MGE detailed information
MGE type: Prophage MGE length: 56590 bp
Accession: NZ_CP066753 Location: 2542108..2598697 Organism: Escherichia coli O157:H7 strain ECP19-598 Replicon: chromosome
Accession: NZ_CP066753 Location: 2542108..2598697 Organism: Escherichia coli O157:H7 strain ECP19-598 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JG531_RS12780 () | 2538008..2539228 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| JG531_RS12785 () | 2539353..2540048 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| JG531_RS12790 () | 2540001..2541293 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| JG531_RS12795 () | 2541451..2542065 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| JG531_RS12800 () | 2542108..2542962 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| JG531_RS12805 () | 2542964..2543581 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| JG531_RS12810 () | 2543592..2546015 | - | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| JG531_RS12815 () | 2546076..2548502 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| JG531_RS12820 () | 2548701..2549006 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| JG531_RS12825 () | 2549114..2549824 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| JG531_RS12830 () | 2549827..2550387 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| JG531_RS12835 () | 2550422..2550763 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| JG531_RS12840 () | 2550898..2551224 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| JG531_RS12845 () | 2551994..2552178 | - | 185 | Protein_2507 | DUF3596 domain-containing protein | - |
| JG531_RS12850 () | 2552213..2552464 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| JG531_RS12855 () | 2552537..2555008 | - | 2472 | WP_000048458.1 | exonuclease | - |
| JG531_RS12860 () | 2555101..2555292 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| JG531_RS12865 () | 2555289..2555477 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| JG531_RS12870 () | 2556046..2556264 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| JG531_RS12875 () | 2556336..2556635 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| JG531_RS12880 () | 2556988..2557266 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JG531_RS12885 () | 2557268..2557459 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| JG531_RS12890 () | 2557480..2557851 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| JG531_RS12895 () | 2557949..2558251 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| JG531_RS12900 () | 2558248..2558673 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| JG531_RS12905 () | 2558696..2559658 | + | 963 | Protein_2519 | helix-turn-helix domain-containing protein | - |
| JG531_RS12910 () | 2559665..2560405 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| JG531_RS12915 () | 2560431..2561200 | + | 770 | Protein_2521 | DUF1627 domain-containing protein | - |
| JG531_RS12920 () | 2561216..2561611 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| JG531_RS12925 () | 2561668..2562252 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| JG531_RS12930 () | 2562368..2562472 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| JG531_RS12935 () | 2562718..2562873 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| JG531_RS12940 () | 2563041..2563319 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| JG531_RS12945 () | 2563321..2564370 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| JG531_RS12950 () | 2564383..2564742 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| JG531_RS12955 () | 2564739..2565428 | + | 690 | WP_001059381.1 | antiterminator | - |
| JG531_RS12975 () | 2566066..2566494 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| JG531_RS12980 () | 2566491..2566746 | + | 256 | Protein_2531 | DUF3927 family protein | - |
| JG531_RS12985 () | 2566973..2568823 | + | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| JG531_RS12990 () | 2569263..2569478 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| JG531_RS12995 () | 2569483..2569827 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| JG531_RS13000 () | 2569878..2570411 | + | 534 | WP_000992137.1 | lysozyme | - |
| JG531_RS13005 () | 2570682..2571251 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| JG531_RS13010 () | 2571251..2571397 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| JG531_RS13015 () | 2571625..2571810 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| JG531_RS13020 () | 2572235..2572462 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| JG531_RS13025 () | 2572504..2572869 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| JG531_RS13030 () | 2573159..2573722 | + | 564 | WP_171880321.1 | terminase small subunit | - |
| JG531_RS13035 () | 2573719..2575380 | + | 1662 | WP_001301491.1 | terminase large subunit | - |
| JG531_RS13040 () | 2575444..2577381 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| JG531_RS13045 () | 2577426..2577647 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| JG531_RS13050 () | 2577593..2580094 | + | 2502 | WP_000267292.1 | phage portal protein | - |
| JG531_RS13055 () | 2580174..2580500 | + | 327 | WP_000126019.1 | head-tail connector protein | - |
| JG531_RS13060 () | 2580510..2580860 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| JG531_RS13065 () | 2580857..2581303 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| JG531_RS13070 () | 2581300..2581644 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| JG531_RS13075 () | 2581710..2582426 | + | 717 | WP_001275434.1 | immunoglobulin domain-containing protein | - |
| JG531_RS13080 () | 2582441..2582815 | + | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| JG531_RS13085 () | 2582911..2583120 | + | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| JG531_RS13090 () | 2583168..2586410 | + | 3243 | WP_137325069.1 | phage tail tape measure protein | - |
| JG531_RS13095 () | 2586403..2586744 | + | 342 | WP_171880313.1 | phage tail protein | - |
| JG531_RS13100 () | 2586744..2587442 | + | 699 | WP_001179481.1 | phage minor tail protein L | - |
| JG531_RS13105 () | 2587453..2588196 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| JG531_RS13110 () | 2588142..2588774 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| JG531_RS13115 () | 2589117..2590292 | + | 1176 | WP_001304109.1 | host specificity protein J | - |
| JG531_RS13120 () | 2590244..2592589 | + | 2346 | WP_137325071.1 | host specificity protein J | - |
| JG531_RS13125 () | 2592657..2593256 | + | 600 | WP_001228290.1 | Outer membrane protein X | VF |
| JG531_RS13130 () | 2593408..2594721 | + | 1314 | WP_171880322.1 | ISNCY family transposase KIS | Transposase |
| JG531_RS13135 () | 2594723..2594992 | + | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| JG531_RS13140 () | 2595105..2595679 | + | 575 | Protein_2563 | hypothetical protein | VF |
| JG531_RS13145 () | 2596019..2597344 | - | 1326 | WP_001025672.1 | hypothetical protein | VF |
| JG531_RS13150 () | 2598005..2598919 | - | 915 | Protein_2565 | Tyrosine recombinase XerD ; Integrase | Integrase |
| JG531_RS13155 () | 2598942..2599064 | + | 123 | WP_106409364.1 | phage tail fiber C-terminal domain-containing protein | - |
| JG531_RS13160 () | 2599171..2600082 | + | 912 | WP_000950979.1 | type III secretion system effector kinase NleH1-2 | - |
| JG531_RS13165 () | 2600148..2600717 | + | 570 | WP_000938103.1 | T3SS effector caspase inhibitor NleF | - |
| JG531_RS13170 () | 2600764..2601398 | - | 635 | Protein_2569 | transposase | - |
| JG531_RS13175 () | 2601683..2603221 | - | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| JG531_RS13180 () | 2603271..2603618 | - | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | Prophage | TA20321 | NC_002655 | 2282958..2329636 | 0.008 |