MGE detailed information
MGE type: Conjugative plasmid MGE length: 131861 bp
Accession: NZ_CP066807 Location: 1..131861 Organism: Escherichia coli strain TCM3e1 Replicon: plasmid unnamed1
Accession: NZ_CP066807 Location: 1..131861 Organism: Escherichia coli strain TCM3e1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JGU77_RS23785 () | 444..1307 | + | 864 | Protein_1 | Protein ClpV1 | VF |
| JGU77_RS23790 () | 1589..2368 | - | 780 | Protein_2 | IS110 family transposase | - |
| JGU77_RS23795 () | 3061..4185 | + | 1125 | WP_097498093.1 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| JGU77_RS23800 () | 4240..4752 | + | 513 | WP_032186518.1 | hypothetical protein | - |
| JGU77_RS23805 () | 5084..5357 | + | 274 | Protein_5 | hypothetical protein | - |
| JGU77_RS23810 () | 5462..5610 | + | 149 | Protein_6 | transposase | - |
| JGU77_RS23815 () | 6117..6335 | + | 219 | WP_097498106.1 | hypothetical protein | - |
| JGU77_RS23820 () | 6332..7083 | - | 752 | Protein_8 | transposase | - |
| JGU77_RS23825 () | 7269..7966 | - | 698 | Protein_9 | IS1 family transposase IS1X2 | Transposase |
| JGU77_RS23830 () | 8461..9438 | - | 978 | WP_032186847.1 | RepB family plasmid replication initiator protein | - |
| JGU77_RS23835 () | 10427..11138 | - | 712 | Protein_11 | IS6 family transposase IS15DI | Transposase |
| JGU77_RS23840 () | 11207..11647 | + | 441 | Protein_12 | ISNCY family transposase ISKpn21 | Transposase |
| JGU77_RS23845 () | 11890..12753 | - | 864 | WP_000902059.1 | toll/interleukin-1 receptor domain-containing protein | - |
| JGU77_RS23850 () | 12770..13135 | - | 366 | WP_050427582.1 | hypothetical protein | - |
| JGU77_RS23855 () | 13584..14302 | - | 719 | Protein_15 | IS6 family transposase IS15DI | Transposase |
| JGU77_RS23860 () | 14368..14799 | + | 432 | WP_001707302.1 | hypothetical protein | - |
| JGU77_RS23865 () | 14796..15587 | + | 792 | WP_000016494.1 | site-specific integrase | - |
| JGU77_RS23870 () | 15725..16000 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| JGU77_RS23875 () | 15994..16638 | - | 645 | WP_000633913.1 | AAA family ATPase | - |
| JGU77_RS23880 () | 16867..17838 | + | 972 | WP_001103690.1 | hypothetical protein | - |
| JGU77_RS23885 () | 17843..18235 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| JGU77_RS23890 () | 18240..19511 | - | 1272 | WP_000457518.1 | Y-family DNA polymerase | - |
| JGU77_RS23895 () | 19511..19948 | - | 438 | WP_097498060.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JGU77_RS23900 () | 19945..20193 | - | 249 | WP_000618105.1 | DinI-like family protein | - |
| JGU77_RS23905 () | 20611..21546 | + | 936 | Protein_25 | DUF1281 domain-containing protein | - |
| JGU77_RS23910 () | 21778..22008 | + | 231 | WP_072131853.1 | hypothetical protein | - |
| JGU77_RS23915 () | 22060..23421 | + | 1362 | WP_097498058.1 | DUF3560 domain-containing protein | - |
| JGU77_RS23920 () | 23469..24032 | + | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| JGU77_RS23925 () | 24058..24279 | + | 222 | WP_042111886.1 | hypothetical protein | - |
| JGU77_RS23930 () | 24690..24896 | + | 207 | WP_000275853.1 | hypothetical protein | - |
| JGU77_RS23935 () | 24922..25461 | + | 540 | WP_097498141.1 | single-stranded DNA-binding protein | - |
| JGU77_RS23940 () | 25524..25758 | + | 235 | Protein_32 | DUF905 family protein | - |
| JGU77_RS23945 () | 25824..27782 | + | 1959 | WP_000117163.1 | ParB/RepB/Spo0J family partition protein | - |
| JGU77_RS23950 () | 27837..28271 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| JGU77_RS23955 () | 28268..28987 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 28999..29223 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 28999..29223 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 28999..29223 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 28999..29223 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| JGU77_RS23960 () | 29267..29425 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| JGU77_RS23965 () | 29726..29930 | - | 205 | Protein_37 | pilus protein | - |
