MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93933 bp
Accession: NZ_CP065638 Location: 1..93933 Organism: Salmonella enterica strain FDAARGOS_928 Replicon: plasmid unnamed
Accession: NZ_CP065638 Location: 1..93933 Organism: Salmonella enterica strain FDAARGOS_928 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6G85_RS00010 () | 413..1153 | - | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| I6G85_RS00015 () | 1140..1706 | - | 567 | WP_000399769.1 | type IV conjugative transfer system protein TraE | - |
| I6G85_RS00020 () | 1728..2039 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| I6G85_RS00025 () | 2054..2416 | - | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| I6G85_RS00030 () | 2458..2685 | - | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| I6G85_RS00035 () | 2779..3465 | - | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| I6G85_RS00040 () | 3658..4038 | - | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| I6G85_RS00045 () | 4453..4923 | + | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| I6G85_RS00050 () | 5234..6052 | - | 819 | Protein_9 | DUF945 domain-containing protein | - |
| I6G85_RS00055 () | 6155..6313 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| I6G85_RS00060 () | 6562..7299 | - | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| I6G85_RS00065 () | 7296..7730 | - | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| I6G85_RS00070 () | 7770..9767 | - | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| I6G85_RS00075 () | 9836..10078 | - | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| I6G85_RS00080 () | 10133..10651 | - | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| I6G85_RS00085 () | 11245..11406 | - | 162 | WP_153810625.1 | hypothetical protein | - |
| I6G85_RS00090 () | 11370..11693 | - | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| I6G85_RS00095 () | 11929..12363 | - | 435 | WP_000274533.1 | DUF1380 family protein | - |
| I6G85_RS00100 () | 12430..12864 | - | 435 | WP_001200150.1 | antirestriction protein | - |
| I6G85_RS00105 () | 13360..14124 | - | 765 | WP_001246548.1 | membrane protein | - |
| I6G85_RS00110 () | 14196..14609 | - | 414 | WP_000990114.1 | DUF1380 family protein | - |
| I6G85_RS00115 () | 14665..14886 | - | 222 | WP_001109588.1 | hypothetical protein | - |
| I6G85_RS00120 () | 14886..15566 | - | 681 | WP_000088645.1 | DNA methylase | - |
| I6G85_RS00125 () | 15948..16304 | - | 357 | WP_000369839.1 | hypothetical protein | - |
| I6G85_RS00130 () | 16297..16767 | - | 471 | WP_000490265.1 | hypothetical protein | - |
| I6G85_RS00135 () | 17278..17700 | + | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| I6G85_RS00140 () | 17700..18974 | + | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| I6G85_RS00145 () | 19056..20030 | - | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| I6G85_RS00150 () | 20030..21235 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| I6G85_RS00155 () | 21650..22591 | + | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| I6G85_RS00160 () | 22623..23189 | - | 567 | WP_001541562.1 | DUF2913 family protein | - |
| I6G85_RS00165 () | 23246..23581 | - | 336 | WP_001527010.1 | hypothetical protein | - |
| I6G85_RS00170 () | 23765..24181 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| I6G85_RS00175 () | 24267..25382 | - | 1116 | WP_001247118.1 | DNA-binding protein | - |
| I6G85_RS00180 () | 25641..26129 | + | 489 | WP_001135407.1 | hypothetical protein | - |
| I6G85_RS00185 () | 26784..27524 | + | 741 | WP_001541566.1 | carbonic anhydrase | - |
| I6G85_RS00190 () | 27731..28291 | + | 561 | WP_001240331.1 | recombinase family protein | - |
| I6G85_RS00195 () | 28275..29939 | + | 1665 | WP_000098783.1 | IS481 family transposase | - |
| I6G85_RS00200 () | 29872..30897 | + | 1026 | WP_001576625.1 | ExeA family protein | - |
| I6G85_RS00205 () | 31086..32123 | - | 1038 | WP_001121399.1 | IS630 family transposase | - |
| I6G85_RS00210 () | 32732..33625 | + | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| I6G85_RS00215 () | 33799..33963 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| I6G85_RS00220 () | 34137..34904 | + | 768 | WP_001526990.1 | virulence protein SpvA | - |
| I6G85_RS00225 () | 34867..35034 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| I6G85_RS00230 () | 35086..36861 | + | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| I6G85_RS00235 () | 37143..37868 | + | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| I6G85_RS00240 () | 38129..38779 | + | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| I6G85_RS00245 () | 38906..39330 | - | 425 | Protein_48 | IS200/IS605 family transposase | - |
| I6G85_RS00250 () | 39387..39737 | + | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| I6G85_RS00255 () | 39804..40364 | - | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| I6G85_RS00260 () | 40520..40807 | + | 288 | WP_071530243.1 | hypothetical protein | - |
| I6G85_RS00265 () | 41084..41569 | - | 486 | WP_000905606.1 | membrane protein | - |
| I6G85_RS00270 () | 41563..42072 | - | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| I6G85_RS00275 () | 42076..42789 | - | 714 | Protein_54 | EAL domain-containing protein | - |
