MGE detailed information
MGE type: Mobilizable plasmid MGE length: 98897 bp
Accession: NZ_CP066271 Location: 1..98897 Organism: Pseudomonas tremae strain PA-1-10F Replicon: plasmid p1
Accession: NZ_CP066271 Location: 1..98897 Organism: Pseudomonas tremae strain PA-1-10F Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I9H09_RS25950 (I9H09_25850) | 1..1314 | + | 1314 | WP_122347983.1 | replication initiation protein | - |
| I9H09_RS25955 (I9H09_25855) | 1452..1877 | + | 426 | WP_054990107.1 | S24 family peptidase | - |
| I9H09_RS25960 | 2082..2246 | + | 165 | Protein_2 | peptidase S24 | - |
| I9H09_RS25965 (I9H09_25860) | 2313..3475 | + | 1163 | WP_122346372.1 | IS3 family transposase ISPsy24 | Transposase |
| I9H09_RS25970 | 4038..4130 | - | 93 | Protein_4 | SOS response-associated peptidase | - |
| I9H09_RS25975 (I9H09_25865) | 4353..4640 | - | 288 | WP_054990110.1 | hypothetical protein | - |
| I9H09_RS25980 (I9H09_25870) | 4630..5280 | - | 651 | WP_054990109.1 | AAA family ATPase | - |
| I9H09_RS25985 (I9H09_25875) | 5392..5592 | - | 201 | WP_054990108.1 | hypothetical protein | - |
| I9H09_RS25990 (I9H09_25880) | 5929..6339 | - | 411 | WP_016569388.1 | hypothetical protein | - |
| I9H09_RS25995 | 6433..6720 | - | 288 | WP_081032899.1 | hypothetical protein | - |
| I9H09_RS26000 (I9H09_25885) | 6882..7985 | - | 1104 | Protein_10 | Y-family DNA polymerase | - |
| I9H09_RS26005 (I9H09_25890) | 8070..9158 | + | 1089 | WP_080268148.1 | type III secretion system YopJ family effector HopZ2 | - |
| I9H09_RS26010 (I9H09_25895) | 9324..9680 | - | 357 | WP_235662959.1 | hypothetical protein | - |
| I9H09_RS26015 (I9H09_25900) | 10250..10903 | + | 654 | WP_055002489.1 | type III effector HopAZ1 | - |
| I9H09_RS26020 (I9H09_25905) | 10921..11904 | - | 984 | WP_183142466.1 | hypothetical protein | - |
| I9H09_RS26025 (I9H09_25910) | 12128..12853 | - | 726 | WP_235662958.1 | hypothetical protein | - |
| I9H09_RS26030 (I9H09_25915) | 13465..14436 | - | 972 | WP_103391643.1 | AAA family ATPase | - |
| I9H09_RS26035 (I9H09_25920) | 14426..16063 | - | 1638 | WP_221036040.1 | IS481 family transposase ISAzs36 | Transposase |
| I9H09_RS26040 (I9H09_25925) | 16068..16628 | - | 561 | WP_005782565.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| I9H09_RS26045 (I9H09_25930) | 16937..17284 | + | 348 | Protein_19 | Sir2 family NAD-dependent protein deacetylase | - |
| I9H09_RS26050 | 17407..17640 | + | 234 | WP_046463947.1 | BPSL0761 family protein | - |
| I9H09_RS26055 (I9H09_25935) | 17872..18087 | + | 216 | WP_054990115.1 | hypothetical protein | - |
| I9H09_RS26060 (I9H09_25940) | 18131..18445 | + | 315 | WP_054990134.1 | hypothetical protein | - |
| I9H09_RS26065 (I9H09_25945) | 18562..18711 | + | 150 | WP_183142490.1 | hypothetical protein | - |
| I9H09_RS26070 (I9H09_25950) | 19609..21645 | + | 2037 | WP_054990135.1 | hypothetical protein | - |
| I9H09_RS26075 (I9H09_25955) | 21915..22229 | - | 315 | WP_054990116.1 | HU family DNA-binding protein | - |
| I9H09_RS26080 (I9H09_25960) | 22465..22710 | - | 246 | WP_234778529.1 | hypothetical protein | - |
| I9H09_RS26085 (I9H09_25965) | 22870..23850 | + | 981 | WP_248972614.1 | IS5 family transposase ISPa41 | Transposase |
| I9H09_RS26090 (I9H09_25970) | 24065..24382 | + | 318 | Protein_28 | IS5/IS1182 family transposase | - |
| I9H09_RS26095 (I9H09_25975) | 24636..25688 | + | 1053 | WP_147467987.1 | hypothetical protein | - |
| I9H09_RS26100 (I9H09_25980) | 26022..26825 | - | 804 | WP_054990119.1 | IS21 family transposase ISPsy20 | Transposase |
| I9H09_RS26105 (I9H09_25985) | 26818..28295 | - | 1478 | Protein_31 | IS21 family transposase ISPpu27 | Transposase |
| I9H09_RS26110 (I9H09_25990) | 28699..28995 | + | 297 | WP_054990120.1 | coronamic acid biosynthesis protein CmaL | - |