| JGU77_RS23970 () | 30322..30618 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| JGU77_RS23975 () | 30729..31550 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| JGU77_RS23980 () | 31847..32437 | - | 591 | WP_000252683.1 | hypothetical protein | VF |
| JGU77_RS23985 () | 32770..33153 | + | 384 | WP_001151529.1 | relaxosome protein TraM | - |
| JGU77_RS23990 () | 33345..33992 | + | 648 | WP_000332523.1 | transcriptional regulator TraJ family protein | - |
| JGU77_RS23995 () | 34100..34339 | + | 240 | WP_042018283.1 | conjugal transfer relaxosome protein TraY | - |
| JGU77_RS24000 () | 34373..34735 | + | 363 | WP_012881131.1 | type IV conjugative transfer system pilin TraA | - |
| JGU77_RS24005 () | 34750..35061 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| JGU77_RS24010 () | 35083..35649 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| JGU77_RS24015 () | 35636..36364 | + | 729 | WP_001230769.1 | type-F conjugative transfer system secretin TraK | - |
| JGU77_RS24020 () | 36364..37791 | + | 1428 | WP_012881130.1 | conjugal transfer protein TraB | - |
| JGU77_RS24025 () | 37781..38371 | + | 591 | WP_012881129.1 | conjugal transfer protein TraP | - |
| JGU77_RS24030 () | 38310..38678 | + | 369 | WP_001681801.1 | conjugal transfer protein TrbD | - |
| JGU77_RS24035 () | 38675..39190 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JGU77_RS24040 () | 39325..39546 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| JGU77_RS24045 () | 39539..40015 | + | 477 | WP_012881127.1 | hypothetical protein | - |
| JGU77_RS24050 () | 40114..40332 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| JGU77_RS24055 () | 40360..40707 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| JGU77_RS24060 () | 40833..43463 | + | 2631 | WP_000069772.1 | type IV secretion system protein TraC | - |
| JGU77_RS24065 () | 43460..43846 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| JGU77_RS24070 () | 43843..44475 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| JGU77_RS24075 () | 44472..45464 | + | 993 | WP_000830849.1 | conjugal transfer pilus assembly protein TraU | - |
| JGU77_RS24080 () | 45494..45799 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| JGU77_RS24085 () | 45808..46446 | + | 639 | WP_012881126.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JGU77_RS24090 () | 46443..48293 | + | 1851 | WP_012881125.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JGU77_RS24095 () | 48320..48577 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| JGU77_RS24100 () | 48570..49313 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JGU77_RS24105 () | 49327..49668 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| JGU77_RS24110 () | 49649..49984 | - | 336 | WP_000736414.1 | hypothetical protein | - |
| JGU77_RS24115 () | 50065..50349 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JGU77_RS24120 () | 50336..50881 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JGU77_RS24125 () | 50811..51158 | + | 348 | WP_011666494.1 | P-type conjugative transfer protein TrbJ | - |
| JGU77_RS24130 () | 51106..51531 | + | 426 | WP_001348758.1 | F-type conjugal transfer protein TrbF | - |
| JGU77_RS24135 () | 51518..52891 | + | 1374 | WP_139570830.1 | conjugal transfer protein TraH | - |
| JGU77_RS24140 () | 52888..55713 | + | 2826 | WP_139570829.1 | conjugal transfer mating pair stabilization protein TraG | - |
| JGU77_RS24145 () | 55710..56219 | + | 510 | WP_000628111.1 | conjugal transfer entry exclusion protein TraS | - |
| JGU77_RS24150 () | 56233..56964 | + | 732 | WP_012881123.1 | complement resistance protein TraT | - |
| JGU77_RS24155 () | 57167..57904 | + | 738 | WP_012881122.1 | hypothetical protein | - |
| JGU77_RS24160 () | 57955..60207 | + | 2253 | WP_078207383.1 | type IV conjugative transfer system coupling protein TraD | - |
| JGU77_RS24165 () | 60207..65477 | + | 5271 | WP_060578160.1 | Multifunctional conjugation protein TraI | Relaxase |
| JGU77_RS24170 () | 65497..66243 | + | 747 | WP_060578161.1 | conjugal transfer pilus acetylase TraX | - |
