MGE detailed information
MGE type: Genomic_island MGE length: 9442 bp
Accession: NZ_CP065607 Location: 1579458..1588899 Organism: Escherichia coli strain FDAARGOS_946 Replicon: chromosome
Accession: NZ_CP065607 Location: 1579458..1588899 Organism: Escherichia coli strain FDAARGOS_946 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6H03_RS08170 () | 1575290..1576621 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| I6H03_RS08175 () | 1576643..1577632 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| I6H03_RS08180 () | 1577731..1578669 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| I6H03_RS08185 () | 1578858..1579202 | + | 345 | WP_000145832.1 | transcriptional activator TdcR | - |
| I6H03_RS08190 () | 1579458..1579997 | + | 540 | WP_000675739.1 | hypothetical protein | - |
| I6H03_RS08195 () | 1580019..1581207 | + | 1189 | Protein_1515 | YhaC family protein | - |
| I6H03_RS08205 () | 1581723..1582868 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| I6H03_RS08210 () | 1582965..1583855 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| I6H03_RS08215 () | 1583885..1584655 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| I6H03_RS08220 () | 1584671..1586005 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| I6H03_RS08225 () | 1586380..1587951 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| I6H03_RS08230 () | 1588100..1588435 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| I6H03_RS08235 () | 1588435..1588899 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| I6H03_RS08240 () | 1588954..1589763 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| I6H03_RS08245 () | 1590012..1591292 | + | 1281 | WP_000681946.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| I6H03_RS08250 () | 1591315..1591788 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| I6H03_RS08255 () | 1591799..1592578 | + | 780 | WP_000406210.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| I6H03_RS08260 () | 1592568..1593446 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| I6H03_RS08265 () | 1593464..1593898 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0.002 |