MGE detailed information
MGE type: Genomic_island MGE length: 43306 bp
Accession: NZ_CP067265 Location: 1911058..1954363 Organism: Escherichia coli strain ABW_S38 Replicon: chromosome
Accession: NZ_CP067265 Location: 1911058..1954363 Organism: Escherichia coli strain ABW_S38 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB13_RS09380 (1906162) | 1906162..1906971 | - | 810 | WP_000184938.1 | 2-keto-4-pentenoate hydratase | - |
| JJB13_RS09385 (1906981) | 1906981..1907847 | - | 867 | WP_000222149.1 | alpha/beta fold hydrolase | - |
| JJB13_RS09390 (1907876) | 1907876..1908829 | - | 954 | WP_160455851.1 | 3-carboxyethylcatechol 2,3-dioxygenase | - |
| JJB13_RS09395 (1908831) | 1908831..1910177 | - | 1347 | Protein_1866 | bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | - |
| JJB13_RS09400 (1910180) | 1910180..1910776 | + | 597 | Protein_1867 | IS3-like element ISEc52 family transposase | - |
| JJB13_RS09405 (1911058) | 1911058..1912134 | + | 1077 | WP_000227969.1 | IS110 family transposase ISEc21 | Transposase |
| JJB13_RS09410 (1912151) | 1912151..1912459 | + | 309 | Protein_1869 | integrase core domain-containing protein | - |
| JJB13_RS09415 (1912468) | 1912468..1913655 | - | 1188 | Protein_1870 | IS256 family transposase ISSoEn2 | Transposase |
| JJB13_RS09420 (1913873) | 1913873..1914037 | - | 165 | Protein_1871 | transposase domain-containing protein | - |
| JJB13_RS09425 (1913982) | 1913982..1914245 | - | 264 | WP_001247776.1 | IS66 family transposase ISPpu19 | Transposase |
| JJB13_RS09430 (1914260) | 1914260..1914523 | + | 264 | WP_208771304.1 | hypothetical protein | - |
| JJB13_RS09435 (1914752) | 1914752..1915033 | + | 282 | WP_000643628.1 | helix-turn-helix domain-containing protein | - |
| JJB13_RS09440 (1915068) | 1915068..1915637 | + | 570 | WP_000350435.1 | Spore protein SP21 | VF |
| JJB13_RS09445 (1915743) | 1915743..1918592 | + | 2850 | WP_000101613.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| JJB13_RS09450 (1918592) | 1918592..1918783 | + | 192 | WP_001295707.1 | hypothetical protein | - |
| JJB13_RS09455 (1918844) | 1918844..1920571 | + | 1728 | WP_160455850.1 | FtsH/Yme1/Tma family ATP-dependent metallopeptidase | - |
| JJB13_RS09460 (1920659) | 1920659..1921117 | + | 459 | WP_001275372.1 | Spore protein SP21 | VF |
| JJB13_RS09465 (1921140) | 1921140..1922054 | + | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| JJB13_RS09470 (1922157) | 1922157..1923044 | + | 888 | WP_001005473.1 | heat resistance protein YfdX2 | - |
| JJB13_RS09475 (1923134) | 1923134..1923745 | + | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| JJB13_RS09480 (1923825) | 1923825..1924970 | + | 1146 | WP_001166995.1 | hypothetical protein | - |
| JJB13_RS09485 (1924960) | 1924960..1925400 | + | 441 | WP_000786817.1 | heat resistance system thioredoxin Trx-GI | - |
| JJB13_RS09490 (1925404) | 1925404..1927119 | + | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| JJB13_RS09495 (1927116) | 1927116..1927613 | + | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| JJB13_RS09500 (1927591) | 1927591..1928556 | + | 966 | WP_021553242.1 | zinc metalloprotease HtpX | - |
| JJB13_RS09505 (1928588) | 1928588..1929733 | + | 1146 | WP_208779978.1 | Putative serine protease HhoB | VF |
| JJB13_RS09510 (1929958) | 1929958..1930527 | - | 570 | Protein_1889 | IS5 family transposase ISThi1 | Transposase |
| JJB13_RS09520 (1931649) | 1931649..1932512 | + | 864 | WP_016154552.1 | GTPase family protein | - |
