MGE detailed information
MGE type: Conjugative plasmid MGE length: 89958 bp
Accession: NZ_CP063855 Location: 1..89958 Organism: Klebsiella pneumoniae strain M1023-4Ar Replicon: plasmid pM1023-4Ar.4
Accession: NZ_CP063855 Location: 1..89958 Organism: Klebsiella pneumoniae strain M1023-4Ar Replicon: plasmid pM1023-4Ar.4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IOD43_RS27375 () | 126..857 | + | 732 | WP_021559024.1 | complement resistance protein TraT | - |
| IOD43_RS27380 () | 1060..1793 | + | 734 | Protein_2 | hypothetical protein | - |
| IOD43_RS27385 () | 1844..4042 | + | 2199 | WP_011402783.1 | type IV conjugative transfer system coupling protein TraD | - |
| IOD43_RS27390 () | 4042..9312 | + | 5271 | WP_061093447.1 | Multifunctional conjugation protein TraI | Relaxase |
| IOD43_RS27395 () | 9332..10078 | + | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| IOD43_RS27400 () | 10133..10693 | + | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| IOD43_RS27405 () | 10825..11025 | + | 201 | WP_015059022.1 | hypothetical protein | - |
| IOD43_RS27410 () | 11411..12010 | + | 600 | WP_032083981.1 | hypothetical protein | - |
| - () | 12605..12664 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 12605..12664 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 12605..12664 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 12605..12664 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| IOD43_RS27415 () | 12709..12858 | + | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| IOD43_RS27420 () | 13142..13390 | + | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| IOD43_RS27425 () | 13635..13709 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| IOD43_RS27430 () | 13702..14559 | + | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| IOD43_RS27435 () | 15498..16151 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| IOD43_RS27440 () | 16244..16501 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| IOD43_RS27445 () | 16434..16835 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| IOD43_RS27450 () | 17084..17499 | + | 416 | Protein_16 | IS1 family transposase IS1R | Transposase |
| IOD43_RS27455 () | 17535..18080 | - | 546 | Protein_17 | Tn3 family transposase TnpA_Tn3 | Transposase |
| IOD43_RS27460 () | 18146..18849 | - | 704 | Protein_18 | IS6 family transposase IS15DII | Transposase |
| IOD43_RS27465 () | 18885..19997 | + | 1113 | WP_172690575.1 | IS91 family transposase ISVsa3 | Transposase |
| IOD43_RS27470 () | 20028..20912 | + | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| IOD43_RS27475 () | 21129..22343 | + | 1215 | WP_194315428.1 | Bicyclomycin resistance protein | ARG |
| IOD43_RS27480 () | 22371..22676 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| IOD43_RS27485 () | 22788..22976 | + | 189 | Protein_23 | IS91 family transposase | - |
| IOD43_RS27490 () | 22943..24142 | - | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| IOD43_RS27495 () | 24248..24898 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| IOD43_RS27500 () | 24930..25172 | - | 243 | WP_000844627.1 | transposase | - |
| IOD43_RS27505 () | 25478..26314 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| IOD43_RS27510 () | 26314..27117 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| IOD43_RS27515 () | 27178..27993 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| IOD43_RS27520 () | 28323..28499 | + | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| IOD43_RS27525 () | 28681..29685 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| IOD43_RS27530 () | 29764..31530 | - | 1767 | Protein_32 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| IOD43_RS27535 () | 31582..31758 | - | 177 | Protein_33 | IS6 family transposase IS26 | Transposase |
| IOD43_RS27540 () | 31747..32550 | + | 804 | Protein_34 | Mobilization protein A | Relaxase |
| IOD43_RS27545 () | 32563..33147 | + | 585 | WP_023281055.1 | mobilization protein MobX | - |
| IOD43_RS27550 () | 33190..35826 | - | 2637 | WP_023281054.1 | DEAD/DEAH box helicase family protein | - |
| IOD43_RS27555 () | 35831..37879 | - | 2049 | WP_023281053.1 | site-specific DNA-methyltransferase | - |
| IOD43_RS27560 () | 38128..38331 | - | 204 | WP_001567330.1 | hypothetical protein | - |
| IOD43_RS27565 () | 38374..38781 | - | 408 | WP_001567331.1 | hypothetical protein | - |
| IOD43_RS27570 () | 38853..39317 | - | 465 | WP_186185541.1 | hypothetical protein | - |
| IOD43_RS27575 () | 39308..40011 | + | 704 | Protein_41 | IS6 family transposase IS26 | Transposase |
| IOD43_RS27580 () | 40021..40491 | + | 471 | WP_049824851.1 | TetR family transcriptional regulator | - |
| IOD43_RS27585 () | 40511..41299 | + | 789 | WP_014839978.1 | winged helix-turn-helix domain-containing protein | - |
| IOD43_RS27590 () | 41299..41817 | + | 519 | WP_014839979.1 | hypothetical protein | - |
| IOD43_RS27595 () | 41822..42238 | - | 417 | WP_014839980.1 | Glutathione transferase FosA | ARG |
| IOD43_RS27600 () | 42624..43327 | + | 704 | Protein_46 | IS6 family transposase IS15DII | Transposase |
| IOD43_RS27605 () | 43377..44120 | + | 744 | Protein_47 | Beta-lactamase TEM | ARG |
| IOD43_RS27610 () | 44379..44855 | + | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| IOD43_RS27615 () | 44902..45777 | - | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| IOD43_RS27620 () | 46199..46903 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IOD43_RS27625 () | 46969..47034 | + | 66 | Protein_51 | IS1 family transposase | - |
