MGE detailed information
MGE type: Conjugative plasmid MGE length: 88626 bp
Accession: NZ_CP066034 Location: 1..88626 Organism: Escherichia coli strain FDAARGOS_1059 Replicon: plasmid unnamed2
Accession: NZ_CP066034 Location: 1..88626 Organism: Escherichia coli strain FDAARGOS_1059 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6I16_RS26505 () | 1727..3019 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| I6I16_RS26510 () | 3019..3675 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| I6I16_RS26515 () | 3660..4220 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| I6I16_RS26520 () | 4230..4844 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| I6I16_RS26525 () | 4862..5959 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| I6I16_RS26530 () | 5972..7525 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| I6I16_RS26535 () | 7536..7988 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| I6I16_RS26540 () | 7975..9270 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| I6I16_RS26545 () | 9263..10945 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| I6I16_RS26550 () | 10959..11396 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| I6I16_RS26555 () | 11396..12463 | - | 1068 | WP_044707330.1 | hypothetical protein | VF |
| I6I16_RS26560 () | 13137..13589 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| I6I16_RS26565 () | 13632..13886 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| I6I16_RS26570 () | 14154..14720 | - | 567 | WP_000776428.1 | hypothetical protein | - |
| I6I16_RS26575 () | 14734..15243 | - | 510 | WP_001185234.1 | hypothetical protein | - |
| I6I16_RS26580 () | 15344..15994 | + | 651 | WP_000993956.1 | IS66 family transposase IS679 | Transposase |
| I6I16_RS26585 () | 15994..16341 | + | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| I6I16_RS26590 () | 16361..17932 | + | 1572 | WP_000381456.1 | IS66 family transposase IS679 | Transposase |
| I6I16_RS26595 () | 17962..18129 | - | 168 | Protein_18 | conjugal transfer protein TraC | - |
| I6I16_RS26600 () | 18383..18916 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| I6I16_RS26605 () | 19358..19645 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| I6I16_RS26610 () | 19563..19826 | - | 264 | WP_001324596.1 | ash family protein | - |
| I6I16_RS26615 () | 20799..21830 | + | 1032 | WP_000907875.1 | replication initiation protein | - |
| I6I16_RS26620 () | 22526..22684 | + | 159 | WP_000841008.1 | hypothetical protein | - |
| I6I16_RS26625 () | 22739..23008 | + | 270 | WP_000079940.1 | hypothetical protein | Antitoxin Detail |
| I6I16_RS26630 () | 23005..23286 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I6I16_RS26635 () | 23486..23752 | - | 267 | WP_000627828.1 | hypothetical protein | - |
| I6I16_RS26640 () | 23752..24246 | - | 495 | WP_021561690.1 | hypothetical protein | - |
| I6I16_RS26645 () | 24302..24904 | - | 603 | WP_000517686.1 | hypothetical protein | - |
| I6I16_RS26650 () | 25013..25180 | + | 168 | Protein_29 | hypothetical protein | - |
| I6I16_RS26655 () | 25211..25546 | - | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| I6I16_RS26660 () | 25675..26022 | + | 348 | WP_000142456.1 | hypothetical protein | - |
| I6I16_RS26665 () | 26040..26630 | - | 591 | WP_000198612.1 | hypothetical protein | - |
| I6I16_RS26670 () | 26630..26887 | - | 258 | WP_000343101.1 | hypothetical protein | - |
| I6I16_RS26675 () | 27457..27870 | + | 414 | WP_000465046.1 | hypothetical protein | - |
| I6I16_RS26680 () | 27872..28654 | + | 783 | WP_001164194.1 | site-specific integrase | - |
| I6I16_RS26685 () | 28826..29179 | + | 354 | WP_000864806.1 | colicin M immunity protein | - |
| I6I16_RS26690 () | 29229..30044 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| I6I16_RS26695 () | 30288..30815 | + | 528 | WP_000203287.1 | colicin B immunity protein | - |
| I6I16_RS26700 () | 30833..32368 | - | 1536 | WP_001282377.1 | pore-forming bacteriocin colicin B | - |
| I6I16_RS26705 () | 32809..33321 | + | 513 | WP_021561682.1 | hypothetical protein | - |
| I6I16_RS26710 () | 33473..33823 | - | 351 | WP_024185881.1 | plasmid partitioning/stability family protein | - |
| I6I16_RS26715 () | 33826..34788 | - | 963 | WP_000959879.1 | plasmid segregation protein ParM | - |
| I6I16_RS26720 () | 34990..35301 | + | 312 | WP_032147121.1 | hypothetical protein | - |
| I6I16_RS26725 () | 35377..36060 | + | 684 | WP_044707328.1 | DNA methylase | - |
| I6I16_RS26730 () | 36061..36282 | + | 222 | WP_021560304.1 | hypothetical protein | - |
| I6I16_RS26735 () | 36295..36729 | + | 435 | WP_042957728.1 | DUF1380 family protein | - |
| I6I16_RS26740 () | 36780..37550 | + | 771 | WP_042957730.1 | hypothetical protein | - |
| I6I16_RS26745 () | 38089..38391 | + | 303 | WP_001436678.1 | antirestriction protein | - |
| I6I16_RS26750 () | 38438..38860 | + | 423 | WP_009426926.1 | DUF1380 family protein | - |
| I6I16_RS26755 () | 38857..39048 | + | 192 | WP_023278050.1 | hypothetical protein | - |
