MGE detailed information
MGE type: Genomic_island MGE length: 27312 bp
Accession: NZ_CP066839 Location: 3887251..3914562 Organism: Escherichia coli strain Ec-RL2-1X Replicon: chromosome
Accession: NZ_CP066839 Location: 3887251..3914562 Organism: Escherichia coli strain Ec-RL2-1X Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JH656_RS19145 (3882754) | 3882754..3883155 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3883873) | 3883873..3883953 | - | 81 | NuclAT_13 | - | - |
| - (3883873) | 3883873..3883953 | - | 81 | NuclAT_13 | - | - |
| - (3883873) | 3883873..3883953 | - | 81 | NuclAT_13 | - | - |
| - (3883873) | 3883873..3883953 | - | 81 | NuclAT_13 | - | - |
| JH656_RS19150 (3883213) | 3883213..3884457 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| JH656_RS19155 (3884549) | 3884549..3885007 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| JH656_RS19160 (3885268) | 3885268..3886725 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| JH656_RS19165 (3886782) | 3886782..3887303 | - | 522 | Protein_3754 | peptide chain release factor H | - |
| JH656_RS19170 (3887302) | 3887302..3887505 | - | 204 | Protein_3755 | RtcB family protein | - |
| JH656_RS19175 (3887751) | 3887751..3888203 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| JH656_RS19180 (3888213) | 3888213..3888611 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JH656_RS19185 (3888614) | 3888614..3888907 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JH656_RS19190 (3888959) | 3888959..3890014 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| JH656_RS19195 (3890085) | 3890085..3890870 | - | 786 | WP_000207564.1 | hypothetical protein | VF |
| JH656_RS19200 (3890842) | 3890842..3892554 | + | 1713 | Protein_3761 | hypothetical protein | VF |
| JH656_RS19205 (3892770) | 3892770..3893267 | - | 498 | WP_000006260.1 | REP-associated tyrosine transposase RayT | - |
| JH656_RS19210 (3893443) | 3893443..3894216 | - | 774 | WP_001353765.1 | hypothetical protein | VF |
| JH656_RS19215 (3894402) | 3894402..3894662 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| JH656_RS19220 (3894665) | 3894665..3894943 | + | 279 | WP_000615981.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| JH656_RS19225 (3895099) | 3895099..3895839 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| JH656_RS19230 (3895810) | 3895810..3896577 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| JH656_RS19235 (3896783) | 3896783..3897361 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| JH656_RS19240 (3897601) | 3897601..3900045 | + | 2445 | WP_000973107.1 | hypothetical protein | VF |
| JH656_RS19245 (3900088) | 3900088..3900534 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| JH656_RS19250 (3900715) | 3900715..3901485 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| JH656_RS19255 (3901526) | 3901526..3902662 | - | 1137 | WP_032295507.1 | ISAs1 family transposase ISEc1 | Transposase |
| JH656_RS19260 (3903093) | 3903093..3903485 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| JH656_RS19265 (3903463) | 3903463..3904872 | - | 1410 | Protein_3774 | hypothetical protein | VF |
| JH656_RS19270 (3904873) | 3904873..3905250 | + | 378 | Protein_3775 | hypothetical protein | VF |
| JH656_RS19275 (3905285) | 3905285..3905509 | + | 225 | WP_000123970.1 | hypothetical protein | - |
| JH656_RS19280 (3905560) | 3905560..3907035 | + | 1476 | Protein_3777 | hypothetical protein | VF |
| JH656_RS19285 (3907042) | 3907042..3907455 | + | 414 | WP_000611742.1 | hypothetical protein | VF |
| JH656_RS19290 (3907459) | 3907459..3907938 | + | 480 | Protein_3779 | hypothetical protein | VF |
| JH656_RS19295 (3907934) | 3907934..3908474 | + | 541 | Protein_3780 | hypothetical protein | VF |
| JH656_RS19300 (3908401) | 3908401..3908883 | + | 483 | WP_001284199.1 | hypothetical protein | VF |
| JH656_RS19305 (3908927) | 3908927..3909841 | + | 915 | WP_000908052.1 | hypothetical protein | - |
| JH656_RS19310 (3909851) | 3909851..3910330 | + | 480 | WP_001236645.1 | protein YkfM | - |
| JH656_RS19315 (3910467) | 3910467..3911252 | - | 786 | WP_001053631.1 | hypothetical protein | - |
| JH656_RS19325 (3911791) | 3911791..3912522 | - | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| JH656_RS19330 (3912587) | 3912587..3913054 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| JH656_RS19335 (3913051) | 3913051..3913773 | - | 723 | WP_001297210.1 | class I SAM-dependent methyltransferase | - |
| JH656_RS19340 (3913807) | 3913807..3914562 | + | 756 | WP_001052717.1 | hydroxyacylglutathione hydrolase | - |
| JH656_RS19345 (3914634) | 3914634..3915992 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| JH656_RS19350 (3916040) | 3916040..3916636 | - | 597 | Protein_3790 | methyltransferase domain-containing protein | - |
| JH656_RS19355 (3916667) | 3916667..3917467 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| JH656_RS19360 (3917708) | 3917708..3918622 | + | 915 | WP_000648577.1 | DNA-binding transcriptional regulator YafC | - |
| JH656_RS19365 (3918619) | 3918619..3919422 | - | 804 | WP_000997050.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|