MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 43518 bp
Accession: NZ_CP064428 Location: 1..43518 Organism: Enterococcus faecium strain PR01996-12 Replicon: plasmid unnamed_4
Accession: NZ_CP064428 Location: 1..43518 Organism: Enterococcus faecium strain PR01996-12 Replicon: plasmid unnamed_4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUH71_RS15225 (IUH71_15225) | 1..1041 | + | 1041 | WP_000997689.1 | replication initiator protein A | - |
| IUH71_RS15230 (IUH71_15230) | 1657..2337 | - | 681 | WP_002287920.1 | IS6 family transposase IS1216E | Transposase |
| IUH71_RS15235 (IUH71_15235) | 2483..2566 | + | 84 | WP_001814874.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| IUH71_RS15240 (IUH71_15240) | 2691..3428 | + | 738 | WP_001038792.1 | rRNA adenine N-6-methyltransferase | ARG |
| IUH71_RS15245 (IUH71_15245) | 3598..3858 | + | 261 | Protein_4 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| IUH71_RS15250 (IUH71_15250) | 4021..4686 | + | 666 | Protein_5 | IS1182 family transposase IS1182 | Transposase |
| IUH71_RS15255 (IUH71_15255) | 4722..4967 | + | 246 | WP_000567888.1 | single-stranded DNA-binding protein | - |
| IUH71_RS15260 (IUH71_15260) | 5070..5939 | + | 870 | WP_000228166.1 | nucleotidyltransferase domain-containing protein | - |
| IUH71_RS15265 (IUH71_15265) | 5920..6654 | + | 735 | WP_000662263.1 | class I SAM-dependent methyltransferase | - |
| IUH71_RS15270 (IUH71_15270) | 6687..7595 | + | 909 | WP_048718102.1 | Aminoglycoside 6-adenylyltransferase | ARG |
| IUH71_RS15275 (IUH71_15275) | 7704..8891 | - | 1188 | WP_002297293.1 | IS110 family transposase ISBth13 | Transposase |
| IUH71_RS15280 (IUH71_15280) | 9212..9754 | + | 543 | WP_000627290.1 | streptothricin N-acetyltransferase Sat4 | - |
| IUH71_RS15285 (IUH71_15285) | 9847..10641 | + | 795 | WP_001096887.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| IUH71_RS15290 (IUH71_15290) | 10784..12071 | - | 1288 | Protein_13 | ISL3 family transposase | - |
| IUH71_RS15295 (IUH71_15295) | 12419..12961 | + | 543 | WP_002321977.1 | HTH domain-containing protein | - |
| IUH71_RS15300 (IUH71_15300) | 12991..13671 | - | 681 | WP_001015311.1 | IS6 family transposase IS1216E | Transposase |
| IUH71_RS15305 (IUH71_15305) | 14988..16007 | + | 1020 | WP_010729551.1 | Abi family protein | - |
| IUH71_RS15310 (IUH71_15310) | 16509..16925 | - | 417 | WP_002305824.1 | hypothetical protein | - |
| IUH71_RS15315 (IUH71_15315) | 16927..17208 | - | 282 | WP_000353845.1 | hypothetical protein | - |
| IUH71_RS15320 (IUH71_15320) | 17584..18108 | - | 525 | WP_002305828.1 | DUF536 domain-containing protein | - |
| IUH71_RS15325 (IUH71_15325) | 18125..19006 | - | 882 | Protein_20 | replication initiation protein | - |
| IUH71_RS15330 (IUH71_15330) | 19062..19742 | - | 681 | WP_001015311.1 | IS6 family transposase IS1216E | Transposase |
| IUH71_RS15335 (IUH71_15335) | 19817..19930 | + | 114 | Protein_22 | helix-turn-helix domain-containing protein | - |
| IUH71_RS15340 (IUH71_15340) | 20144..20839 | + | 696 | WP_001280781.1 | Transcriptional regulatory protein WalR | VF |
| IUH71_RS15345 (IUH71_15345) | 20817..21971 | + | 1155 | WP_002305818.1 | VanA-type vancomycin resistance histidine kinase VanS | - |