| I9H09_RS26115 (I9H09_25995) | 29367..30347 | - | 981 | WP_054990121.1 | IS5 family transposase ISPa26 | Transposase |
| I9H09_RS26120 (I9H09_26000) | 30444..31509 | - | 1066 | Protein_34 | IS630 family transposase ISPsy1 | Transposase |
| I9H09_RS26125 (I9H09_26005) | 32218..33747 | + | 1530 | WP_054990122.1 | class I adenylate-forming enzyme family protein | - |
| I9H09_RS26130 (I9H09_26010) | 33833..34084 | + | 252 | WP_005894385.1 | acyl carrier protein | - |
| I9H09_RS26135 (I9H09_26015) | 34096..34593 | + | 498 | WP_054990123.1 | hypothetical protein | VF |
| I9H09_RS26140 (I9H09_26020) | 34623..35732 | + | 1110 | WP_005894389.1 | beta-ketoacyl-[acyl-carrier-protein] synthase family protein | - |
| I9H09_RS26145 (I9H09_26025) | 35729..36262 | + | 534 | WP_054990124.1 | hypothetical protein | - |
| I9H09_RS26150 (I9H09_26030) | 36259..37677 | + | 1419 | WP_054990125.1 | class I adenylate-forming enzyme family protein | - |
| I9H09_RS26155 (I9H09_26035) | 37709..45733 | + | 8025 | WP_248972615.1 | hypothetical protein | VF |
| I9H09_RS26160 (I9H09_26040) | 45739..51939 | + | 6201 | WP_236502439.1 | Narbonolide/10-deoxymethynolide synthase PikA1, modules 1 and 2 | VF |
| I9H09_RS26165 (I9H09_26045) | 51936..52379 | + | 444 | WP_054990061.1 | PaaI family thioesterase | - |
| I9H09_RS26170 (I9H09_26050) | 52429..53634 | + | 1206 | WP_054990062.1 | crotonyl-CoA carboxylase/reductase | - |
| I9H09_RS26175 (I9H09_26055) | 53690..54433 | + | 744 | WP_054990063.1 | Thioesterase PikA5 | VF |
| I9H09_RS26180 (I9H09_26060) | 54541..54857 | + | 317 | Protein_46 | transposase | - |
| I9H09_RS26185 (I9H09_26065) | 55362..55961 | + | 600 | WP_054990064.1 | response regulator transcription factor | - |
| I9H09_RS26190 (I9H09_26070) | 55958..57466 | + | 1509 | WP_122346900.1 | HAMP domain-containing sensor histidine kinase | - |
| I9H09_RS26195 (I9H09_26075) | 57664..57840 | + | 177 | WP_162234135.1 | hypothetical protein | - |
| I9H09_RS26200 (I9H09_26080) | 58074..58304 | + | 231 | WP_054990065.1 | hypothetical protein | VF |
| I9H09_RS26205 (I9H09_26085) | 58315..59163 | + | 849 | WP_054990066.1 | alpha/beta fold hydrolase | - |
| I9H09_RS26210 (I9H09_26090) | 59160..60905 | + | 1746 | WP_054990067.1 | L-allo-isoleucine:holo-[CmaA peptidyl-carrier protein] ligase | - |
| I9H09_RS26215 (I9H09_26095) | 60934..61863 | + | 930 | WP_054990068.1 | chlorinating enzyme | - |
| I9H09_RS26220 (I9H09_26100) | 61873..62295 | + | 423 | WP_004666824.1 | coronamic acid synthetase CmaC | - |
| I9H09_RS26225 (I9H09_26105) | 62305..63066 | + | 762 | WP_081032889.1 | Thioesterase PikA5 | VF |
| I9H09_RS26230 (I9H09_26110) | 63072..63710 | + | 639 | WP_054990069.1 | alanyl-tRNA editing protein | - |
| I9H09_RS26235 (I9H09_26115) | 63729..64340 | + | 612 | WP_054990070.1 | hypothetical protein | - |
| I9H09_RS26240 (I9H09_26120) | 64493..64996 | - | 504 | Protein_58 | IS5 family transposase ISPssy | Transposase |
| I9H09_RS26245 (I9H09_26125) | 65258..65518 | + | 261 | WP_122346902.1 | hypothetical protein | - |
| I9H09_RS26250 (I9H09_26130) | 65644..66606 | - | 963 | WP_054990071.1 | tyrosine-type recombinase/integrase | - |
| I9H09_RS26255 (I9H09_26135) | 66928..67176 | + | 249 | WP_054990072.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| I9H09_RS26260 (I9H09_26140) | 67189..67539 | + | 351 | WP_054990073.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I9H09_RS26265 (I9H09_26145) | 67956..68180 | - | 225 | Protein_63 | IS630 family transposase ISPsy25 | Transposase |
| I9H09_RS26275 (I9H09_26155) | 69417..70268 | - | 852 | Protein_65 | IS630 family transposase ISPsy25 | Transposase |
| I9H09_RS26280 (I9H09_26160) | 70577..70741 | - | 165 | WP_081032891.1 | rubredoxin | - |
| I9H09_RS26285 (I9H09_26165) | 70763..71101 | - | 339 | WP_081032892.1 | hypothetical protein | - |
