MGE detailed information
MGE type: Conjugative plasmid MGE length: 95679 bp
Accession: NZ_CP066749 Location: 1..95679 Organism: Escherichia coli O157:H7 strain ECP19-2498 Replicon: plasmid unnamed1
Accession: NZ_CP066749 Location: 1..95679 Organism: Escherichia coli O157:H7 strain ECP19-2498 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JG532_RS27505 () | 1..459 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| JG532_RS27510 () | 456..1274 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| JG532_RS27515 () | 1271..2419 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| JG532_RS27520 () | 2416..2706 | + | 291 | WP_001372180.1 | hypothetical protein | - |
| JG532_RS27525 () | 2721..3272 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| JG532_RS27530 () | 3362..7129 | + | 3768 | WP_001141542.1 | DNA primase | - |
| JG532_RS27535 () | 7147..7494 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| JG532_RS27540 () | 7491..8183 | + | 693 | WP_000138551.1 | DotI/IcmL family type IV secretion protein | - |
| JG532_RS27545 () | 8194..9177 | + | 984 | WP_001191879.1 | hypothetical protein | VF |
| JG532_RS27550 () | 9180..10469 | + | 1290 | WP_001272000.1 | conjugal transfer protein TraO | - |
| JG532_RS27555 () | 10469..11173 | + | 705 | WP_000801919.1 | IncI1-type conjugal transfer protein TraP | - |
| JG532_RS27560 () | 11173..11700 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| JG532_RS27565 () | 11751..12155 | + | 405 | WP_000086959.1 | IncI1-type conjugal transfer protein TraR | - |
| JG532_RS27570 () | 12219..12407 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| JG532_RS27575 () | 12391..13191 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| JG532_RS27580 () | 13281..16325 | + | 3045 | WP_001024782.1 | IncI1-type conjugal transfer protein TraU | - |
| JG532_RS27585 () | 16325..16939 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| JG532_RS27590 () | 16906..18108 | + | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| JG532_RS27595 () | 18137..18721 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| JG532_RS27600 () | 18818..20986 | + | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| JG532_RS27605 () | 21060..21710 | + | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| JG532_RS27610 () | 21782..21991 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| JG532_RS27615 () | 22383..22559 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| JG532_RS27620 () | 23218..23469 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| JG532_RS27625 () | 23541..23693 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - () | 23748..23805 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 23748..23805 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 23748..23805 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 23748..23805 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| JG532_RS27630 () | 23985..25193 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| JG532_RS27635 () | 25212..26282 | + | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| JG532_RS27640 () | 26275..28566 | + | 2292 | WP_001289282.1 | hypothetical protein | - |
| JG532_RS27645 () | 28603..31302 | - | 2700 | WP_001405892.1 | Protein TraI | Relaxase |
| JG532_RS27650 () | 31313..31645 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| JG532_RS27655 () | 31879..32214 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| JG532_RS27660 () | 32300..33148 | - | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| JG532_RS27665 () | 33497..33694 | + | 198 | WP_001161115.1 | hypothetical protein | - |
| JG532_RS27670 () | 33728..33979 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| JG532_RS27675 () | 34010..34207 | - | 198 | WP_001348086.1 | hypothetical protein | - |
| JG532_RS27680 () | 34230..35144 | - | 915 | WP_000038401.1 | Recombination-promoting nuclease RpnA | VF |
| JG532_RS27685 () | 35209..35475 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| JG532_RS27690 () | 35569..36003 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| JG532_RS27695 () | 36293..36592 | + | 300 | WP_001348082.1 | hypothetical protein | - |
| JG532_RS27700 () | 36732..37232 | - | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| JG532_RS27705 () | 37694..38290 | - | 597 | WP_000977995.1 | hypothetical protein | - |
| JG532_RS27710 () | 38287..39006 | - | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| JG532_RS27715 () | 39003..39437 | - | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| JG532_RS27720 () | 39492..41450 | - | 1959 | WP_199556599.1 | ParB/RepB/Spo0J family partition protein | - |
| JG532_RS27725 () | 41509..41742 | - | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| JG532_RS27730 () | 41800..42327 | - | 528 | WP_001276107.1 | single-stranded DNA-binding protein | - |
| JG532_RS27735 () | 42711..43025 | - | 315 | WP_001434357.1 | hypothetical protein | - |
| JG532_RS27740 () | 43096..43287 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| JG532_RS27745 () | 43284..43706 | - | 423 | WP_001619601.1 | DUF1380 family protein | - |
| JG532_RS27750 () | 43753..44055 | - | 303 | WP_010891293.1 | antirestriction protein | - |
