MGE detailed information
MGE type: Prophage MGE length: 50946 bp
Accession: NZ_CP064325 Location: 1212106..1263051 Organism: Xylella fastidiosa subsp. multiplex strain Red Oak Replicon: chromosome
Accession: NZ_CP064325 Location: 1212106..1263051 Organism: Xylella fastidiosa subsp. multiplex strain Red Oak Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD24_RS05215 () | 1208224..1209009 | + | 786 | WP_010894307.1 | undecaprenyl-diphosphate phosphatase | - |
| IUD24_RS05220 () | 1209177..1209890 | - | 714 | WP_004084858.1 | YceI family protein | - |
| IUD24_RS05225 () | 1210349..1211308 | + | 960 | WP_004084859.1 | mitochondrial fission ELM1 family protein | - |
| IUD24_RS05230 () | 1211344..1211624 | + | 281 | Protein_1014 | hypothetical protein | - |
| IUD24_RS05235 () | 1211780..1211974 | - | 195 | Protein_1015 | helix-turn-helix domain-containing protein | - |
| IUD24_RS05240 () | 1212106..1213188 | - | 1083 | WP_012337635.1 | phage late control D family protein | - |
| IUD24_RS05245 () | 1213179..1213397 | - | 219 | WP_004085341.1 | tail protein X | - |
| IUD24_RS05250 () | 1213394..1213876 | - | 483 | WP_012337636.1 | phage tail protein | - |
| IUD24_RS05255 () | 1213873..1216092 | - | 2220 | WP_012337637.1 | phage tail tape measure protein | - |
| IUD24_RS05260 () | 1216219..1216506 | - | 288 | WP_012337638.1 | phage tail assembly protein | - |
| IUD24_RS05265 () | 1216509..1217018 | - | 510 | WP_012337639.1 | phage major tail tube protein | - |
| IUD24_RS05270 () | 1217018..1218196 | - | 1179 | WP_012337640.1 | phage tail sheath family protein | - |
| IUD24_RS05275 () | 1218260..1219852 | - | 1593 | WP_012337641.1 | tail fiber domain-containing protein | - |
| IUD24_RS05280 () | 1219860..1220417 | - | 558 | WP_012337642.1 | phage tail protein I | - |
| IUD24_RS05285 () | 1220410..1221303 | - | 894 | WP_012337643.1 | baseplate J/gp47 family protein | - |
| IUD24_RS05290 () | 1221303..1221641 | - | 339 | WP_004088650.1 | GPW/gp25 family protein | - |
| IUD24_RS05295 () | 1221749..1222030 | + | 282 | WP_004087027.1 | XRE family transcriptional regulator | - |
| IUD24_RS05300 () | 1222042..1222341 | + | 300 | WP_004087025.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| IUD24_RS05305 () | 1222398..1222679 | + | 282 | WP_004085174.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IUD24_RS05310 () | 1222690..1222965 | + | 276 | WP_012337645.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| IUD24_RS05315 () | 1222970..1223557 | - | 588 | WP_012337646.1 | phage baseplate assembly protein V | - |
| IUD24_RS05320 () | 1223554..1224096 | - | 543 | WP_012337647.1 | hypothetical protein | - |
| IUD24_RS05325 () | 1224072..1224593 | - | 522 | WP_012337648.1 | hypothetical protein | - |
| IUD24_RS05330 () | 1224590..1224913 | - | 324 | WP_012337649.1 | hypothetical protein | - |
| IUD24_RS05335 () | 1224913..1225173 | - | 261 | WP_012337650.1 | hypothetical protein | - |
| IUD24_RS05340 () | 1225191..1227065 | - | 1875 | WP_012337651.1 | phage major capsid protein | - |
| IUD24_RS05345 () | 1227062..1228648 | - | 1587 | WP_012337652.1 | phage portal protein | - |
| IUD24_RS05350 () | 1228645..1229193 | - | 549 | WP_012337653.1 | hypothetical protein | - |
| IUD24_RS05355 () | 1229197..1231149 | - | 1953 | WP_012337654.1 | phage terminase large subunit family protein | - |
| IUD24_RS05360 () | 1231142..1231717 | - | 576 | WP_012337655.1 | terminase small subunit | - |
| IUD24_RS05365 () | 1231848..1232072 | - | 225 | WP_012337656.1 | hypothetical protein | - |
| IUD24_RS05370 () | 1232074..1232535 | - | 462 | WP_012337657.1 | hypothetical protein | - |
| IUD24_RS05375 () | 1232525..1232854 | - | 330 | WP_012337658.1 | phage holin family protein | - |
| IUD24_RS05380 () | 1232847..1233347 | - | 501 | WP_012337849.1 | lysozyme | - |
| IUD24_RS05385 () | 1233314..1233931 | - | 618 | WP_012337850.1 | hypothetical protein | - |