| I6G85_RS00280 () | 42798..43580 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| I6G85_RS00285 () | 43615..44136 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| I6G85_RS00290 () | 44133..44423 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| I6G85_RS00295 () | 44425..44730 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| I6G85_RS00300 () | 44732..44950 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| I6G85_RS00305 () | 45626..46147 | + | 522 | WP_010999942.1 | hypothetical protein | - |
| I6G85_RS00310 () | 46631..46927 | + | 297 | WP_001687482.1 | hypothetical protein | - |
| I6G85_RS00315 () | 47421..48410 | + | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| I6G85_RS00320 () | 48669..49113 | - | 445 | Protein_63 | site-specific integrase | - |
| I6G85_RS00325 () | 49282..49663 | - | 382 | Protein_64 | YgiW/YdeI family stress tolerance OB fold protein | - |
| I6G85_RS00330 () | 50382..50684 | + | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| I6G85_RS00335 () | 50959..51477 | + | 519 | WP_000748205.1 | major pilin PefA | - |
| I6G85_RS00340 () | 51705..54113 | + | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| I6G85_RS00345 () | 54106..54798 | + | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| I6G85_RS00350 () | 54813..55370 | + | 558 | WP_010999940.1 | membrane protein | - |
| I6G85_RS00355 () | 55623..56498 | + | 876 | WP_010999939.1 | membrane protein | - |
| I6G85_RS00360 () | 56930..57142 | + | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| I6G85_RS00365 () | 57127..57477 | + | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| I6G85_RS00370 () | 57722..58375 | + | 654 | WP_000178592.1 | DsbA family protein | - |
| I6G85_RS00375 () | 58365..58511 | + | 147 | WP_001192557.1 | hypothetical protein | - |
| I6G85_RS00380 () | 58508..59407 | + | 900 | WP_010999938.1 | YjiK family protein | - |
| I6G85_RS00385 () | 59497..60054 | + | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| I6G85_RS00390 () | 60321..61079 | + | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| I6G85_RS00395 () | 61176..61397 | - | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| I6G85_RS00400 () | 62257..63138 | - | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| I6G85_RS00405 () | 63119..63196 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| I6G85_RS00410 () | 63446..63712 | - | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| I6G85_RS00415 () | 63891..64334 | - | 444 | WP_010999935.1 | phospholipase | - |
| I6G85_RS00420 () | 64500..64655 | - | 156 | WP_000983042.1 | hypothetical protein | - |
| I6G85_RS00425 () | 64668..64952 | - | 285 | WP_000477658.1 | hypothetical protein | - |
| I6G85_RS00430 () | 65067..65630 | - | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| I6G85_RS00435 () | 65685..66425 | - | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| I6G85_RS00440 () | 66445..71703 | - | 5259 | WP_000986921.1 | conjugative transfer relaxase/helicase TraI | - |
| I6G85_RS00445 () | 71785..72012 | + | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| I6G85_RS00450 () | 72012..72410 | + | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| I6G85_RS00455 () | 72419..74662 | - | 2244 | WP_000009320.1 | type IV conjugative transfer system coupling protein TraD | - |
| I6G85_RS00460 () | 75039..75770 | - | 732 | WP_000782438.1 | complement resistance protein TraT | - |
| I6G85_RS00465 () | 75806..76300 | - | 495 | WP_010999946.1 | entry exclusion protein | - |
| I6G85_RS00470 () | 76316..79138 | - | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| I6G85_RS00475 () | 79135..80517 | - | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| I6G85_RS00480 () | 80507..81055 | - | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| I6G85_RS00485 () | 81042..81335 | - | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| I6G85_RS00490 () | 81549..82298 | - | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| I6G85_RS00495 () | 82310..82525 | - | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| I6G85_RS00500 () | 82536..84362 | - | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| I6G85_RS00505 () | 84359..84778 | - | 420 | WP_001229397.1 | HNH endonuclease | - |
| I6G85_RS00510 () | 84815..85453 | - | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| I6G85_RS00515 () | 85438..85746 | - | 309 | WP_010999945.1 | hypothetical protein | - |
| I6G85_RS00520 () | 85765..86757 | - | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| I6G85_RS00525 () | 86754..87386 | - | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| I6G85_RS00530 () | 87383..87769 | - | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| I6G85_RS00535 () | 87744..90392 | - | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| I6G85_RS00540 () | 90408..90671 | - | 264 | WP_001239256.1 | hypothetical protein | - |
| I6G85_RS00545 () | 90788..91255 | - | 468 | WP_000549562.1 | hypothetical protein | - |
| I6G85_RS00550 () | 91248..91469 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| I6G85_RS00555 () | 91604..92119 | - | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| I6G85_RS00560 () | 92116..92361 | - | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| I6G85_RS00565 () | 92339..92935 | - | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|