| JJB24_RS10625 (2200690) | 2200690..2201385 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| JJB24_RS10630 (2201510) | 2201510..2202730 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| JJB24_RS10635 (2202865) | 2202865..2203758 | - | 894 | WP_001019525.1 | hypothetical protein | VF |
| JJB24_RS10640 (2203865) | 2203865..2205118 | + | 1254 | WP_000091840.1 | MFS transporter | - |
| JJB24_RS10650 (2205542) | 2205542..2205850 | + | 309 | WP_001340364.1 | acid resistance repetitive basic protein Asr | - |
| JJB24_RS10655 (2205943) | 2205943..2206026 | + | 84 | WP_000233090.1 | hypothetical protein | - |
| JJB24_RS10660 (2206126) | 2206126..2206947 | + | 822 | WP_001260865.1 | serine protease | - |
| JJB24_RS10665 (2206986) | 2206986..2207315 | - | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| JJB24_RS10670 (2207302) | 2207302..2207667 | - | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | Prophage | TA75071 | NZ_CP020543 | 2249542..2301270 | 0.007 |