MGE detailed information
MGE type: Genomic_island MGE length: 48822 bp
Accession: NZ_CP065178 Location: 1529760..1578581 Organism: Pectobacterium quasiaquaticum strain A398-S21-F17 Replicon: chromosome
Accession: NZ_CP065178 Location: 1529760..1578581 Organism: Pectobacterium quasiaquaticum strain A398-S21-F17 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IG605_RS07130 (IG605_007125) | 1525776..1526888 | + | 1113 | WP_250116862.1 | MFS transporter | - |
| IG605_RS07135 (IG605_007130) | 1527207..1528481 | - | 1275 | WP_193408053.1 | tyrosine-type recombinase/integrase | - |
| IG605_RS07145 (IG605_007140) | 1529098..1529367 | + | 270 | Protein_1372 | LysR family transcriptional regulator | - |
| IG605_RS07150 (IG605_007145) | 1529760..1530026 | + | 267 | WP_102119242.1 | anti-adapter protein IraP | - |
| IG605_RS07155 (IG605_007150) | 1530197..1531609 | - | 1413 | WP_193399466.1 | D-serine/D-alanine/glycine transporter | - |
| IG605_RS07165 (IG605_007160) | 1532489..1532776 | + | 288 | WP_102119244.1 | hypothetical protein | - |
| IG605_RS07170 (IG605_007165) | 1532868..1533092 | - | 225 | WP_102119245.1 | DUF2594 family protein | - |
| IG605_RS07175 (IG605_007170) | 1533736..1534392 | + | 657 | WP_010279369.1 | Response regulator UvrY | VF |
| IG605_RS07180 (IG605_007175) | 1534385..1536217 | + | 1833 | WP_193399467.1 | excinuclease ABC subunit UvrC | - |
| IG605_RS07185 (IG605_007180) | 1536276..1536824 | + | 549 | WP_193399468.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| IG605_RS07205 (IG605_007200) | 1537462..1538712 | + | 1251 | WP_193408054.1 | Prophage integrase IntA ; Integrase | Integrase |
| IG605_RS07210 (IG605_007205) | 1538896..1540587 | + | 1692 | WP_193399470.1 | ATP-binding protein | - |
| IG605_RS07215 (IG605_007210) | 1540587..1541060 | + | 474 | WP_193399471.1 | hypothetical protein | - |
| IG605_RS07220 (IG605_007215) | 1541040..1541375 | - | 336 | WP_193399472.1 | DNA sulfur modification protein DndE | - |
| IG605_RS07225 (IG605_007220) | 1541378..1543336 | - | 1959 | WP_193399473.1 | DNA sulfur modification protein DndD | - |
| IG605_RS07230 (IG605_007225) | 1543326..1544993 | - | 1668 | WP_193399474.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| IG605_RS07235 (IG605_007230) | 1544990..1546069 | - | 1080 | WP_193399475.1 | DNA sulfur modification protein DndB | - |
| IG605_RS07240 (IG605_007235) | 1546199..1547323 | + | 1125 | WP_193399476.1 | cysteine desulfurase DndA | - |
| IG605_RS07245 | 1547438..1547527 | - | 90 | Protein_1388 | restriction endonuclease | - |
| IG605_RS07250 (IG605_007240) | 1547616..1548161 | - | 546 | WP_193399477.1 | LuxR C-terminal-related transcriptional regulator | - |
| IG605_RS19905 (IG605_007245) | 1548211..1549665 | - | 1455 | WP_193399478.1 | Flagellin | VF |
| IG605_RS07265 (IG605_007250) | 1549927..1550265 | - | 339 | WP_193399479.1 | hypothetical protein | - |
| IG605_RS07270 (IG605_007255) | 1550631..1551236 | - | 606 | WP_193399480.1 | hypothetical protein | - |
| IG605_RS07275 (IG605_007260) | 1551246..1555511 | - | 4266 | WP_193399481.1 | RHS repeat-associated core domain-containing protein | - |
| IG605_RS07280 (IG605_007265) | 1555504..1555947 | - | 444 | WP_193399482.1 | DUF1795 domain-containing protein | - |
