MGE detailed information
MGE type: IS/Tn MGE length: 459 bp
Accession: NZ_CP064385 Location: 1939945..1940403 Organism: Salmonella enterica subsp. enterica strain PartC-Senterica-RM8376 Replicon: chromosome
Accession: NZ_CP064385 Location: 1939945..1940403 Organism: Salmonella enterica subsp. enterica strain PartC-Senterica-RM8376 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUJ38_RS09565 (1936747) | 1936747..1937331 | - | 585 | WP_001244638.1 | fimbrial protein | - |
| IUJ38_RS09570 (1938050) | 1938050..1938682 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| IUJ38_RS09575 (1938729) | 1938729..1939265 | - | 537 | WP_001038506.1 | STM3031 family outer membrane protein | - |
| IUJ38_RS09580 (1939945) | 1939945..1940403 | - | 459 | WP_000502119.1 | IS200-IS605 family transposase IS200F | Transposase |
| IUJ38_RS09585 (1940783) | 1940783..1941181 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| IUJ38_RS09590 (1941181) | 1941181..1941408 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| IUJ38_RS09595 (1941585) | 1941585..1941836 | + | 252 | WP_001540858.1 | hypothetical protein | - |
| IUJ38_RS09600 (1942111) | 1942111..1942917 | + | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| IUJ38_RS09610 (1943202) | 1943202..1943960 | - | 759 | WP_000244329.1 | amidase activator ActS | - |
| IUJ38_RS09615 (1944225) | 1944225..1944770 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | IS/Tn | TA439 | NC_003197 | 3194324..3194782 | 0 |