| JGU77_RS24175 () | 66302..67162 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| JGU77_RS24180 () | 67265..67825 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| JGU77_RS24185 () | 67954..68166 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| JGU77_RS24190 () | 68411..68872 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| JGU77_RS24195 () | 68918..69127 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| JGU77_RS24200 () | 69165..69755 | + | 591 | WP_033807967.1 | DUF2726 domain-containing protein | - |
| JGU77_RS24205 () | 69910..70383 | + | 474 | WP_016240489.1 | hypothetical protein | - |
| - () | 70526..70585 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 70526..70585 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 70526..70585 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 70526..70585 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| JGU77_RS24210 () | 70630..70779 | + | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| JGU77_RS24215 () | 71064..71312 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| JGU77_RS24220 () | 71557..71631 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| JGU77_RS24225 () | 71624..72481 | + | 858 | WP_000130961.1 | incFII family plasmid replication initiator RepA | - |
| JGU77_RS24230 () | 73182..73394 | + | 213 | WP_032155400.1 | hypothetical protein | - |
| JGU77_RS24235 () | 73509..73817 | - | 309 | Protein_91 | IS91 family transposase ISSbo1 | Transposase |
| JGU77_RS24240 () | 74010..74108 | + | 99 | WP_137491101.1 | transposase | - |
| JGU77_RS24245 () | 74258..74506 | - | 249 | WP_000738203.1 | hypothetical protein | - |
| JGU77_RS24250 () | 74536..75306 | - | 771 | WP_000712166.1 | molybdopterin-dependent oxidoreductase | - |
| JGU77_RS24255 () | 75317..75916 | - | 600 | WP_001177183.1 | cytochrome b/b6 domain-containing protein | - |
| JGU77_RS24260 () | 76058..76780 | + | 723 | WP_001057737.1 | Transcriptional regulatory protein WalR | VF |
| JGU77_RS24265 () | 76777..78249 | + | 1473 | WP_000621194.1 | sensor histidine kinase | - |
| JGU77_RS24270 () | 78627..78794 | - | 168 | Protein_98 | IS110 family transposase | - |
| JGU77_RS24275 () | 78848..79552 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JGU77_RS24280 () | 79607..79822 | + | 216 | Protein_100 | transposase | - |
| JGU77_RS24285 () | 79864..80178 | - | 315 | Protein_101 | IS110 family transposase ISEc45 | Transposase |
| JGU77_RS24290 () | 80239..80427 | + | 189 | Protein_102 | transposase domain-containing protein | - |
| JGU77_RS24295 () | 80466..80615 | + | 150 | Protein_103 | IS3 family transposase | - |
| JGU77_RS24300 () | 80731..81579 | + | 849 | WP_001057995.1 | 3'-5' exonuclease | - |
| JGU77_RS24305 () | 81696..82178 | + | 483 | WP_001337004.1 | hypothetical protein | - |
| JGU77_RS24310 () | 82388..82648 | + | 261 | WP_001545316.1 | hypothetical protein | - |
| JGU77_RS24315 () | 82755..83018 | + | 264 | WP_001089474.1 | hypothetical protein | - |
| JGU77_RS24320 () | 83008..83307 | + | 300 | WP_000119542.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JGU77_RS24325 () | 83665..83940 | + | 276 | WP_000877662.1 | bacteriocin immunity protein | - |
| JGU77_RS24330 () | 84018..85205 | - | 1188 | WP_025999368.1 | MFS transporter | - |
| JGU77_RS24335 () | 85262..86023 | - | 762 | WP_000020504.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| JGU77_RS24340 () | 86023..87060 | - | 1038 | WP_001545318.1 | Hemin transport system permease protein HmuU | VF |
| JGU77_RS24345 () | 87060..88058 | - | 999 | WP_000756334.1 | ABC transporter substrate-binding protein | - |
| JGU77_RS24350 () | 88208..88321 | - | 114 | Protein_114 | transposase | - |
| JGU77_RS24355 () | 88314..88819 | - | 506 | Protein_115 | IS3 family transposase IS3H | Transposase |
| JGU77_RS24360 () | 89253..90233 | + | 981 | WP_000019441.1 | IS5 family transposase ISKpn26 | Transposase |
| JGU77_RS24365 () | 90347..91135 | + | 789 | WP_200403430.1 | Virulence regulon transcriptional activator VirF | VF |