| JJB13_RS09525 (1932604) | 1932604..1933425 | + | 822 | WP_160455852.1 | DUF932 domain-containing protein | - |
| JJB13_RS09530 (1933642) | 1933642..1934343 | + | 702 | WP_021553244.1 | WYL domain-containing protein | - |
| JJB13_RS09535 (1934384) | 1934384..1934620 | + | 237 | WP_001144029.1 | protein YpjK | - |
| JJB13_RS09540 (1934620) | 1934620..1935063 | + | 444 | WP_021553245.1 | lipoprotein YfjS | - |
| JJB13_RS09545 (1935086) | 1935086..1935553 | + | 468 | WP_001385283.1 | protein YkfB | - |
| JJB13_RS09550 (1935630) | 1935630..1935869 | + | 240 | Protein_1896 | DUF905 domain-containing protein | - |
| JJB13_RS09555 (1935967) | 1935967..1936425 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| JJB13_RS09560 (1936441) | 1936441..1936917 | + | 477 | WP_000811693.1 | RadC family protein | - |
| JJB13_RS09565 (1936926) | 1936926..1937147 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| JJB13_RS09570 (1937153) | 1937153..1937482 | + | 330 | WP_062676555.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| JJB13_RS09575 (1937503) | 1937503..1937844 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| JJB13_RS09585 (1938416) | 1938416..1939669 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JJB13_RS09590 (1939681) | 1939681..1940784 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JJB13_RS09595 (1941072) | 1941072..1942127 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| JJB13_RS09600 (1942166) | 1942166..1942567 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (1943285) | 1943285..1943365 | - | 81 | NuclAT_8 | - | - |
| - (1943285) | 1943285..1943365 | - | 81 | NuclAT_8 | - | - |
| - (1943285) | 1943285..1943365 | - | 81 | NuclAT_8 | - | - |
| - (1943285) | 1943285..1943365 | - | 81 | NuclAT_8 | - | - |
| JJB13_RS09605 (1942625) | 1942625..1943869 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| JJB13_RS09610 (1943961) | 1943961..1944419 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| JJB13_RS09615 (1944680) | 1944680..1946137 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| JJB13_RS09620 (1946194) | 1946194..1946715 | - | 522 | Protein_1909 | peptide chain release factor H | - |
| JJB13_RS09625 (1946714) | 1946714..1946917 | - | 204 | Protein_1910 | RtcB family protein | - |
| JJB13_RS09630 (1947163) | 1947163..1947615 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| JJB13_RS09635 (1947625) | 1947625..1948023 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JJB13_RS09640 (1948026) | 1948026..1948319 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JJB13_RS09645 (1948371) | 1948371..1949426 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| JJB13_RS09650 (1949497) | 1949497..1950282 | - | 786 | WP_000207587.1 | Chemotaxis protein LafU | VF |
| JJB13_RS09655 (1950254) | 1950254..1951966 | + | 1713 | Protein_1916 | Flagellar biosynthesis protein FlhA | VF |
| JJB13_RS09660 (1952190) | 1952190..1952687 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| JJB13_RS09665 (1952863) | 1952863..1953612 | - | 750 | WP_208771306.1 | Murein DD-endopeptidase MepH | VF |
| JJB13_RS09670 (1953822) | 1953822..1954082 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| JJB13_RS09675 (1954085) | 1954085..1954363 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| JJB13_RS09680 (1954519) | 1954519..1955259 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| JJB13_RS09685 (1955230) | 1955230..1955997 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| JJB13_RS09690 (1956203) | 1956203..1956781 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|