MGE detailed information
MGE type: Conjugative plasmid MGE length: 128137 bp
Accession: NZ_CP065971 Location: 1..128137 Organism: Escherichia coli strain FDAARGOS_1058 Replicon: plasmid unnamed3
Accession: NZ_CP065971 Location: 1..128137 Organism: Escherichia coli strain FDAARGOS_1058 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6I15_RS25305 () | 766..1272 | + | 507 | WP_001064278.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| I6I15_RS25310 () | 2014..3400 | + | 1387 | Protein_1 | group II intron reverse transcriptase/maturase | - |
| I6I15_RS25315 () | 3481..3942 | + | 462 | Protein_2 | IS3 family transposase | - |
| I6I15_RS25320 () | 4079..7123 | + | 3045 | WP_001102791.1 | Dermonecrotic toxin | VF |
| I6I15_RS25325 () | 8003..8443 | - | 441 | Protein_4 | (Fe-S)-binding protein | - |
| I6I15_RS25330 () | 9163..9898 | + | 736 | Protein_5 | helix-turn-helix domain-containing protein | - |
| I6I15_RS25335 () | 10840..11079 | + | 240 | Protein_6 | transposase | - |
| I6I15_RS25340 () | 11145..12307 | + | 1163 | WP_085947598.1 | IS3 family transposase ISEc17 | Transposase |
| I6I15_RS25345 () | 12335..12652 | + | 318 | Protein_8 | IS21 family transposase IS21 | Transposase |
| I6I15_RS25350 () | 13656..14432 | + | 777 | WP_000182209.1 | Cytolethal distending toxin subunit A | VF |
| I6I15_RS25355 () | 14429..15238 | + | 810 | WP_000759934.1 | Cytolethal distending toxin subunit B | VF |
| I6I15_RS25360 () | 15253..15798 | + | 546 | WP_000825549.1 | hypothetical protein | VF |
| I6I15_RS25365 () | 15908..16078 | + | 171 | Protein_12 | IS110 family transposase | - |
| I6I15_RS25370 () | 16097..16285 | + | 189 | Protein_13 | hypothetical protein | - |
| I6I15_RS25375 () | 16394..16819 | - | 426 | Protein_14 | IS66 family transposase ISEc8 | Transposase |
| I6I15_RS25380 () | 16807..17831 | + | 1025 | Protein_15 | IS3 family transposase IS2 | Transposase |
| I6I15_RS25385 () | 17980..18267 | - | 288 | WP_000865085.1 | helix-turn-helix transcriptional regulator | - |
| I6I15_RS25390 () | 18267..18578 | - | 312 | WP_000483535.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| I6I15_RS25395 () | 18684..18824 | - | 141 | WP_001315588.1 | hypothetical protein | - |
| I6I15_RS25400 () | 19523..20380 | - | 858 | WP_000130977.1 | incFII family plasmid replication initiator RepA | - |
| I6I15_RS25405 () | 20373..20447 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| I6I15_RS25410 () | 20689..20937 | - | 249 | WP_000083838.1 | replication regulatory protein RepA | - |
| I6I15_RS25415 () | 21221..21427 | - | 207 | WP_001362723.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 21414..21475 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 21414..21475 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 21414..21475 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 21414..21475 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| I6I15_RS25420 () | 21650..22033 | - | 384 | WP_001109067.1 | hypothetical protein | - |
| I6I15_RS25425 () | 22136..22597 | - | 462 | WP_000760085.1 | thermonuclease family protein | - |
| I6I15_RS25430 () | 23340..23543 | - | 204 | WP_001327131.1 | hypothetical protein | - |
| I6I15_RS25435 () | 23698..24255 | - | 558 | WP_000840474.1 | fertility inhibition protein FinO | - |
| I6I15_RS25440 () | 24358..25218 | - | 861 | WP_000704525.1 | putative protein YcjY | VF |
| I6I15_RS25445 () | 25277..26023 | - | 747 | WP_000205769.1 | conjugal transfer pilus acetylase TraX | - |
| I6I15_RS25450 () | 26043..31313 | - | 5271 | WP_000986998.1 | Multifunctional conjugation protein TraI | Relaxase |
| I6I15_RS25455 () | 31313..33520 | - | 2208 | WP_063121798.1 | type IV conjugative transfer system coupling protein TraD | - |
| I6I15_RS25460 () | 33773..34504 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| I6I15_RS25465 () | 34529..35050 | - | 522 | WP_000632670.1 | conjugal transfer entry exclusion protein TraS | - |
| I6I15_RS25470 () | 35083..37899 | - | 2817 | WP_001007053.1 | conjugal transfer mating pair stabilization protein TraG | - |
| I6I15_RS25475 () | 37896..39269 | - | 1374 | WP_000944319.1 | conjugal transfer protein TraH | - |
| I6I15_RS25480 () | 39256..39681 | - | 426 | WP_001109529.1 | F-type conjugal transfer protein TrbF | - |
| I6I15_RS25485 () | 39635..39976 | - | 342 | WP_001442101.1 | P-type conjugative transfer protein TrbJ | - |
| I6I15_RS25490 () | 39906..40451 | - | 546 | WP_000059849.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| I6I15_RS25495 () | 40438..40722 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| I6I15_RS25500 () | 40803..41117 | + | 315 | WP_000415568.1 | hypothetical protein | - |