| IUD24_RS05390 () | 1233965..1234162 | - | 198 | WP_021358648.1 | hypothetical protein | - |
| IUD24_RS05395 () | 1234629..1237157 | - | 2529 | WP_012337851.1 | primase | - |
| IUD24_RS05400 () | 1237294..1237875 | - | 582 | WP_012337852.1 | Bro-N domain-containing protein | - |
| IUD24_RS05405 () | 1238135..1238518 | - | 384 | WP_012337854.1 | hypothetical protein | - |
| IUD24_RS05410 () | 1238606..1238935 | - | 330 | WP_021358651.1 | hypothetical protein | - |
| IUD24_RS05415 () | 1238925..1239170 | - | 246 | WP_012337855.1 | hypothetical protein | - |
| IUD24_RS05420 () | 1239169..1239948 | + | 780 | WP_021358652.1 | helix-turn-helix transcriptional regulator | - |
| IUD24_RS05425 () | 1239999..1240610 | - | 612 | WP_004087040.1 | Fic/DOC family protein | Toxin Detail |
| IUD24_RS05430 () | 1240607..1240795 | - | 189 | WP_004087046.1 | antitoxin VbhA family protein | Antitoxin Detail |
| IUD24_RS05435 () | 1241176..1241580 | + | 405 | WP_012337857.1 | hypothetical protein | - |
| IUD24_RS05440 () | 1241577..1242038 | + | 462 | WP_012337858.1 | DUF1566 domain-containing protein | - |
| IUD24_RS05445 () | 1242035..1242442 | + | 408 | WP_012337859.1 | hypothetical protein | - |
| IUD24_RS05450 () | 1242439..1242630 | + | 192 | WP_004086069.1 | hypothetical protein | - |
| IUD24_RS05455 () | 1242662..1243231 | - | 570 | WP_012337860.1 | DEAD/DEAH box helicase | - |
| IUD24_RS05460 () | 1243316..1243720 | + | 405 | WP_004085029.1 | hypothetical protein | - |
| IUD24_RS05465 () | 1243722..1244000 | - | 279 | WP_012337663.1 | VRR-NUC domain-containing protein | - |
| IUD24_RS05470 () | 1243997..1246177 | - | 2181 | WP_012337861.1 | DNA polymerase | - |
| IUD24_RS05475 () | 1246179..1247345 | - | 1167 | WP_031345946.1 | Bro-N domain-containing protein | - |
| IUD24_RS05480 () | 1247432..1247998 | - | 567 | WP_012337863.1 | DUF2815 family protein | - |
| IUD24_RS05485 () | 1247998..1249275 | - | 1278 | WP_012337864.1 | DUF2800 domain-containing protein | - |
| IUD24_RS05490 () | 1249272..1249769 | - | 498 | WP_012337865.1 | hypothetical protein | - |
| IUD24_RS05495 () | 1249759..1249953 | - | 195 | WP_004086187.1 | hypothetical protein | - |
| IUD24_RS05500 () | 1250142..1251017 | + | 876 | Protein_1068 | DEAD/DEAH box helicase | - |
| IUD24_RS05505 () | 1251014..1251259 | + | 246 | WP_012337666.1 | DUF4224 domain-containing protein | - |
| IUD24_RS05510 () | 1251259..1252278 | + | 1020 | WP_012337868.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IUD24_RS05515 () | 1252370..1253011 | + | 642 | Protein_1071 | DUF2145 domain-containing protein | - |
| IUD24_RS05520 () | 1253008..1253562 | + | 555 | WP_012337870.1 | hypothetical protein | - |
| IUD24_RS05525 () | 1254001..1255206 | + | 1206 | WP_038231125.1 | Enoyl-[acyl-carrier-protein] reductase [NADH] | VF |
| IUD24_RS05530 () | 1255406..1255870 | + | 465 | WP_004084863.1 | thioredoxin family protein | - |
| IUD24_RS05535 () | 1256060..1257718 | - | 1659 | WP_004084864.1 | ubiquinone biosynthesis regulatory protein kinase UbiB | - |
| IUD24_RS05540 () | 1257715..1258362 | - | 648 | WP_004084865.1 | SCP2 domain-containing protein | - |
| IUD24_RS05545 () | 1258511..1259362 | + | 852 | WP_004084866.1 | formyltetrahydrofolate deformylase | - |
| IUD24_RS05550 () | 1259681..1261009 | + | 1329 | WP_012337871.1 | GTP-binding protein | - |
| IUD24_RS05555 () | 1261174..1261836 | + | 663 | WP_038211368.1 | hypothetical protein | VF |
| IUD24_RS05560 () | 1261879..1263051 | + | 1173 | WP_004084869.1 | cell division protein ZapE | - |
| IUD24_RS05565 () | 1263227..1263658 | + | 432 | WP_004084870.1 | organic hydroperoxide resistance protein | - |
| IUD24_RS05570 () | 1263908..1264906 | + | 999 | WP_004084871.1 | NAD-dependent epimerase/dehydratase family protein | - |
| IUD24_RS05575 () | 1265281..1267464 | + | 2184 | WP_004084872.1 | carboxy terminal-processing peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|