MGE detailed information
MGE type: Prophage MGE length: 32830 bp
Accession: NZ_CP065178 Location: 1032009..1064838 Organism: Pectobacterium quasiaquaticum strain A398-S21-F17 Replicon: chromosome
Accession: NZ_CP065178 Location: 1032009..1064838 Organism: Pectobacterium quasiaquaticum strain A398-S21-F17 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IG605_RS04765 (IG605_004755) | 1027033..1027827 | - | 795 | WP_193399563.1 | inner membrane protein YpjD | - |
| IG605_RS04770 (IG605_004760) | 1027997..1029358 | + | 1362 | WP_102119001.1 | signal recognition particle protein | - |
| IG605_RS04775 (IG605_004765) | 1029516..1029764 | + | 249 | WP_010285998.1 | 30S ribosomal protein S16 | - |
| IG605_RS04780 (IG605_004770) | 1029783..1030331 | + | 549 | WP_193399564.1 | ribosome maturation factor RimM | - |
| IG605_RS04785 (IG605_004775) | 1030370..1031125 | + | 756 | WP_193399565.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| IG605_RS04790 (IG605_004780) | 1031188..1031535 | + | 348 | WP_039483928.1 | 50S ribosomal protein L19 | - |
| IG605_RS04795 (IG605_004785) | 1031708..1031926 | - | 219 | WP_116156396.1 | DNA-binding transcriptional regulator | - |
| IG605_RS04800 (IG605_004790) | 1032009..1033172 | - | 1164 | WP_193407847.1 | phage late control D family protein | - |
| IG605_RS04805 (IG605_004795) | 1033169..1033654 | - | 486 | WP_116186456.1 | phage tail protein | - |
| IG605_RS04810 (IG605_004800) | 1033659..1036535 | - | 2877 | WP_193407846.1 | phage tail tape measure protein | - |
| IG605_RS04815 (IG605_004805) | 1036528..1036650 | - | 123 | WP_039512472.1 | GpE family phage tail protein | - |
| IG605_RS04820 (IG605_004810) | 1036665..1036961 | - | 297 | WP_116156392.1 | phage tail assembly protein | - |
| IG605_RS04825 (IG605_004815) | 1037029..1037550 | - | 522 | WP_039512476.1 | phage major tail tube protein | - |
| IG605_RS04830 (IG605_004820) | 1037563..1038732 | - | 1170 | WP_193407845.1 | phage tail sheath protein | - |
| IG605_RS04835 | 1039110..1041122 | - | 2013 | WP_250116857.1 | phage tail protein | - |
| IG605_RS04840 (IG605_004830) | 1041119..1041730 | - | 612 | WP_193407843.1 | phage tail protein I | - |
| IG605_RS04845 (IG605_004835) | 1041723..1042631 | - | 909 | WP_193407842.1 | baseplate assembly protein | - |
| IG605_RS04850 (IG605_004840) | 1042635..1042979 | - | 345 | WP_103184661.1 | GPW/gp25 family protein | - |
| IG605_RS04855 (IG605_004845) | 1042976..1043611 | - | 636 | WP_193407851.1 | phage baseplate assembly protein V | - |
| IG605_RS04860 (IG605_004850) | 1043752..1044096 | + | 345 | WP_116167083.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IG605_RS04865 (IG605_004855) | 1044096..1044395 | + | 300 | WP_116167084.1 | XRE family transcriptional regulator | Antitoxin Detail |
| IG605_RS04870 (IG605_004860) | 1044431..1044880 | - | 450 | WP_116167085.1 | phage virion morphogenesis protein | - |
| IG605_RS04875 (IG605_004865) | 1044873..1045331 | - | 459 | WP_193407841.1 | phage tail protein | - |
| IG605_RS04880 (IG605_004870) | 1045325..1045537 | - | 213 | WP_116167087.1 | hypothetical protein | - |
| IG605_RS04885 | 1045572..1045841 | - | 270 | WP_226373406.1 | Rz1-like lysis system protein LysC | - |
| IG605_RS04890 (IG605_004875) | 1045762..1046124 | - | 363 | Protein_935 | Rz-like lysis system protein LysB | - |
| IG605_RS04895 (IG605_004880) | 1046124..1046612 | - | 489 | WP_039491306.1 | glycoside hydrolase family 104 protein | - |
| IG605_RS04900 (IG605_004885) | 1046599..1046892 | - | 294 | WP_039350700.1 | phage holin family protein | - |