| I6I15_RS25505 () | 41119..41466 | - | 348 | WP_001287914.1 | conjugal transfer protein TrbA | - |
| I6I15_RS25510 () | 41482..42225 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| I6I15_RS25515 () | 42218..42475 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| I6I15_RS25520 () | 42502..44310 | - | 1809 | WP_000821840.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| I6I15_RS25525 () | 44307..44945 | - | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| I6I15_RS25530 () | 44954..45946 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| I6I15_RS25535 () | 45943..46575 | - | 633 | WP_001203717.1 | type-F conjugative transfer system protein TraW | - |
| I6I15_RS25540 () | 46572..46958 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| I6I15_RS25545 () | 46955..49582 | - | 2628 | WP_001064243.1 | type IV secretion system protein TraC | - |
| I6I15_RS25550 () | 49742..49963 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| I6I15_RS25555 () | 50098..50613 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| I6I15_RS25560 () | 50610..50861 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| I6I15_RS25565 () | 50854..51207 | - | 354 | WP_071531500.1 | conjugal transfer protein TrbD | - |
| I6I15_RS25570 () | 51161..51751 | - | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| I6I15_RS25575 () | 51741..53168 | - | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| I6I15_RS25580 () | 53168..53872 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| I6I15_RS25585 () | 53883..54449 | - | 567 | WP_000399790.1 | type IV conjugative transfer system protein TraE | - |
| I6I15_RS25590 () | 54471..54782 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| I6I15_RS25595 () | 54797..55162 | - | 366 | WP_000340282.1 | type IV conjugative transfer system pilin TraA | - |
| I6I15_RS25600 () | 55205..55420 | - | 216 | WP_001352842.1 | conjugal transfer relaxosome protein TraY | - |
| I6I15_RS25605 () | 55556..56203 | - | 648 | WP_000332520.1 | conjugal transfer transcriptional regulator TraJ | - |
| I6I15_RS25610 () | 56394..56777 | - | 384 | WP_001063020.1 | relaxosome protein TraM | - |
| I6I15_RS25615 () | 57117..57719 | + | 603 | WP_000243707.1 | hypothetical protein | VF |
| I6I15_RS25620 () | 58015..58836 | - | 822 | Protein_63 | DUF945 domain-containing protein | - |
| I6I15_RS25625 () | 58956..59243 | - | 288 | WP_000107542.1 | hypothetical protein | - |
| I6I15_RS25630 () | 59268..59474 | - | 207 | WP_032192990.1 | hypothetical protein | - |
| I6I15_RS25635 () | 60151..60309 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 60353..60577 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 60353..60577 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 60353..60577 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 60353..60577 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| I6I15_RS25640 () | 60389..60577 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| I6I15_RS25645 () | 60589..61308 | - | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| I6I15_RS25650 () | 61305..61739 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| I6I15_RS25655 () | 61794..63752 | - | 1959 | WP_063121799.1 | ParB/RepB/Spo0J family partition protein | - |
| I6I15_RS25660 () | 63818..64051 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| I6I15_RS25665 () | 64114..64653 | - | 540 | WP_000290838.1 | single-stranded DNA-binding protein | - |
| I6I15_RS25670 () | 64679..64885 | - | 207 | WP_000275853.1 | hypothetical protein | - |
| I6I15_RS25675 () | 65296..65520 | - | 225 | WP_063123567.1 | hypothetical protein | - |
| I6I15_RS25680 () | 65520..66083 | - | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| I6I15_RS25685 () | 66131..67492 | - | 1362 | WP_000199439.1 | DUF3560 domain-containing protein | - |
| I6I15_RS25690 () | 67544..67774 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| I6I15_RS25695 () | 68695..69186 | - | 492 | WP_047090239.1 | DUF1380 family protein | - |
| I6I15_RS25700 () | 69186..69488 | - | 303 | WP_072130806.1 | antirestriction protein | - |
| I6I15_RS25705 () | 70025..70795 | - | 771 | WP_001044386.1 | hypothetical protein | - |
| I6I15_RS25710 () | 70840..71274 | - | 435 | WP_000274461.1 | DUF1380 family protein | - |
| I6I15_RS25715 () | 71288..71509 | - | 222 | WP_000558823.1 | hypothetical protein | - |
| I6I15_RS25720 () | 71510..72193 | - | 684 | WP_044867467.1 | DNA methylase | - |
| I6I15_RS25725 () | 72269..72580 | - | 312 | WP_032236158.1 | hypothetical protein | - |