| IOD43_RS27630 () | 48483..48717 | + | 235 | Protein_52 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IOD43_RS27635 () | 48845..49126 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| IOD43_RS27640 () | 49249..49599 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| IOD43_RS27645 () | 49602..50564 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| IOD43_RS27650 () | 50711..51004 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| IOD43_RS27655 () | 51081..51764 | + | 684 | WP_000085883.1 | DNA methylase | - |
| IOD43_RS27660 () | 51765..51986 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| IOD43_RS27665 () | 52000..52434 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| IOD43_RS27670 () | 52485..53261 | + | 777 | WP_001383963.1 | hypothetical protein | - |
| IOD43_RS27675 () | 53679..54104 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| IOD43_RS27680 () | 54151..54573 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| IOD43_RS27685 () | 54570..54761 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| IOD43_RS27690 () | 55799..56029 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| IOD43_RS27695 () | 56081..57442 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| IOD43_RS27700 () | 57489..58052 | + | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| IOD43_RS27705 () | 58901..59428 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| IOD43_RS27710 () | 59486..59719 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| IOD43_RS27715 () | 59780..61748 | + | 1969 | Protein_69 | ParB/RepB/Spo0J family partition protein | - |
| IOD43_RS27720 () | 61817..62251 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| IOD43_RS27725 () | 62248..62967 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 62979..63203 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 62979..63203 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 62979..63203 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 62979..63203 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 63136..63201 | - | 66 | - | - | Antitoxin Detail |
| IOD43_RS27730 () | 63247..63405 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| IOD43_RS27735 () | 63643..64020 | - | 378 | Protein_73 | hypothetical protein | - |
| IOD43_RS27740 () | 64320..64616 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| IOD43_RS27745 () | 64727..65548 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| IOD43_RS27750 () | 65845..66492 | - | 648 | WP_015059008.1 | hypothetical protein | VF |
| IOD43_RS27755 () | 66769..67152 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| IOD43_RS27760 () | 67343..68029 | + | 687 | WP_015059009.1 | PAS domain-containing protein | - |
| IOD43_RS27765 () | 68123..68350 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| IOD43_RS27770 () | 68384..68749 | + | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| IOD43_RS27775 () | 68764..69075 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| IOD43_RS27780 () | 69097..69663 | + | 567 | WP_000399794.1 | type IV conjugative transfer system protein TraE | - |
| IOD43_RS27785 () | 69674..70378 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| IOD43_RS27790 () | 70378..71803 | + | 1426 | Protein_84 | conjugal transfer protein TraB | - |
| IOD43_RS27795 () | 71793..72383 | + | 591 | WP_000002778.1 | conjugal transfer protein TraP | - |
| IOD43_RS27800 () | 72337..72567 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| IOD43_RS27805 () | 72579..72830 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| IOD43_RS27810 () | 72827..73342 | + | 516 | WP_000809902.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IOD43_RS27815 () | 73477..73698 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| IOD43_RS27820 () | 73858..76485 | + | 2628 | WP_015059012.1 | type IV secretion system protein TraC | - |
| IOD43_RS27825 () | 76482..76868 | + | 387 | WP_015059013.1 | type-F conjugative transfer system protein TrbI | - |
| IOD43_RS27830 () | 76865..77497 | + | 633 | WP_001203735.1 | type-F conjugative transfer system protein TraW | - |
| IOD43_RS27835 () | 77494..78486 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| IOD43_RS27840 () | 78513..78821 | + | 309 | WP_000412447.1 | hypothetical protein | - |
| IOD43_RS27845 () | 78884..79405 | + | 522 | WP_015059014.1 | hypothetical protein | - |
| IOD43_RS27850 () | 79432..80070 | + | 639 | WP_000087532.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IOD43_RS27855 () | 80067..80438 | + | 372 | WP_000056336.1 | hypothetical protein | - |
| IOD43_RS27860 () | 80464..80886 | + | 423 | WP_001229309.1 | HNH endonuclease | - |
| IOD43_RS27865 () | 80883..82733 | + | 1851 | WP_015059015.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IOD43_RS27870 () | 82760..83017 | + | 258 | WP_053913405.1 | conjugal transfer protein TrbE | - |
| IOD43_RS27875 () | 83004..83753 | + | 750 | WP_072354014.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IOD43_RS27880 () | 83869..84150 | + | 282 | WP_000549793.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IOD43_RS27885 () | 84137..84682 | + | 546 | WP_000059817.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IOD43_RS27890 () | 84612..84986 | + | 375 | WP_071776752.1 | P-type conjugative transfer protein TrbJ | - |
| IOD43_RS27895 () | 84940..85332 | + | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| IOD43_RS27900 () | 85319..86692 | + | 1374 | WP_000944325.1 | conjugal transfer protein TraH | - |
| IOD43_RS27905 () | 86689..89505 | + | 2817 | WP_015059018.1 | conjugal transfer mating pair stabilization protein TraG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|