MGE detailed information
MGE type: Prophage MGE length: 22834 bp
Accession: NZ_CP064330 Location: 445939..468772 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-13 Replicon: chromosome
Accession: NZ_CP064330 Location: 445939..468772 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD22_RS01795 () | 441311..443101 | + | 1791 | WP_004089284.1 | succinate dehydrogenase flavoprotein subunit | - |
| IUD22_RS01800 () | 443122..443907 | + | 786 | WP_004089282.1 | succinate dehydrogenase iron-sulfur subunit | - |
| IUD22_RS01805 () | 444028..444276 | + | 249 | WP_004089280.1 | succinate dehydrogenase assembly factor 2 | - |
| IUD22_RS01810 () | 444299..444679 | + | 381 | WP_011097604.1 | hypothetical protein | - |
| IUD22_RS01815 () | 444705..445946 | + | 1242 | WP_004089276.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| IUD22_RS01820 () | 445939..446661 | + | 723 | WP_004089270.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| IUD22_RS01825 () | 447009..449486 | + | 2478 | WP_038231910.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| IUD22_RS01830 () | 449471..450133 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| IUD22_RS01835 () | 450138..450575 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| IUD22_RS01840 () | 450593..452341 | + | 1749 | WP_004089264.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| IUD22_RS01845 () | 452338..453357 | + | 1020 | WP_004089261.1 | Tetraacyldisaccharide 4'-kinase | VF |
| IUD22_RS01850 () | 453764..454483 | - | 720 | Protein_346 | phage late control D family protein | - |
| IUD22_RS01855 () | 454383..455354 | - | 972 | WP_011097609.1 | hypothetical protein | - |
| IUD22_RS01860 () | 455362..455919 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| IUD22_RS01865 () | 455912..456805 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| IUD22_RS01870 () | 456805..457143 | - | 339 | WP_004090694.1 | GPW/gp25 family protein | - |
| IUD22_RS01875 () | 457341..457622 | + | 282 | WP_004090695.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IUD22_RS01880 () | 457633..457908 | + | 276 | WP_004085172.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| IUD22_RS01885 () | 457996..458298 | + | 303 | WP_004090696.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| IUD22_RS01890 () | 458301..458702 | + | 402 | WP_004090697.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| IUD22_RS01895 () | 458771..459358 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| IUD22_RS01900 () | 459355..459897 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| IUD22_RS01905 () | 459873..460394 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| IUD22_RS01910 () | 460391..460714 | - | 324 | WP_011097935.1 | hypothetical protein | - |
| IUD22_RS01915 () | 460714..460974 | - | 261 | WP_011097616.1 | hypothetical protein | - |
| IUD22_RS01920 () | 460992..462866 | - | 1875 | WP_011097617.1 | phage major capsid protein | - |
| IUD22_RS01925 () | 462863..463495 | - | 633 | WP_194957365.1 | phage portal protein | - |
| IUD22_RS01930 () | 463450..464010 | + | 561 | WP_080502611.1 | hypothetical protein | - |
| IUD22_RS01935 () | 464007..464285 | + | 279 | WP_011097620.1 | VRR-NUC domain-containing protein | - |
| IUD22_RS01940 () | 464287..464595 | - | 309 | WP_011097621.1 | hypothetical protein | - |
| IUD22_RS01945 () | 464680..466098 | + | 1419 | WP_011097622.1 | DEAD/DEAH box helicase | - |
| IUD22_RS01950 () | 466095..466349 | + | 255 | WP_011097623.1 | DUF4224 domain-containing protein | - |
| IUD22_RS01955 () | 466339..467358 | + | 1020 | WP_011097624.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IUD22_RS01960 () | 468131..468772 | + | 642 | WP_011097625.1 | Chromosome-partitioning ATPase Soj | VF |
| IUD22_RS01965 () | 468800..469276 | + | 477 | WP_004089961.1 | histidine phosphatase family protein | - |
| IUD22_RS01970 () | 469281..469853 | + | 573 | WP_011097627.1 | YceI family protein | - |
| IUD22_RS01975 () | 469850..471808 | + | 1959 | WP_011097628.1 | phospholipase D family protein | - |
| IUD22_RS01980 () | 472741..473130 | - | 390 | WP_004089975.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|