| I6I15_RS25730 () | 72577..73479 | - | 903 | WP_000545762.1 | DUF1281 domain-containing protein | - |
| I6I15_RS25735 () | 73556..75280 | - | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| I6I15_RS25740 () | 76303..76551 | + | 249 | WP_000619113.1 | DinI-like family protein | - |
| I6I15_RS25745 () | 76548..76967 | + | 420 | WP_000109083.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| I6I15_RS25750 () | 76957..77924 | + | 968 | Protein_89 | translesion error-prone DNA polymerase V subunit UmuC | - |
| I6I15_RS25755 () | 77926..78342 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| I6I15_RS25760 () | 78335..79315 | - | 981 | WP_000688502.1 | plasmid segregation protein ParM | - |
| I6I15_RS25765 () | 79729..80037 | - | 309 | WP_000030206.1 | molecular chaperone GroEL | - |
| I6I15_RS25770 () | 80124..80768 | - | 645 | WP_001144036.1 | ParA family protein | - |
| I6I15_RS25775 () | 80950..81471 | - | 522 | Protein_94 | Tyrosine recombinase XerD | VF |
| I6I15_RS25780 () | 81714..82298 | - | 585 | WP_000517560.1 | hypothetical protein | - |
| I6I15_RS25785 () | 82487..83700 | + | 1214 | WP_167774810.1 | IS3 family transposase IS629 | Transposase |
| I6I15_RS25790 () | 83872..86067 | - | 2196 | WP_073972931.1 | Ferric aerobactin receptor | VF |
| I6I15_RS25795 () | 86073..87410 | - | 1338 | WP_000750141.1 | L-lysine N6-monooxygenase | VF |
| I6I15_RS25800 () | 87407..89149 | - | 1743 | WP_001015709.1 | Aerobactin synthase | VF |
| I6I15_RS25805 () | 89149..90096 | - | 948 | WP_001287497.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| I6I15_RS25810 () | 90097..91821 | - | 1725 | WP_001299620.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| I6I15_RS25815 () | 91957..93150 | + | 1194 | WP_000074481.1 | MFS transporter | - |
| I6I15_RS25820 () | 93536..94533 | + | 998 | Protein_103 | IS3 family transposase IS629 | Transposase |
| I6I15_RS25825 () | 95895..96872 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| I6I15_RS25830 () | 97157..97897 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| I6I15_RS25835 () | 98018..98152 | - | 135 | Protein_106 | serine/threonine protein kinase | - |
| I6I15_RS25840 () | 98654..100153 | - | 1500 | WP_181875487.1 | alpha/beta hydrolase | - |
| I6I15_RS25845 () | 100246..101193 | - | 948 | WP_134881399.1 | Outer membrane protease OmpP | VF |
| I6I15_RS25850 () | 102215..102595 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| I6I15_RS25855 () | 102592..102939 | + | 348 | WP_000612607.1 | IS66 family transposase ISEc8 | Transposase |
| I6I15_RS25860 () | 102989..104526 | + | 1538 | Protein_111 | IS66 family transposase ISEc8 | Transposase |
| I6I15_RS25865 () | 105044..106264 | + | 1221 | WP_000040077.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| I6I15_RS25870 () | 106257..111230 | + | 4974 | WP_115200395.1 | putative autotransporter | VF |
| I6I15_RS25875 () | 112665..113501 | - | 837 | WP_000149836.1 | Right origin-binding protein | VF |
| I6I15_RS25880 () | 113816..114847 | - | 1032 | Protein_115 | IS3 family transposase | - |
| I6I15_RS25890 () | 117052..117999 | + | 948 | WP_001253824.1 | DMT family transporter | - |
| I6I15_RS25895 () | 118489..118887 | - | 399 | WP_001258285.1 | IS3 family transposase ISAs9 | Transposase |
| I6I15_RS25900 () | 118991..119316 | + | 326 | Protein_118 | IS3 family transposase ISAs9 | Transposase |
| I6I15_RS25905 () | 119712..119963 | - | 252 | WP_001315600.1 | MarR family transcriptional regulator | - |
| I6I15_RS25910 () | 120512..120729 | - | 218 | Protein_120 | DDE-type integrase/transposase/recombinase | - |
| I6I15_RS25915 () | 120746..121822 | - | 1077 | Protein_121 | IS110 family transposase ISEc21 | Transposase |
| I6I15_RS25920 () | 122104..122695 | - | 592 | Protein_122 | IS3 family transposase | - |
| I6I15_RS25925 () | 122705..123187 | - | 483 | Protein_123 | IS30 family transposase IS30D | Transposase |
| I6I15_RS25930 () | 123273..124295 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| I6I15_RS25935 () | 124295..125074 | + | 780 | WP_001323403.1 | IS21 family transposase IS100kyp | Transposase |
| I6I15_RS25940 () | 125141..125815 | - | 675 | Protein_126 | IS30 family transposase IS30D | Transposase |
| I6I15_RS25945 () | 125883..126140 | - | 258 | Protein_127 | IS3 family transposase IS911 | Transposase |
| I6I15_RS25950 () | 126213..126788 | + | 576 | Protein_128 | ISL3 family transposase ISEc38 | Transposase |
| I6I15_RS25955 () | 126921..127336 | - | 416 | Protein_129 | IS3 family transposase ISKpn37 | Transposase |
| I6I15_RS25960 () | 127395..127637 | + | 243 | Protein_130 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|