MGE detailed information
MGE type: Prophage MGE length: 44201 bp
Accession: NZ_CP064385 Location: 691440..735640 Organism: Salmonella enterica subsp. enterica strain PartC-Senterica-RM8376 Replicon: chromosome
Accession: NZ_CP064385 Location: 691440..735640 Organism: Salmonella enterica subsp. enterica strain PartC-Senterica-RM8376 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUJ38_RS03465 () | 686710..688758 | - | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| IUJ38_RS03470 () | 688778..689464 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| IUJ38_RS03475 () | 689562..690059 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| IUJ38_RS03480 () | 690188..691471 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| IUJ38_RS03485 () | 691440..694073 | + | 2634 | WP_001535256.1 | hypothetical protein | VF |
| IUJ38_RS03490 () | 694151..695590 | + | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| IUJ38_RS03495 () | 695708..695944 | + | 237 | WP_024131108.1 | YebV family protein | - |
| IUJ38_RS03500 () | 696055..696246 | + | 192 | WP_000457836.1 | YebW family protein | - |
| IUJ38_RS03505 () | 696265..696915 | - | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| IUJ38_RS03510 () | 697139..697303 | - | 165 | WP_001134856.1 | membrane protein | - |
| IUJ38_RS03515 () | 697588..698310 | - | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| IUJ38_RS03520 () | 698994..699389 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| IUJ38_RS03525 () | 699719..700195 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| IUJ38_RS03530 () | 700583..701002 | - | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| IUJ38_RS03535 () | 701372..701641 | + | 270 | WP_001752421.1 | hypothetical protein | - |
| IUJ38_RS03540 () | 701807..701947 | + | 141 | WP_001617922.1 | hypothetical protein | - |
| IUJ38_RS03545 () | 702093..703287 | - | 1195 | Protein_697 | IS256 family transposase IS285 | Transposase |
| IUJ38_RS03550 () | 703357..703779 | + | 423 | Protein_698 | hypothetical protein ; Integrase | Integrase |
| IUJ38_RS03555 () | 705083..705997 | + | 915 | WP_001233446.1 | DMT family transporter | - |
| IUJ38_RS03560 () | 706130..706288 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| IUJ38_RS03565 () | 706298..706912 | + | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| IUJ38_RS03570 () | 707239..707406 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| IUJ38_RS24125 () | 707400..707546 | + | 147 | WP_001520350.1 | hypothetical protein | - |
| IUJ38_RS03575 () | 708060..708185 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| IUJ38_RS03580 () | 708185..708365 | + | 181 | Protein_705 | IS3 family transposase | - |
| IUJ38_RS03585 () | 708755..708955 | + | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| IUJ38_RS03590 () | 709052..709522 | - | 471 | Protein_707 | tail fiber assembly protein | - |
| IUJ38_RS03595 () | 709532..709876 | - | 345 | Protein_708 | macro domain-containing protein | - |
| IUJ38_RS03600 () | 710091..710351 | - | 261 | Protein_709 | DUF1441 family protein | - |
| IUJ38_RS03605 () | 710406..710594 | + | 189 | WP_001521334.1 | hypothetical protein | - |
| IUJ38_RS03610 () | 710659..710826 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| IUJ38_RS03615 () | 711083..711616 | - | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| IUJ38_RS03620 () | 711670..711861 | - | 192 | Protein_713 | glycoside hydrolase family 19 protein | - |
| IUJ38_RS03625 () | 711850..712311 | + | 462 | Protein_714 | DNA breaking-rejoining protein | - |
| IUJ38_RS03630 () | 712575..713498 | + | 924 | Protein_715 | hypothetical protein ; Integrase | Integrase |
| - | 713627..713772 | + | 146 | - | - | Antitoxin Detail |
| - | 713629..713732 | - | 104 | - | - | Toxin Detail |
| IUJ38_RS03635 () | 713872..714225 | - | 354 | WP_000722368.1 | YebY family protein | - |
| IUJ38_RS03640 () | 714242..715117 | - | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| IUJ38_RS03645 () | 715118..715492 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| IUJ38_RS03650 () | 715630..715860 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| IUJ38_RS03655 () | 715968..716624 | + | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| IUJ38_RS03660 () | 716648..717346 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| IUJ38_RS03665 () | 717381..719432 | - | 2052 | WP_000936999.1 | oligopeptidase B | - |
| IUJ38_RS03670 () | 719645..720304 | - | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| IUJ38_RS03675 () | 720398..720751 | - | 354 | WP_001042119.1 | protein YebF | - |
| IUJ38_RS03680 () | 720819..721109 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| IUJ38_RS03685 () | 721240..722418 | + | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| IUJ38_RS03690 () | 722518..723159 | - | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| IUJ38_RS03695 () | 723197..725008 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| IUJ38_RS03700 () | 725243..726718 | - | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| IUJ38_RS03705 () | 727060..727929 | + | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| IUJ38_RS03710 () | 728053..729495 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| IUJ38_RS03715 () | 729568..730539 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| IUJ38_RS03720 () | 730656..731975 | - | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| IUJ38_RS03725 () | 731991..732935 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| IUJ38_RS03730 () | 733014..733769 | + | 756 | WP_000203014.1 | Zinc import ATP-binding protein ZnuC | VF |
| IUJ38_RS03735 () | 733766..734551 | + | 786 | WP_000571508.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| IUJ38_RS03740 () | 734630..735640 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| IUJ38_RS03745 () | 735649..736260 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| IUJ38_RS03750 () | 736680..737576 | + | 897 | WP_010989032.1 | DUF4034 domain-containing protein | - |
| IUJ38_RS03755 () | 738203..738802 | + | 600 | WP_000716748.1 | YebB family permuted papain-like enzyme | - |
| IUJ38_RS03760 () | 738804..739325 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| IUJ38_RS03765 () | 739362..740102 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| IUJ38_RS03770 () | 740132..740584 | - | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25947 | NC_016810 | 1910986..1947632 | 0.004 |