| I9H09_RS26290 (I9H09_26170) | 71119..71832 | - | 714 | WP_234778524.1 | hypothetical protein | - |
| I9H09_RS26295 (I9H09_26175) | 71855..72577 | - | 723 | WP_024691566.1 | hypothetical protein | - |
| I9H09_RS26300 | 72599..73453 | - | 855 | WP_235662928.1 | saccharopine dehydrogenase C-terminal domain-containing protein | - |
| I9H09_RS26305 | 73574..73942 | - | 369 | Protein_71 | saccharopine dehydrogenase NADP-binding domain-containing protein | - |
| I9H09_RS26310 (I9H09_26185) | 74304..74730 | + | 427 | Protein_72 | DUF2778 domain-containing protein | - |
| I9H09_RS26315 (I9H09_26190) | 74730..75017 | + | 288 | WP_122346903.1 | hypothetical protein | - |
| I9H09_RS26320 (I9H09_26195) | 75045..75818 | - | 774 | WP_054990076.1 | HTH-type transcriptional regulator MalT | VF |
| I9H09_RS26325 (I9H09_26200) | 75927..77027 | + | 1101 | WP_054990077.1 | polyamine ABC transporter substrate-binding protein | - |
| I9H09_RS26330 (I9H09_26205) | 77333..77689 | - | 357 | WP_054990128.1 | helix-turn-helix transcriptional regulator | - |
| I9H09_RS26335 (I9H09_26210) | 77935..78468 | + | 534 | WP_054990078.1 | transcription termination/antitermination NusG family protein | - |
| I9H09_RS26340 (I9H09_26215) | 78557..78799 | + | 243 | WP_054990079.1 | hypothetical protein | - |
| I9H09_RS26345 (I9H09_26220) | 78812..79519 | + | 708 | WP_054990080.1 | hypothetical protein | VF |
| I9H09_RS26350 (I9H09_26225) | 79516..79854 | + | 339 | WP_229621135.1 | conjugal transfer protein | - |
| I9H09_RS26355 (I9H09_26230) | 79867..80352 | + | 486 | WP_081032896.1 | VirB3 family type IV secretion system protein | - |
| I9H09_RS26360 (I9H09_26235) | 80258..82756 | + | 2499 | WP_235667922.1 | conjugal transfer protein | - |
| I9H09_RS26365 (I9H09_26240) | 82753..83439 | + | 687 | WP_054990081.1 | P-type DNA transfer protein VirB5 | - |
| I9H09_RS26370 (I9H09_26245) | 83471..83824 | + | 354 | WP_054990082.1 | hypothetical protein | - |
| I9H09_RS26375 (I9H09_26250) | 83835..84767 | + | 933 | WP_054990083.1 | type IV secretion system protein | - |
| I9H09_RS26380 (I9H09_26255) | 84835..85140 | + | 306 | WP_122346904.1 | conjugal transfer protein | - |
| I9H09_RS26385 (I9H09_26260) | 85191..88157 | - | 2967 | WP_236502509.1 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| I9H09_RS26390 (I9H09_26265) | 88161..88721 | - | 561 | WP_122346646.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| I9H09_RS26395 (I9H09_26270) | 88817..89440 | - | 624 | WP_122346645.1 | hypothetical protein | - |
| I9H09_RS26400 (I9H09_26275) | 89658..89930 | + | 273 | WP_015060662.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| I9H09_RS26405 (I9H09_26280) | 89930..90205 | + | 276 | WP_060413327.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I9H09_RS26410 (I9H09_26285) | 90595..91110 | + | 516 | WP_236502508.1 | StbB family protein | - |
| I9H09_RS26415 | 91118..91345 | + | 228 | WP_248972613.1 | hypothetical protein | - |
| I9H09_RS26420 (I9H09_26290) | 91342..91914 | + | 573 | WP_122347984.1 | hypothetical protein | - |
| I9H09_RS26425 (I9H09_26295) | 91941..92480 | - | 540 | WP_054990103.1 | hypothetical protein | - |
| I9H09_RS26430 (I9H09_26300) | 92700..93425 | + | 726 | WP_236502506.1 | relaxosome protein | - |
| I9H09_RS26435 | 93415..94071 | + | 657 | Protein_97 | hypothetical protein | Relaxase |
| I9H09_RS26440 | 94412..94831 | + | 420 | WP_054990105.1 | hypothetical protein | Relaxase |
| I9H09_RS26445 | 95173..97215 | + | 2043 | WP_054990130.1 | hypothetical protein | Relaxase |
| I9H09_RS26450 (I9H09_26310) | 97346..97996 | + | 651 | WP_024690823.1 | AAA family ATPase | - |
| I9H09_RS26455 (I9H09_26315) | 97987..98340 | + | 354 | WP_024668964.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|