| IG605_RS04905 (IG605_004890) | 1046896..1047099 | - | 204 | WP_193407840.1 | tail protein X | - |
| IG605_RS04910 (IG605_004895) | 1047099..1047602 | - | 504 | WP_193407839.1 | head completion/stabilization protein | - |
| IG605_RS04915 (IG605_004900) | 1047694..1048353 | - | 660 | WP_161529625.1 | terminase endonuclease subunit | - |
| IG605_RS04920 (IG605_004905) | 1048357..1049484 | - | 1128 | WP_130622824.1 | phage major capsid protein, P2 family | - |
| IG605_RS04925 (IG605_004910) | 1049534..1050388 | - | 855 | WP_193407850.1 | GPO family capsid scaffolding protein | - |
| IG605_RS04930 (IG605_004915) | 1050528..1052297 | + | 1770 | WP_193407838.1 | terminase ATPase subunit family protein | - |
| IG605_RS04935 (IG605_004920) | 1052294..1053313 | + | 1020 | WP_165708436.1 | phage portal protein | - |
| IG605_RS04940 (IG605_004925) | 1053346..1053687 | - | 342 | WP_039276161.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| IG605_RS04945 (IG605_004930) | 1053684..1053938 | - | 255 | WP_116167000.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| IG605_RS04950 (IG605_004935) | 1054031..1054693 | - | 663 | WP_226373405.1 | ORF6N domain-containing protein | - |
| IG605_RS04955 (IG605_004940) | 1054817..1055158 | + | 342 | WP_226373404.1 | Arc family DNA-binding protein | - |
| IG605_RS04960 (IG605_004950) | 1055872..1056210 | - | 339 | WP_193407836.1 | hypothetical protein | - |
| IG605_RS04965 (IG605_004955) | 1056210..1056611 | - | 402 | WP_116226549.1 | hypothetical protein | - |
| IG605_RS04970 (IG605_004960) | 1056614..1058863 | - | 2250 | WP_193407835.1 | replication endonuclease | - |
| IG605_RS04975 (IG605_004965) | 1058860..1059609 | - | 750 | WP_039491325.1 | hypothetical protein | - |
| IG605_RS04980 (IG605_004970) | 1059606..1059818 | - | 213 | WP_226373403.1 | hypothetical protein | - |
| IG605_RS04985 (IG605_004975) | 1059815..1060126 | - | 312 | WP_193407834.1 | DUF5405 family protein | - |
| IG605_RS04990 (IG605_004980) | 1060126..1060368 | - | 243 | WP_226373402.1 | DUF2732 family protein | - |
| IG605_RS04995 (IG605_004985) | 1060437..1060937 | - | 501 | WP_193407832.1 | replication protein B | - |
| IG605_RS05000 (IG605_004990) | 1060934..1061110 | - | 177 | WP_189338687.1 | hypothetical protein | - |
| IG605_RS05005 (IG605_004995) | 1061243..1061494 | + | 252 | WP_039491335.1 | hypothetical protein | - |
| IG605_RS05010 (IG605_005000) | 1061719..1062015 | - | 297 | WP_116156574.1 | hypothetical protein | - |
| IG605_RS05015 (IG605_005005) | 1062023..1062532 | - | 510 | WP_193407831.1 | phage regulatory CII family protein | - |
| IG605_RS05020 (IG605_005010) | 1062571..1062795 | - | 225 | WP_029368829.1 | hypothetical protein | - |
| IG605_RS05025 (IG605_005015) | 1062925..1063788 | + | 864 | WP_193407830.1 | helix-turn-helix domain-containing protein | - |
| IG605_RS05030 (IG605_005020) | 1063807..1064838 | + | 1032 | WP_116238125.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| IG605_RS05035 (IG605_005025) | 1065213..1066151 | - | 939 | WP_193407829.1 | class I SAM-dependent methyltransferase | - |
| IG605_RS05040 (IG605_005030) | 1066414..1066761 | - | 348 | WP_193399567.1 | DUF2799 domain-containing protein | - |
| IG605_RS05045 (IG605_005035) | 1066808..1067524 | - | 717 | WP_193399568.1 | two-component system response regulator BtsR | - |
| IG605_RS05050 (IG605_005040) | 1067774..1068847 | + | 1074 | WP_193399569.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|