| IG605_RS07285 (IG605_007270) | 1555976..1557805 | - | 1830 | WP_193408055.1 | Actin cross-linking toxin VgrG1 | VF |
| IG605_RS07290 (IG605_007275) | 1557927..1558445 | - | 519 | WP_039503428.1 | Major exported protein | VF |
| IG605_RS07295 (IG605_007280) | 1558777..1559364 | - | 588 | WP_193399484.1 | hypothetical protein | - |
| IG605_RS07300 (IG605_007285) | 1559518..1559943 | - | 426 | WP_129705764.1 | putative zinc ribbon protein | - |
| IG605_RS07305 (IG605_007290) | 1560036..1560248 | - | 213 | WP_193399485.1 | AlpA family transcriptional regulator | - |
| IG605_RS07310 (IG605_007295) | 1560353..1560943 | - | 591 | WP_193399486.1 | inovirus-type Gp2 protein | - |
| IG605_RS07315 (IG605_007300) | 1561714..1562769 | + | 1056 | WP_193399487.1 | hypothetical protein | - |
| IG605_RS07320 (IG605_007305) | 1562865..1563752 | + | 888 | WP_193399488.1 | 50S ribosome-binding GTPase | - |
| IG605_RS07325 (IG605_007310) | 1563936..1564094 | + | 159 | WP_189654467.1 | hypothetical protein | - |
| IG605_RS07330 (IG605_007315) | 1564241..1565074 | + | 834 | WP_193399489.1 | hypothetical protein | - |
| IG605_RS07335 (IG605_007320) | 1565132..1565482 | + | 351 | WP_193399490.1 | hypothetical protein | - |
| IG605_RS07340 (IG605_007325) | 1565605..1566078 | + | 474 | WP_193399491.1 | DNA repair protein RadC | - |
| IG605_RS07345 (IG605_007330) | 1566118..1566453 | + | 336 | WP_193399492.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| IG605_RS07350 (IG605_007335) | 1566523..1566843 | + | 321 | WP_193408056.1 | TA system toxin CbtA family protein | Toxin Detail |
| IG605_RS07355 (IG605_007340) | 1566961..1567794 | + | 834 | WP_193408057.1 | DUF4942 domain-containing protein | - |
| IG605_RS07360 (IG605_007345) | 1567888..1568118 | + | 231 | WP_012765080.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| IG605_RS07365 (IG605_007350) | 1568118..1568546 | + | 429 | WP_193408058.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| IG605_RS07370 (IG605_007355) | 1568839..1570275 | - | 1437 | WP_226373479.1 | IS1182 family transposase ISYen4 | Transposase |
| IG605_RS07375 (IG605_007360) | 1570541..1570753 | - | 213 | Protein_1413 | IS110 family transposase ISYps2 | Transposase |
| IG605_RS07380 (IG605_007365) | 1570842..1571105 | + | 264 | Protein_1414 | integrase core domain-containing protein | - |
| IG605_RS07385 (IG605_007370) | 1571135..1571353 | + | 219 | Protein_1415 | IS3 family transposase | - |
| IG605_RS07390 (IG605_007375) | 1571636..1575235 | + | 3600 | WP_193407934.1 | AAA domain-containing protein | - |
| IG605_RS07395 | 1575602..1575946 | - | 345 | WP_226373434.1 | hypothetical protein | - |
| IG605_RS07400 | 1575996..1576412 | - | 417 | WP_250116863.1 | Flagellin | VF |
| IG605_RS07405 | 1576363..1576677 | - | 315 | WP_226373433.1 | hypothetical protein | - |
| IG605_RS07410 | 1577204..1577341 | + | 138 | WP_240348903.1 | YnfU family zinc-binding protein | - |
| IG605_RS07415 (IG605_007390) | 1577308..1577571 | + | 264 | WP_193402090.1 | hypothetical protein | - |
| IG605_RS07420 (IG605_007395) | 1577658..1578581 | + | 924 | WP_193407933.1 | Lipid A biosynthesis palmitoleoyltransferase | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|