| JGU77_RS24370 () | 91340..91756 | - | 417 | WP_000466682.1 | SdiA-regulated domain-containing protein | - |
| JGU77_RS24375 () | 91967..93195 | + | 1229 | WP_106106641.1 | IS3 family transposase IS2 | Transposase |
| JGU77_RS24380 () | 93526..94011 | - | 486 | WP_182927269.1 | Dr family adhesin structural subunit | - |
| JGU77_RS24385 () | 94125..94541 | - | 417 | WP_001563702.1 | Protein AfaD | VF |
| JGU77_RS24390 () | 94557..97073 | - | 2517 | WP_169254090.1 | F1 capsule-anchoring protein | VF |
| JGU77_RS24395 () | 97136..97888 | - | 753 | WP_000471454.1 | Chaperone protein caf1M | VF |
| JGU77_RS24400 () | 98371..98619 | + | 249 | Protein_124 | IS21 family transposase IS21 | Transposase |
| JGU77_RS24405 () | 98674..99458 | + | 785 | Protein_125 | IS3 family transposase IS629 | Transposase |
| JGU77_RS24410 () | 99521..100225 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JGU77_RS24415 () | 100279..100638 | + | 360 | Protein_127 | Tn3 family transposase TnpR_Tn3 | Transposase |
| JGU77_RS24420 () | 100821..101681 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| JGU77_RS24425 () | 102008..102748 | - | 741 | WP_001066925.1 | IS91 family transposase ISMno23 | Transposase |
| JGU77_RS24430 () | 102869..103057 | - | 189 | WP_097498105.1 | serine/threonine protein kinase | - |
| JGU77_RS24435 () | 103419..104588 | + | 1170 | WP_097498104.1 | hypothetical protein | - |
| JGU77_RS24440 () | 104736..104908 | - | 173 | Protein_132 | IS3 family transposase | - |
| JGU77_RS24445 () | 105354..105626 | - | 273 | WP_097498103.1 | Major pilu subunit operon regulatory protein PapB | VF |
| JGU77_RS24450 () | 106339..107139 | - | 801 | WP_049035578.1 | helix-turn-helix transcriptional regulator | - |
| JGU77_RS24455 () | 107370..107525 | - | 156 | Protein_135 | IS3 family transposase IS2 | Transposase |
| JGU77_RS24460 () | 107803..108225 | - | 423 | Protein_136 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| JGU77_RS24465 () | 108180..108317 | - | 138 | WP_182927271.1 | hypothetical protein | VF |
| JGU77_RS24470 () | 108320..110428 | - | 2109 | WP_097498102.1 | TonB-dependent receptor | - |
| JGU77_RS24475 () | 111182..111343 | - | 162 | WP_123017527.1 | hypothetical protein | - |
| JGU77_RS24480 () | 111352..111454 | - | 103 | Protein_140 | IS110 family transposase | - |
| JGU77_RS24485 () | 111543..112714 | - | 1172 | Protein_141 | Tn3 family transposase | - |
| JGU77_RS24490 () | 113178..113756 | + | 579 | WP_181717158.1 | hypothetical protein | - |
| JGU77_RS24495 () | 113858..114037 | - | 180 | Protein_143 | transposase | - |
| JGU77_RS24500 () | 114819..115295 | + | 477 | WP_032186534.1 | hypothetical protein | VF |
| JGU77_RS24505 () | 115298..116776 | + | 1479 | WP_097498101.1 | hypothetical protein | VF |
| JGU77_RS24510 () | 116798..117295 | + | 498 | WP_097498100.1 | type VI secretion protein | - |
| JGU77_RS24515 () | 117303..117719 | + | 417 | WP_032186531.1 | lysozyme family protein | - |
| JGU77_RS24520 () | 117712..119514 | + | 1803 | WP_097498099.1 | type VI secretion system baseplate subunit TssF | - |
| JGU77_RS24525 () | 119505..120437 | + | 933 | WP_032186529.1 | type VI secretion system baseplate subunit TssG | - |
| JGU77_RS24530 () | 120450..122426 | + | 1977 | WP_097498098.1 | type VI secretion system tip protein VgrG | - |
| JGU77_RS24535 () | 122437..122898 | + | 462 | WP_032186527.1 | hypothetical protein | - |
| JGU77_RS24540 () | 122913..123212 | + | 300 | WP_032186526.1 | PAAR domain-containing protein | - |
| JGU77_RS24545 () | 123216..124295 | + | 1080 | WP_097498097.1 | type VI secretion system protein TssA | - |
| JGU77_RS24550 () | 124302..124853 | + | 552 | WP_032186524.1 | type VI secretion lipoprotein TssJ | - |
| JGU77_RS24555 () | 124872..126251 | + | 1380 | WP_097498096.1 | type VI secretion system baseplate subunit TssK | - |
| JGU77_RS24560 () | 126604..127221 | + | 618 | WP_032186522.1 | DotU family type IV/VI secretion system protein | - |
| JGU77_RS24565 () | 127228..130632 | + | 3405 | WP_181717159.1 | type VI secretion protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|