MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP067265 Location: 2462944..2472295 Organism: Escherichia coli strain ABW_S38 Replicon: chromosome
Accession: NZ_CP067265 Location: 2462944..2472295 Organism: Escherichia coli strain ABW_S38 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB13_RS12060 (2458105) | 2458105..2459406 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| JJB13_RS12065 (2459522) | 2459522..2459860 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| JJB13_RS12070 (2459836) | 2459836..2461533 | + | 1698 | WP_000068902.1 | protein-disulfide reductase DsbD | - |
| JJB13_RS12075 (2461570) | 2461570..2462145 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| JJB13_RS12085 (2462944) | 2462944..2464482 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JJB13_RS12090 (2464848) | 2464848..2466182 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JJB13_RS12095 (2466262) | 2466262..2468409 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| JJB13_RS12100 (2468468) | 2468468..2469925 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| JJB13_RS12105 (2470162) | 2470162..2471679 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| JJB13_RS12110 (2471798) | 2471798..2471971 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JJB13_RS12115 (2471999) | 2471999..2472295 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JJB13_RS12120 (2472522) | 2472522..2472794 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| JJB13_RS12125 (2472806) | 2472806..2473036 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| JJB13_RS12130 (2473217) | 2473217..2474848 | + | 1632 | WP_001565376.1 | sensor histidine kinase | - |
| JJB13_RS12135 (2474845) | 2474845..2475564 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.004 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.004 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.004 |