MGE detailed information
MGE type: Genomic_island MGE length: 18147 bp
Accession: NZ_CP066796 Location: 1824468..1842614 Organism: Erwinia amylovora strain ATCC 15580 Replicon: chromosome
Accession: NZ_CP066796 Location: 1824468..1842614 Organism: Erwinia amylovora strain ATCC 15580 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JGC47_RS08495 () | 1819931..1821205 | - | 1275 | WP_004157525.1 | Glu/Leu/Phe/Val dehydrogenase | - |
| JGC47_RS08500 () | 1821767..1822966 | + | 1200 | WP_004157528.1 | trans-2-enoyl-CoA reductase family protein | - |
| JGC47_RS08505 () | 1823532..1824284 | + | 753 | WP_004157530.1 | hypothetical protein | - |
| JGC47_RS08510 () | 1824650..1824946 | + | 297 | WP_206215645.1 | hypothetical protein | - |
| JGC47_RS08515 () | 1824892..1827039 | + | 2148 | WP_206215646.1 | TonB-dependent receptor | - |
| JGC47_RS08520 () | 1827095..1827382 | - | 288 | WP_004157533.1 | SelT/SelW/SelH family protein | - |
| JGC47_RS08525 () | 1827442..1828107 | - | 666 | WP_004157534.1 | DUF1345 domain-containing protein | - |
| JGC47_RS08530 () | 1828115..1828747 | - | 633 | WP_004157535.1 | putative HTH-type transcriptional regulator | VF |
| JGC47_RS08535 () | 1828853..1829514 | + | 662 | Protein_1656 | DUF3313 domain-containing protein | - |
| JGC47_RS08540 () | 1829594..1830982 | - | 1389 | WP_004157537.1 | phosphatidylinositol-specific phospholipase C | - |
| JGC47_RS08545 () | 1831443..1834907 | + | 3465 | WP_004157538.1 | hypothetical protein | - |
| JGC47_RS08550 () | 1835179..1835388 | + | 210 | WP_004157539.1 | glycine zipper 2TM domain-containing protein | - |
| JGC47_RS08555 () | 1835500..1835976 | + | 477 | WP_004157540.1 | GNAT family N-acetyltransferase | - |
| JGC47_RS08560 () | 1836100..1836849 | + | 750 | WP_004157541.1 | 5'-nucleotidase, lipoprotein e(P4) family | - |
| JGC47_RS08565 () | 1836936..1838408 | - | 1473 | WP_004157542.1 | Catalase | VF |
| JGC47_RS08570 () | 1839201..1839422 | + | 222 | WP_004157544.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JGC47_RS08575 () | 1839419..1839790 | + | 372 | WP_004157545.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| JGC47_RS08580 () | 1840674..1842614 | + | 1941 | WP_004157559.1 | Methyl-accepting chemotaxis protein III | VF |
| JGC47_RS08585 () | 1842740..1843375 | + | 636 | WP_004157562.1 | carbonic anhydrase | - |
| JGC47_RS08590 () | 1843460..1843909 | - | 450 | WP_004157563.1 | DUF4385 domain-containing protein | - |
| JGC47_RS08595 () | 1844340..1845995 | + | 1656 | WP_004162292.1 | malate dehydrogenase (quinone) | - |
| JGC47_RS08600 () | 1846105..1846539 | - | 435 | WP_004157569.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia amylovora ATCC 49946 | Genomic island | TA24688 | NC_013971 | 1858737..1876886 | 0 | |
| Erwinia amylovora strain CTBT3-1 tig00000000 | Genomic island | TA294489 | NZ_NQJO01000001 | 2039450..2055220 | 0.007 |