MGE detailed information
MGE type: Prophage MGE length: 42915 bp
Accession: NZ_CP064332 Location: 1402592..1445506 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-11 Replicon: chromosome
Accession: NZ_CP064332 Location: 1402592..1445506 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD21_RS06360 () | 1398598..1399089 | - | 492 | WP_172632657.1 | glutathione peroxidase | - |
| IUD21_RS06365 () | 1399934..1400809 | + | 876 | WP_004087352.1 | ABC transporter ATP-binding protein | - |
| IUD21_RS06370 () | 1400806..1401783 | + | 978 | WP_004087353.1 | hypothetical protein | - |
| IUD21_RS06375 () | 1402042..1402488 | + | 447 | WP_004087355.1 | hypothetical protein | - |
| IUD21_RS06380 () | 1402592..1403836 | - | 1245 | WP_011097983.1 | phage tail protein | - |
| IUD21_RS06385 () | 1403840..1404400 | - | 561 | WP_011097869.1 | DUF2612 domain-containing protein | - |
| IUD21_RS06390 () | 1404397..1405542 | - | 1146 | WP_011097984.1 | baseplate J/gp47 family protein | - |
| IUD21_RS06395 () | 1405641..1405937 | + | 297 | WP_004089252.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IUD21_RS06400 () | 1405941..1406246 | + | 306 | WP_004089254.1 | putative addiction module antidote protein | Antitoxin Detail |
| IUD21_RS06405 () | 1406257..1406610 | - | 354 | WP_011097986.1 | hypothetical protein | - |
| IUD21_RS06410 () | 1406607..1407248 | - | 642 | WP_004090764.1 | hypothetical protein | - |
| IUD21_RS06415 () | 1407245..1408075 | - | 831 | WP_004090766.1 | hypothetical protein | - |
| IUD21_RS06420 () | 1408072..1408389 | - | 318 | WP_011097873.1 | hypothetical protein | - |
| IUD21_RS06425 () | 1408389..1409159 | - | 771 | WP_004090769.1 | hypothetical protein | - |
| IUD21_RS06430 () | 1409270..1409497 | + | 228 | WP_004091377.1 | hypothetical protein | Antitoxin Detail |
| IUD21_RS06435 () | 1409481..1409747 | + | 267 | WP_011097988.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IUD21_RS06440 () | 1409758..1411647 | - | 1890 | WP_011097989.1 | hypothetical protein | - |
| IUD21_RS06445 () | 1411604..1411768 | - | 165 | WP_014607750.1 | hypothetical protein | - |
| IUD21_RS06450 () | 1411795..1412217 | - | 423 | WP_004085005.1 | hypothetical protein | - |
| IUD21_RS06455 () | 1412214..1412651 | - | 438 | WP_011097990.1 | DUF3277 family protein | - |
| IUD21_RS06460 () | 1412661..1412882 | - | 222 | Protein_1255 | DUF3383 family protein | - |
| IUD21_RS06465 () | 1412911..1414116 | - | 1206 | Protein_1256 | IS607 family transposase ISCARN56 | Transposase |
| IUD21_RS06470 () | 1414110..1414715 | - | 606 | Protein_1257 | IS607 family transposase | - |
| IUD21_RS06475 () | 1414726..1415325 | + | 600 | WP_080502629.1 | hypothetical protein | - |
| IUD21_RS06480 () | 1415322..1415600 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| IUD21_RS06485 () | 1415602..1415964 | - | 363 | WP_012382646.1 | hypothetical protein | - |
| IUD21_RS06490 () | 1416049..1417467 | + | 1419 | WP_011097622.1 | DEAD/DEAH box helicase | - |
| IUD21_RS06495 () | 1417464..1417628 | + | 165 | WP_012382647.1 | hypothetical protein | - |
| IUD21_RS06500 () | 1417621..1417878 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| IUD21_RS06505 () | 1417868..1418887 | + | 1020 | WP_011097994.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IUD21_RS06510 () | 1418954..1420891 | - | 1938 | WP_004088646.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| IUD21_RS06515 () | 1421053..1423434 | + | 2382 | WP_011097995.1 | TonB-dependent receptor | - |
| IUD21_RS06520 () | 1423524..1424192 | - | 669 | WP_004088644.1 | DsbA family oxidoreductase | - |
| IUD21_RS06525 () | 1424817..1427183 | + | 2367 | WP_011097996.1 | TonB-dependent receptor | - |
| IUD21_RS06530 () | 1428205..1429923 | + | 1719 | WP_011097997.1 | Kef family K(+) transporter | - |
| IUD21_RS06535 () | 1430298..1431392 | + | 1095 | WP_004086092.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| IUD21_RS06540 () | 1431504..1432478 | + | 975 | WP_004086093.1 | phosphate ABC transporter permease subunit PstC | - |
| IUD21_RS06545 () | 1432478..1433341 | + | 864 | WP_004086094.1 | phosphate ABC transporter permease PstA | - |
| IUD21_RS06550 () | 1433362..1434192 | + | 831 | WP_011097998.1 | Phosphate import ATP-binding protein PstB | VF |
| IUD21_RS06555 () | 1434210..1434932 | + | 723 | WP_004086097.1 | phosphate signaling complex protein PhoU | - |
| IUD21_RS06560 () | 1435154..1435786 | + | 633 | WP_004086100.1 | ribonuclease T | - |
| IUD21_RS06565 () | 1436268..1437065 | + | 798 | WP_011098000.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| IUD21_RS06570 () | 1437102..1437485 | + | 384 | WP_004086104.1 | Co2+/Mg2+ efflux protein ApaG | - |
| IUD21_RS06575 () | 1437500..1438387 | + | 888 | WP_011098001.1 | symmetrical bis(5'-nucleosyl)-tetraphosphatase | - |
| IUD21_RS06580 () | 1438931..1440205 | + | 1275 | WP_004088628.1 | lipase | - |
| IUD21_RS06585 () | 1440435..1441184 | - | 750 | WP_004088627.1 | 3-deoxy-D-manno-octulosonic acid kinase | VF |
| IUD21_RS06590 () | 1441206..1442258 | + | 1053 | WP_004088625.1 | Lipopolysaccharide core heptosyltransferase RfaQ | VF |
| IUD21_RS06595 () | 1442276..1442683 | - | 408 | WP_011098003.1 | hypothetical protein | - |
| IUD21_RS06605 () | 1443568..1444260 | + | 693 | WP_011098004.1 | serine/threonine-protein phosphatase | - |
| IUD21_RS06610 () | 1444338..1445057 | - | 720 | WP_004088619.1 | DNA polymerase III subunit epsilon | - |
| IUD21_RS06615 () | 1445054..1445506 | - | 453 | WP_004088617.1 | ribonuclease HI | - |
| IUD21_RS06620 () | 1445520..1446170 | - | 651 | WP_004088616.1 | hypothetical protein | - |
| IUD21_RS06625 () | 1446182..1446958 | + | 777 | WP_011098005.1 | hydroxyacylglutathione hydrolase | - |
| IUD21_RS06630 () | 1446868..1447230 | - | 363 | WP_192443651.1 | hypothetical protein | - |
| IUD21_RS06635 () | 1447302..1447532 | + | 231 | WP_004088612.1 | EexN family lipoprotein | - |
| IUD21_RS06640 () | 1448378..1448605 | + | 228 | WP_004088610.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|