MGE detailed information
MGE type: Prophage MGE length: 73771 bp
Accession: NZ_CP066492 Location: 1874070..1947840 Organism: Staphylococcus aureus strain nan_175_F371_ch Replicon: chromosome
Accession: NZ_CP066492 Location: 1874070..1947840 Organism: Staphylococcus aureus strain nan_175_F371_ch Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JF380_RS09070 () | 1869883..1870629 | - | 747 | WP_072361841.1 | S9 family peptidase | - |
| JF380_RS09075 () | 1870634..1871107 | - | 474 | WP_000672015.1 | nucleoside triphosphatase YtkD | - |
| JF380_RS09080 () | 1871173..1871430 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| JF380_RS09085 () | 1871427..1872428 | - | 1002 | WP_000778537.1 | o-succinylbenzoate synthase | - |
| JF380_RS09090 () | 1872433..1873911 | - | 1479 | WP_000348369.1 | o-succinylbenzoate--CoA ligase | - |
| JF380_RS09095 () | 1874070..1874525 | - | 456 | WP_072361838.1 | DUF4909 domain-containing protein | - |
| JF380_RS09100 () | 1874828..1875478 | + | 651 | WP_001789021.1 | excalibur calcium-binding domain-containing protein | - |
| JF380_RS09105 () | 1875559..1876554 | + | 996 | WP_000070647.1 | DUF4352 domain-containing protein | - |
| JF380_RS09110 () | 1876630..1877256 | + | 627 | WP_000669019.1 | hypothetical protein | - |
| JF380_RS09115 () | 1877297..1877638 | + | 342 | WP_000627548.1 | DUF3969 family protein | - |
| JF380_RS09120 () | 1877739..1878311 | + | 573 | Protein_1795 | hypothetical protein | - |
| JF380_RS09125 () | 1878509..1879066 | - | 558 | WP_000864138.1 | ImmA/IrrE family metallo-endopeptidase | - |
| JF380_RS09130 () | 1879437..1879613 | - | 177 | WP_000375476.1 | hypothetical protein | - |
| JF380_RS09135 () | 1879624..1880007 | - | 384 | WP_000070811.1 | hypothetical protein | - |
| JF380_RS09140 () | 1880692..1881138 | - | 447 | WP_000747802.1 | DUF1433 domain-containing protein | - |
| JF380_RS09145 () | 1881589..1881684 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| JF380_RS09150 () | 1881807..1881908 | + | 102 | WP_001791232.1 | hypothetical protein | - |
| JF380_RS09155 () | 1881886..1882068 | - | 183 | Protein_1802 | transposase | - |
| JF380_RS09160 () | 1882256..1882642 | - | 387 | WP_198914271.1 | DUF1433 domain-containing protein | - |
| JF380_RS09165 () | 1882631..1882979 | - | 349 | Protein_1804 | DUF1433 domain-containing protein | - |
| JF380_RS09170 () | 1883204..1883644 | - | 441 | Protein_1805 | DUF1433 domain-containing protein | - |
| JF380_RS09175 () | 1884290..1885408 | - | 1119 | WP_000072558.1 | restriction endonuclease subunit S | - |
| JF380_RS09180 () | 1885401..1886957 | - | 1557 | WP_001566696.1 | type I restriction-modification system subunit M | - |
| JF380_RS09185 () | 1887122..1887256 | - | 135 | WP_031865257.1 | hypothetical protein | - |
| JF380_RS09190 () | 1887321..1888040 | - | 720 | WP_001038715.1 | hypothetical protein | VF |
| JF380_RS09195 () | 1888191..1888907 | - | 717 | WP_198914060.1 | hypothetical protein | VF |
| JF380_RS09200 () | 1889009..1889116 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| JF380_RS09205 () | 1889065..1889784 | - | 720 | WP_001038706.1 | hypothetical protein | VF |
| JF380_RS09210 () | 1889905..1890624 | - | 720 | WP_001038867.1 | hypothetical protein | VF |
| JF380_RS09215 () | 1890682..1891404 | - | 723 | WP_001039447.1 | hypothetical protein | VF |
| JF380_RS09220 () | 1891529..1892236 | - | 708 | WP_001039430.1 | hypothetical protein | VF |
| JF380_RS09225 () | 1893197..1893775 | + | 579 | WP_001092769.1 | DUF4888 domain-containing protein | - |
| JF380_RS09230 () | 1894247..1894535 | - | 289 | Protein_1817 | BsaG protein | - |
| JF380_RS09235 () | 1894720..1895191 | + | 472 | Protein_1818 | hypothetical protein | - |
| JF380_RS09240 () | 1895196..1895482 | + | 287 | Protein_1819 | DUF1828 domain-containing protein | - |
| JF380_RS09245 () | 1895578..1895985 | + | 408 | WP_198914061.1 | DUF1829 domain-containing protein | - |
