MGE detailed information
MGE type: Prophage MGE length: 42915 bp
Accession: NZ_CP064334 Location: 1402002..1444916 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-8 Replicon: chromosome
Accession: NZ_CP064334 Location: 1402002..1444916 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD20_RS06355 () | 1398008..1398499 | - | 492 | WP_172632657.1 | glutathione peroxidase | - |
| IUD20_RS06360 () | 1399344..1400219 | + | 876 | WP_004087352.1 | ABC transporter ATP-binding protein | - |
| IUD20_RS06365 () | 1400216..1401193 | + | 978 | WP_004087353.1 | hypothetical protein | - |
| IUD20_RS06370 () | 1401452..1401898 | + | 447 | WP_004087355.1 | hypothetical protein | - |
| IUD20_RS06375 () | 1402002..1403246 | - | 1245 | WP_011097983.1 | phage tail protein | - |
| IUD20_RS06380 () | 1403250..1403810 | - | 561 | WP_011097869.1 | DUF2612 domain-containing protein | - |
| IUD20_RS06385 () | 1403807..1404952 | - | 1146 | WP_011097984.1 | baseplate J/gp47 family protein | - |
| IUD20_RS06390 () | 1405051..1405347 | + | 297 | WP_004089252.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IUD20_RS06395 () | 1405351..1405656 | + | 306 | WP_004089254.1 | putative addiction module antidote protein | Antitoxin Detail |
| IUD20_RS06400 () | 1405667..1406020 | - | 354 | WP_011097986.1 | hypothetical protein | - |
| IUD20_RS06405 () | 1406017..1406658 | - | 642 | WP_004090764.1 | hypothetical protein | - |
| IUD20_RS06410 () | 1406655..1407485 | - | 831 | WP_004090766.1 | hypothetical protein | - |
| IUD20_RS06415 () | 1407482..1407799 | - | 318 | WP_011097873.1 | hypothetical protein | - |
| IUD20_RS06420 () | 1407799..1408569 | - | 771 | WP_004090769.1 | hypothetical protein | - |
| IUD20_RS06425 () | 1408680..1408907 | + | 228 | WP_004091377.1 | hypothetical protein | Antitoxin Detail |
| IUD20_RS06430 () | 1408891..1409157 | + | 267 | WP_011097988.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IUD20_RS06435 () | 1409168..1411057 | - | 1890 | WP_011097989.1 | hypothetical protein | - |
| IUD20_RS06440 () | 1411014..1411178 | - | 165 | WP_014607750.1 | hypothetical protein | - |
| IUD20_RS06445 () | 1411205..1411627 | - | 423 | WP_004085005.1 | hypothetical protein | - |
| IUD20_RS06450 () | 1411624..1412061 | - | 438 | WP_011097990.1 | DUF3277 family protein | - |
| IUD20_RS06455 () | 1412071..1412292 | - | 222 | Protein_1254 | DUF3383 family protein | - |
| IUD20_RS06460 () | 1412321..1413526 | - | 1206 | Protein_1255 | IS607 family transposase ISCARN56 | Transposase |
| IUD20_RS06465 () | 1413520..1414125 | - | 606 | Protein_1256 | IS607 family transposase | - |
| IUD20_RS06470 () | 1414136..1414735 | + | 600 | WP_080502629.1 | hypothetical protein | - |
| IUD20_RS06475 () | 1414732..1415010 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| IUD20_RS06480 () | 1415012..1415374 | - | 363 | WP_012382646.1 | hypothetical protein | - |
| IUD20_RS06485 () | 1415459..1416877 | + | 1419 | WP_011097622.1 | DEAD/DEAH box helicase | - |
| IUD20_RS06490 () | 1416874..1417038 | + | 165 | WP_012382647.1 | hypothetical protein | - |
| IUD20_RS06495 () | 1417031..1417288 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| IUD20_RS06500 () | 1417278..1418297 | + | 1020 | WP_011097994.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IUD20_RS06505 () | 1418364..1420301 | - | 1938 | WP_004088646.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| IUD20_RS06510 () | 1420463..1422844 | + | 2382 | WP_011097995.1 | TonB-dependent receptor | - |
| IUD20_RS06515 () | 1422934..1423602 | - | 669 | WP_004088644.1 | DsbA family oxidoreductase | - |
| IUD20_RS06520 () | 1424227..1426593 | + | 2367 | WP_011097996.1 | TonB-dependent receptor | - |
| IUD20_RS06525 () | 1427615..1429333 | + | 1719 | WP_011097997.1 | Kef family K(+) transporter | - |
| IUD20_RS06530 () | 1429708..1430802 | + | 1095 | WP_004086092.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| IUD20_RS06535 () | 1430914..1431888 | + | 975 | WP_004086093.1 | phosphate ABC transporter permease subunit PstC | - |
| IUD20_RS06540 () | 1431888..1432751 | + | 864 | WP_004086094.1 | phosphate ABC transporter permease PstA | - |
| IUD20_RS06545 () | 1432772..1433602 | + | 831 | WP_011097998.1 | Phosphate import ATP-binding protein PstB | VF |
| IUD20_RS06550 () | 1433620..1434342 | + | 723 | WP_004086097.1 | phosphate signaling complex protein PhoU | - |
| IUD20_RS06555 () | 1434564..1435196 | + | 633 | WP_004086100.1 | ribonuclease T | - |
| IUD20_RS06560 () | 1435678..1436475 | + | 798 | WP_011098000.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| IUD20_RS06565 () | 1436512..1436895 | + | 384 | WP_004086104.1 | Co2+/Mg2+ efflux protein ApaG | - |
| IUD20_RS06570 () | 1436910..1437797 | + | 888 | WP_011098001.1 | symmetrical bis(5'-nucleosyl)-tetraphosphatase | - |
| IUD20_RS06575 () | 1438341..1439615 | + | 1275 | WP_004088628.1 | lipase | - |
| IUD20_RS06580 () | 1439845..1440594 | - | 750 | WP_004088627.1 | 3-deoxy-D-manno-octulosonic acid kinase | VF |
| IUD20_RS06585 () | 1440616..1441668 | + | 1053 | WP_004088625.1 | Lipopolysaccharide core heptosyltransferase RfaQ | VF |
| IUD20_RS06590 () | 1441686..1442093 | - | 408 | WP_011098003.1 | hypothetical protein | - |
| IUD20_RS06600 () | 1442978..1443670 | + | 693 | WP_011098004.1 | serine/threonine-protein phosphatase | - |
| IUD20_RS06605 () | 1443748..1444467 | - | 720 | WP_004088619.1 | DNA polymerase III subunit epsilon | - |
| IUD20_RS06610 () | 1444464..1444916 | - | 453 | WP_004088617.1 | ribonuclease HI | - |
| IUD20_RS06615 () | 1444930..1445580 | - | 651 | WP_004088616.1 | hypothetical protein | - |
| IUD20_RS06620 () | 1445592..1446368 | + | 777 | WP_011098005.1 | hydroxyacylglutathione hydrolase | - |
| IUD20_RS06625 () | 1446712..1446942 | + | 231 | WP_004088612.1 | EexN family lipoprotein | - |
| IUD20_RS06630 () | 1447788..1448015 | + | 228 | WP_004088610.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|