| JG532_RS27755 () | 44591..45367 | - | 777 | WP_001005023.1 | hypothetical protein | - |
| JG532_RS27760 () | 45413..45848 | - | 436 | Protein_51 | DUF1380 domain-containing protein | - |
| JG532_RS27765 () | 45862..46083 | - | 222 | WP_001104881.1 | hypothetical protein | - |
| JG532_RS27770 () | 46084..46766 | - | 683 | Protein_53 | DNA methylase | - |
| JG532_RS27775 () | 46842..47153 | - | 312 | WP_031942433.1 | hypothetical protein | - |
| JG532_RS27780 () | 47150..48052 | - | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| JG532_RS27785 () | 48470..48718 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| JG532_RS27790 () | 48715..49152 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JG532_RS27795 () | 49152..50426 | + | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| JG532_RS27800 () | 50428..50844 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| JG532_RS27805 () | 50837..51817 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| JG532_RS27810 () | 52230..52538 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| JG532_RS27815 () | 52625..53269 | - | 645 | WP_001144036.1 | ParA family protein | - |
| JG532_RS27820 () | 53449..54228 | - | 780 | WP_001164201.1 | site-specific integrase | - |
| JG532_RS27825 () | 54230..54643 | - | 414 | WP_000465043.1 | hypothetical protein | - |
| JG532_RS27830 () | 55212..55466 | + | 255 | WP_000343103.1 | hypothetical protein | - |
| JG532_RS27835 () | 55466..56056 | + | 591 | WP_000194572.1 | hypothetical protein | - |
| JG532_RS27840 () | 56076..56423 | - | 348 | WP_001582578.1 | hypothetical protein | - |
| JG532_RS27845 () | 56552..56887 | + | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| JG532_RS27850 () | 56909..58789 | - | 1881 | WP_001619592.1 | colicin 1A | - |
| JG532_RS27855 () | 59261..60121 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| JG532_RS27860 () | 60304..60861 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| JG532_RS27865 () | 61025..64030 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JG532_RS27870 () | 63954..65369 | - | 1416 | WP_029397060.1 | hypothetical protein | - |
| JG532_RS27875 () | 65723..66325 | + | 603 | WP_000517695.1 | hypothetical protein | - |
| JG532_RS27880 () | 66381..66875 | + | 495 | WP_001582574.1 | hypothetical protein | - |
| JG532_RS27885 () | 66875..67141 | + | 267 | WP_000627829.1 | hypothetical protein | - |
| JG532_RS27890 () | 67336..67614 | - | 279 | WP_001105069.1 | hypothetical protein | - |
| JG532_RS27895 () | 67923..69458 | + | 1536 | WP_023181050.1 | IS21 family transposase ISSso4 | Transposase |
| JG532_RS27900 () | 69475..70230 | + | 756 | WP_001282653.1 | IS21 family transposase ISSso4 | Transposase |
| JG532_RS27905 () | 70363..70638 | - | 276 | WP_001582571.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JG532_RS27910 () | 70638..70922 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| JG532_RS27915 () | 71830..72861 | - | 1032 | WP_000907861.1 | replication initiation protein | - |
| JG532_RS27920 () | 73834..74097 | + | 264 | WP_001324596.1 | ash family protein | - |
| JG532_RS27925 () | 74015..74302 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| JG532_RS27930 () | 74744..75277 | + | 534 | WP_001306770.1 | transcription termination factor NusG | - |
| JG532_RS27935 () | 75530..76213 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| JG532_RS27940 () | 76386..76937 | + | 552 | WP_000744646.1 | hypothetical protein | - |
| JG532_RS27945 () | 77099..77353 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| JG532_RS27950 () | 77520..77816 | + | 297 | WP_000494780.1 | hypothetical protein | - |
| JG532_RS27955 () | 78735..79802 | + | 1068 | WP_001360287.1 | hypothetical protein | VF |
| JG532_RS27960 () | 79802..80239 | + | 438 | WP_000539806.1 | hypothetical protein | VF |
| JG532_RS27965 () | 80253..81935 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| JG532_RS27970 () | 81928..83223 | + | 1296 | WP_000752780.1 | type 4b pilus protein PilO2 | - |
| JG532_RS27975 () | 83210..83662 | + | 453 | WP_001247337.1 | hypothetical protein | VF |
| JG532_RS27980 () | 83673..85226 | + | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| JG532_RS27985 () | 85239..86324 | + | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| JG532_RS27990 () | 86341..86955 | + | 615 | WP_000908226.1 | hypothetical protein | VF |
| JG532_RS27995 () | 86965..87525 | + | 561 | WP_000014005.1 | hypothetical protein | VF |
| JG532_RS28000 () | 87510..88166 | + | 657 | WP_001193549.1 | hypothetical protein | VF |
| JG532_RS28005 () | 88166..89458 | + | 1293 | WP_001619585.1 | hypothetical protein | VF |
| JG532_RS28010 () | 89455..89703 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| JG532_RS28015 () | 90872..91090 | - | 219 | WP_071527775.1 | shufflon protein D' | - |
| JG532_RS28020 () | 91139..91225 | - | 87 | Protein_103 | shufflon protein D' | - |
| JG532_RS28025 () | 91224..92378 | + | 1155 | WP_001139958.1 | integrase | - |
| JG532_RS28030 () | 92529..93353 | + | 825 | WP_001545755.1 | hypothetical protein | - |
| JG532_RS28035 () | 93439..94641 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| JG532_RS28040 () | 94701..95285 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|