| JF380_RS09250 () | 1896355..1897338 | - | 984 | WP_000782446.1 | hypothetical protein | VF |
| JF380_RS09255 () | 1897340..1898275 | - | 936 | WP_000473594.1 | hypothetical protein | VF |
| JF380_RS09260 () | 1899170..1899598 | + | 429 | Protein_1823 | hypothetical protein | - |
| JF380_RS09265 () | 1899634..1900417 | + | 784 | Protein_1824 | DUF1828 domain-containing protein | - |
| JF380_RS09270 () | 1901633..1901833 | - | 201 | WP_047554484.1 | hypothetical protein | - |
| JF380_RS09275 () | 1901847..1902044 | - | 198 | WP_198914062.1 | XRE family transcriptional regulator | - |
| JF380_RS09280 () | 1902648..1904060 | - | 1413 | WP_198914063.1 | N-acetylmuramoyl-L-alanine amidase | - |
| JF380_RS09285 () | 1904047..1904322 | - | 276 | WP_198914064.1 | phage holin | - |
| JF380_RS09290 () | 1904458..1904757 | - | 300 | WP_198914065.1 | DUF2951 domain-containing protein | - |
| JF380_RS09295 () | 1904803..1904967 | - | 165 | WP_016187456.1 | XkdX family protein | - |
| JF380_RS09300 () | 1904960..1905349 | - | 390 | WP_198914066.1 | DUF2977 domain-containing protein | - |
| JF380_RS09305 () | 1905349..1906815 | - | 1467 | WP_198914067.1 | BppU family phage baseplate upper protein | - |
| JF380_RS09310 () | 1906815..1908725 | - | 1911 | WP_000429551.1 | minor structural protein | - |
| JF380_RS09315 () | 1908741..1909031 | - | 291 | WP_000179860.1 | hypothetical protein | - |
| JF380_RS09320 () | 1909031..1910614 | - | 1584 | WP_198914068.1 | prophage endopeptidase tail family protein | - |
| JF380_RS09325 () | 1910623..1911447 | - | 825 | WP_031775783.1 | phage tail family protein | - |
| JF380_RS09330 () | 1911447..1917623 | - | 6177 | WP_198914069.1 | phage tail tape measure protein | - |
| JF380_RS09335 () | 1917637..1917795 | - | 159 | WP_072437355.1 | hypothetical protein | - |
| JF380_RS09340 () | 1917837..1918187 | - | 351 | WP_198914070.1 | hypothetical protein | - |
| JF380_RS09345 () | 1918245..1918700 | - | 456 | WP_000169126.1 | Ig domain-containing protein | - |
| JF380_RS09350 () | 1918792..1919433 | - | 642 | WP_198914071.1 | phage tail protein | - |
| JF380_RS09355 () | 1919468..1919863 | - | 396 | WP_001023810.1 | DUF3168 domain-containing protein | - |
| JF380_RS09360 () | 1919864..1920265 | - | 402 | WP_198914072.1 | hypothetical protein | - |
| JF380_RS09365 () | 1920262..1920594 | - | 333 | WP_045179098.1 | hypothetical protein | - |
| JF380_RS09370 () | 1920606..1920884 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| JF380_RS09375 () | 1920953..1922116 | - | 1164 | WP_198914073.1 | phage major capsid protein | - |
| JF380_RS09380 () | 1922128..1922901 | - | 774 | WP_115207347.1 | Clp protease ClpP | - |
| JF380_RS09385 () | 1922885..1924123 | - | 1239 | WP_031864146.1 | phage portal protein | - |
| JF380_RS09390 () | 1924128..1925819 | - | 1692 | WP_031927881.1 | terminase large subunit | - |
| JF380_RS09395 () | 1925809..1926114 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| JF380_RS09400 () | 1926241..1926555 | - | 315 | WP_015978060.1 | HNH endonuclease | - |
| JF380_RS09405 () | 1926712..1927149 | - | 438 | WP_015986202.1 | hypothetical protein | - |
| JF380_RS09410 () | 1927162..1928529 | - | 1368 | WP_015986201.1 | DEAD/DEAH box helicase | - |
| JF380_RS09415 () | 1928510..1928770 | - | 261 | WP_198914074.1 | VRR-NUC domain-containing protein | - |
| JF380_RS09420 () | 1928787..1928855 | - | 69 | Protein_1855 | transcriptional regulator | - |
| JF380_RS09425 () | 1928852..1929238 | - | 387 | WP_198914272.1 | hypothetical protein | - |
| JF380_RS09430 () | 1929239..1929439 | - | 201 | WP_198914075.1 | DUF1381 domain-containing protein | - |
| JF380_RS09435 () | 1929436..1929681 | - | 246 | WP_198914076.1 | hypothetical protein | - |
| JF380_RS09440 () | 1929718..1930260 | - | 543 | WP_198914077.1 | dUTP pyrophosphatase | - |