| IUH71_RS15350 (IUH71_15350) | 22069..23361 | - | 1293 | WP_000122610.1 | ISL3 family transposase IS1251 | Transposase |
| IUH71_RS15355 (IUH71_15355) | 23693..24661 | + | 969 | WP_001059542.1 | D-specific alpha-keto acid dehydrogenase | ARG |
| IUH71_RS15360 (IUH71_15360) | 24654..25685 | + | 1032 | WP_001079843.1 | Vancomycin/teicoplanin A-type resistance protein VanA | ARG |
| IUH71_RS15365 (IUH71_15365) | 25691..26299 | + | 609 | WP_000402348.1 | D-alanyl-D-alanine dipeptidase | ARG |
| IUH71_RS15370 (IUH71_15370) | 26727..27638 | + | 912 | WP_000732308.1 | VanY-A/VanY-F/VanY-M family D-Ala-D-Ala carboxypeptidase | - |
| IUH71_RS15375 (IUH71_15375) | 27791..28276 | + | 486 | WP_000516404.1 | glycopeptide resistance protein VanZ-A | - |
| IUH71_RS15380 (IUH71_15380) | 28563..28892 | - | 330 | WP_000754864.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| IUH71_RS15385 (IUH71_15385) | 29197..29526 | + | 330 | WP_000629052.1 | hypothetical protein | - |
| IUH71_RS15390 (IUH71_15390) | 29516..29803 | + | 288 | WP_000312841.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IUH71_RS15395 (IUH71_15395) | 30082..30645 | - | 564 | WP_000017403.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| IUH71_RS15400 (IUH71_15400) | 31288..32241 | + | 954 | WP_002287760.1 | IS30 family transposase IS1252 | Transposase |
| IUH71_RS15405 (IUH71_15405) | 32219..33694 | + | 1476 | WP_000443455.1 | RNA-directed DNA polymerase | - |
| IUH71_RS15410 (IUH71_15410) | 34032..34172 | + | 141 | Protein_37 | type I restriction-modification system subunit M N-terminal domain-containing protein | - |
| IUH71_RS15415 (IUH71_15415) | 34231..34911 | - | 681 | WP_001015311.1 | IS6 family transposase IS1216E | Transposase |
| IUH71_RS15420 (IUH71_15420) | 35029..35709 | - | 681 | WP_001015311.1 | IS6 family transposase IS1216E | Transposase |
| IUH71_RS15425 (IUH71_15425) | 35910..36089 | + | 180 | WP_001120991.1 | hypothetical protein | - |
| IUH71_RS15430 (IUH71_15430) | 36220..36489 | + | 270 | WP_000388479.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| IUH71_RS15435 (IUH71_15435) | 36482..36739 | + | 258 | WP_000588503.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| IUH71_RS15440 (IUH71_15440) | 37198..38202 | + | 1005 | WP_000455809.1 | hypothetical protein | - |
| IUH71_RS15445 (IUH71_15445) | 38367..38981 | - | 615 | WP_001261742.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| IUH71_RS15450 (IUH71_15450) | 39431..40756 | + | 1326 | WP_000969590.1 | Y-family DNA polymerase | - |
| IUH71_RS15455 (IUH71_15455) | 40749..41099 | + | 351 | WP_000568378.1 | hypothetical protein | - |
| IUH71_RS15460 (IUH71_15460) | 41096..41275 | + | 180 | WP_001021554.1 | hypothetical protein | - |
| IUH71_RS15465 (IUH71_15465) | 41411..41701 | + | 291 | WP_000026576.1 | hypothetical protein | - |
| IUH71_RS15470 (IUH71_15470) | 42069..42857 | + | 789 | WP_000101106.1 | Sporulation initiation inhibitor protein Soj | VF |
| IUH71_RS15475 (IUH71_15475) | 42844..43170 | + | 327 | WP_000796719.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Enterococcus faecium | Non-Mobilizable plasmid | TA6115 | NC_014959 | 1..39032 | 0.009 |