| I6I16_RS26760 () | 39119..39433 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| I6I16_RS26765 () | 39815..40342 | + | 528 | WP_001276114.1 | single-stranded DNA-binding protein | - |
| I6I16_RS26770 () | 40400..40633 | + | 234 | WP_000006025.1 | DUF905 domain-containing protein | - |
| I6I16_RS26775 () | 40692..42650 | + | 1959 | WP_077127792.1 | ParB/RepB/Spo0J family partition protein | - |
| I6I16_RS26780 () | 42705..43139 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| I6I16_RS26785 () | 43136..43855 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| I6I16_RS26790 () | 43852..44448 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| I6I16_RS26795 () | 44911..45411 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| I6I16_RS26800 () | 46140..46574 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| I6I16_RS26805 () | 46667..46933 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| I6I16_RS26810 () | 46998..47951 | + | 954 | WP_112081568.1 | Recombination-promoting nuclease RpnA | VF |
| I6I16_RS26815 () | 48013..48219 | + | 207 | WP_021545175.1 | hypothetical protein | VF |
| I6I16_RS26820 () | 48250..48501 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| I6I16_RS26825 () | 48535..48732 | - | 198 | WP_001161115.1 | hypothetical protein | - |
| I6I16_RS26830 () | 49081..49929 | + | 849 | WP_112081569.1 | DUF4942 domain-containing protein | - |
| I6I16_RS26835 () | 50015..50350 | - | 336 | WP_000157083.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| I6I16_RS26840 () | 50582..50914 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| I6I16_RS26845 () | 50925..53624 | + | 2700 | WP_001474686.1 | Protein TraI | Relaxase |
| I6I16_RS26850 () | 53661..55952 | - | 2292 | WP_001289271.1 | hypothetical protein | - |
| I6I16_RS26855 () | 55945..57015 | - | 1071 | WP_063097584.1 | IncI1-type conjugal transfer protein TrbB | - |
| I6I16_RS26860 () | 57034..58242 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 58422..58484 | - | 63 | NuclAT_0 | - | - |
| - () | 58422..58484 | - | 63 | NuclAT_0 | - | - |
| - () | 58422..58484 | - | 63 | NuclAT_0 | - | - |
| - () | 58422..58484 | - | 63 | NuclAT_0 | - | - |
| I6I16_RS26865 () | 58534..58686 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| I6I16_RS26870 () | 58989..59770 | - | 782 | Protein_73 | IS21 family transposase IS100 | Transposase |
| I6I16_RS26875 () | 59767..60789 | - | 1023 | WP_000255946.1 | IS21 family transposase IS100kyp | Transposase |
| I6I16_RS26880 () | 61626..61802 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| I6I16_RS26885 () | 62145..62354 | + | 210 | WP_000062602.1 | HEAT repeat domain-containing protein | - |
| I6I16_RS26890 () | 62426..63088 | - | 663 | WP_000653333.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| I6I16_RS26895 () | 63153..65315 | - | 2163 | WP_112081570.1 | DotA/TraY family protein | - |
| I6I16_RS26900 () | 65412..65996 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| I6I16_RS26905 () | 66025..67227 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| I6I16_RS26910 () | 67194..67808 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| I6I16_RS26915 () | 67808..70852 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| I6I16_RS26920 () | 70942..71742 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| I6I16_RS26925 () | 71726..71914 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| I6I16_RS26930 () | 71978..72382 | - | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| I6I16_RS26935 () | 72433..72960 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| I6I16_RS26940 () | 72960..73664 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| I6I16_RS26945 () | 73664..74953 | - | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| I6I16_RS26950 () | 74956..75939 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| I6I16_RS26955 () | 75950..76642 | - | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| I6I16_RS26960 () | 76639..76986 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| I6I16_RS26965 () | 77004..80771 | - | 3768 | WP_044707317.1 | DNA primase | - |
| I6I16_RS26970 () | 80861..81412 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| I6I16_RS26975 () | 81427..81717 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| I6I16_RS26980 () | 81714..82862 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| I6I16_RS26985 () | 82859..83677 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| I6I16_RS26990 () | 83674..84132 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| I6I16_RS26995 () | 84527..85111 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| I6I16_RS27000 () | 85171..86373 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| I6I16_RS27005 () | 86458..87282 | - | 825 | WP_044707315.1 | hypothetical protein | - |
| I6I16_RS27010 () | 87433..88587 | - | 1155 | WP_001139957.1 | integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|