| JF380_RS09445 () | 1930253..1930501 | - | 249 | WP_198914078.1 | DUF1024 family protein | - |
| JF380_RS09450 () | 1930494..1930778 | - | 285 | WP_198914079.1 | hypothetical protein | - |
| JF380_RS09455 () | 1930966..1931346 | - | 381 | WP_198914080.1 | hypothetical protein | - |
| JF380_RS09460 () | 1931349..1931555 | - | 207 | WP_198914081.1 | hypothetical protein | - |
| JF380_RS09465 () | 1931569..1932258 | - | 690 | WP_198914082.1 | N-6 DNA methylase | - |
| JF380_RS09470 () | 1932255..1932455 | - | 201 | WP_198914083.1 | hypothetical protein | - |
| JF380_RS09475 () | 1932458..1932715 | - | 258 | WP_198914084.1 | DUF3310 domain-containing protein | - |
| JF380_RS09480 () | 1932716..1933225 | - | 510 | WP_198914085.1 | hypothetical protein | - |
| JF380_RS09485 () | 1933237..1933494 | - | 258 | WP_198914086.1 | helix-turn-helix transcriptional regulator | - |
| JF380_RS09490 () | 1933495..1933680 | - | 186 | WP_198914087.1 | DUF3113 family protein | - |
| JF380_RS09495 () | 1933685..1934089 | - | 405 | WP_198914088.1 | DUF1064 domain-containing protein | - |
| JF380_RS09500 () | 1934099..1934320 | - | 222 | WP_198914089.1 | DUF3269 family protein | - |
| JF380_RS09505 () | 1934323..1934538 | - | 216 | WP_001024406.1 | hypothetical protein | - |
| JF380_RS09510 () | 1934535..1935776 | - | 1242 | WP_198914090.1 | AAA family ATPase | - |
| JF380_RS09515 () | 1935773..1936129 | - | 357 | WP_198914091.1 | hypothetical protein | - |
| JF380_RS09520 () | 1936129..1936884 | - | 756 | WP_198914092.1 | DnaD domain protein | - |
| JF380_RS09525 () | 1936877..1937551 | - | 675 | WP_198914093.1 | hypothetical protein | - |
| JF380_RS09530 () | 1937552..1938103 | - | 552 | WP_031927924.1 | NUMOD4 motif-containing HNH endonuclease | - |
| JF380_RS09535 () | 1938114..1938539 | - | 426 | WP_198914094.1 | single-stranded DNA-binding protein | - |
| JF380_RS09540 () | 1938539..1939177 | - | 639 | WP_001043063.1 | ERF family protein | - |
| JF380_RS09545 () | 1939177..1939656 | - | 480 | WP_198914095.1 | siphovirus Gp157 family protein | - |
| JF380_RS09550 () | 1939649..1939885 | - | 237 | WP_198914096.1 | hypothetical protein | - |
| JF380_RS09555 () | 1939894..1940154 | - | 261 | WP_198914097.1 | DUF1108 family protein | - |
| JF380_RS09560 () | 1940290..1940451 | - | 162 | WP_000048132.1 | DUF1270 family protein | - |
| JF380_RS09565 () | 1940466..1940681 | - | 216 | WP_198914098.1 | DUF771 domain-containing protein | - |
| JF380_RS09570 () | 1940697..1941449 | - | 753 | WP_198914099.1 | phage antirepressor KilAC domain-containing protein | - |
| JF380_RS09575 () | 1941637..1941840 | - | 204 | WP_198914100.1 | hypothetical protein | - |
| JF380_RS09580 () | 1941855..1942298 | - | 444 | WP_198914101.1 | hypothetical protein | - |
| JF380_RS09585 () | 1942310..1942558 | - | 249 | WP_198914102.1 | helix-turn-helix domain-containing protein | - |
| JF380_RS09590 () | 1942718..1943041 | + | 324 | WP_198914103.1 | helix-turn-helix domain-containing protein | - |
| JF380_RS09595 () | 1943054..1943518 | + | 465 | WP_198914273.1 | toxin | Toxin Detail |
| JF380_RS09600 () | 1944397..1944684 | + | 288 | WP_198914104.1 | CPBP family intramembrane metalloprotease | - |
| JF380_RS09605 () | 1944850..1945914 | + | 1065 | WP_198914105.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| JF380_RS09650 () | 1947286..1947840 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| JF380_RS09655 () | 1948162..1949562 | - | 1401 | WP_000167549.1 | protoporphyrinogen oxidase | - |
| JF380_RS09660 () | 1949586..1950509 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| JF380_RS09665 () | 1950567..1951604 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| JF380_RS09670 () | 1951594..1951704 | - | 111 | WP_031866187.1 | hypothetical protein | - |
| JF380_RS09675 () | 1951867..1952370 | + | 504 | WP_000737978.1 | signal transduction protein TRAP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|