MGE detailed information
MGE type: Prophage MGE length: 34373 bp
Accession: NZ_CP064325 Location: 446878..481250 Organism: Xylella fastidiosa subsp. multiplex strain Red Oak Replicon: chromosome
Accession: NZ_CP064325 Location: 446878..481250 Organism: Xylella fastidiosa subsp. multiplex strain Red Oak Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD24_RS01775 () | 442245..442967 | + | 723 | WP_004085191.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| IUD24_RS01780 () | 443315..445792 | + | 2478 | WP_012337634.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| IUD24_RS01785 () | 445777..446439 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| IUD24_RS01790 () | 446444..446881 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| IUD24_RS01795 () | 446899..448647 | + | 1749 | WP_004085187.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| IUD24_RS01800 () | 448644..449663 | + | 1020 | WP_004085186.1 | Tetraacyldisaccharide 4'-kinase | VF |
| IUD24_RS01805 () | 450038..451120 | - | 1083 | WP_012337635.1 | phage late control D family protein | - |
| IUD24_RS01810 () | 451111..451329 | - | 219 | WP_004085341.1 | tail protein X | - |
| IUD24_RS01815 () | 451326..451808 | - | 483 | WP_012337636.1 | phage tail protein | - |
| IUD24_RS01820 () | 451805..454024 | - | 2220 | WP_012337637.1 | phage tail tape measure protein | - |
| IUD24_RS01825 () | 454151..454438 | - | 288 | WP_012337638.1 | phage tail assembly protein | - |
| IUD24_RS01830 () | 454441..454950 | - | 510 | WP_012337639.1 | phage major tail tube protein | - |
| IUD24_RS01835 () | 454950..456128 | - | 1179 | WP_012337640.1 | phage tail sheath family protein | - |
| IUD24_RS01840 () | 456192..457784 | - | 1593 | WP_012337641.1 | tail fiber domain-containing protein | - |
| IUD24_RS01845 () | 457792..458349 | - | 558 | WP_012337642.1 | phage tail protein I | - |
| IUD24_RS01850 () | 458342..459235 | - | 894 | WP_012337643.1 | baseplate J/gp47 family protein | - |
| IUD24_RS01855 () | 459235..459573 | - | 339 | WP_004088650.1 | GPW/gp25 family protein | - |
| IUD24_RS01860 () | 459681..459962 | + | 282 | WP_004087027.1 | XRE family transcriptional regulator | - |
| IUD24_RS01865 () | 459974..460273 | + | 300 | WP_004087025.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| IUD24_RS01870 () | 460330..460611 | + | 282 | WP_004085174.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IUD24_RS01875 () | 460622..460897 | + | 276 | WP_012337645.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| IUD24_RS01880 () | 460902..461489 | - | 588 | WP_012337646.1 | phage baseplate assembly protein V | - |
| IUD24_RS01885 () | 461486..462028 | - | 543 | WP_012337647.1 | hypothetical protein | - |
| IUD24_RS01890 () | 462004..462525 | - | 522 | WP_012337648.1 | hypothetical protein | - |
| IUD24_RS01895 () | 462522..462845 | - | 324 | WP_012337649.1 | hypothetical protein | - |
| IUD24_RS01900 () | 462823..463104 | - | 282 | WP_194957557.1 | hypothetical protein | - |
| IUD24_RS01905 () | 463122..464995 | - | 1874 | Protein_357 | phage major capsid protein | - |
| IUD24_RS01910 () | 464992..466578 | - | 1587 | WP_012337652.1 | phage portal protein | - |
| IUD24_RS01915 () | 466575..467123 | - | 549 | WP_012337653.1 | hypothetical protein | - |
| IUD24_RS01920 () | 467127..469079 | - | 1953 | WP_012337654.1 | phage terminase large subunit family protein | - |
| IUD24_RS01925 () | 469072..469647 | - | 576 | WP_012337655.1 | terminase small subunit | - |
| IUD24_RS01930 () | 469778..470002 | - | 225 | WP_012337656.1 | hypothetical protein | - |
| IUD24_RS01935 () | 470004..470465 | - | 462 | WP_012337657.1 | hypothetical protein | - |
| IUD24_RS01940 () | 470455..470784 | - | 330 | WP_012337658.1 | phage holin family protein | - |
| IUD24_RS01945 () | 470777..471277 | - | 501 | WP_012337659.1 | lysozyme | - |
| IUD24_RS01950 () | 471377..472108 | - | 732 | WP_012337660.1 | site-specific DNA-methyltransferase | - |
| IUD24_RS01955 () | 472298..472633 | - | 336 | WP_004085025.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| IUD24_RS01960 () | 472630..472884 | - | 255 | WP_004089517.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| IUD24_RS01965 () | 472937..473659 | - | 723 | WP_012337661.1 | hypothetical protein | - |
| IUD24_RS01970 () | 473602..473949 | - | 348 | WP_162010044.1 | hypothetical protein | - |
| IUD24_RS01975 () | 474197..475405 | + | 1209 | Protein_371 | DNA polymerase | - |
| IUD24_RS01980 () | 475402..475680 | + | 279 | WP_012337663.1 | VRR-NUC domain-containing protein | - |
| IUD24_RS01985 () | 475682..475987 | - | 306 | WP_012337664.1 | hypothetical protein | - |
| IUD24_RS01990 () | 476072..477490 | + | 1419 | WP_012337665.1 | DEAD/DEAH box helicase | - |
| IUD24_RS01995 () | 477487..477732 | + | 246 | WP_012337666.1 | DUF4224 domain-containing protein | - |
| IUD24_RS02000 () | 477732..478751 | + | 1020 | WP_012337667.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IUD24_RS02005 () | 479528..480169 | + | 642 | WP_004085684.1 | Chromosome-partitioning ATPase Soj | VF |
| IUD24_RS02010 () | 480197..480673 | + | 477 | WP_004085683.1 | histidine phosphatase family protein | - |
| IUD24_RS02015 () | 480678..481250 | + | 573 | WP_004085682.1 | YceI family protein | - |
| IUD24_RS02020 () | 481247..483205 | + | 1959 | WP_038231298.1 | phospholipase D family protein | - |
| IUD24_RS02025 () | 484189..484581 | - | 393 | WP_071869548.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|