MGE detailed information
MGE type: Mobilizable plasmid MGE length: 89721 bp
Accession: NZ_CP063502 Location: 1..89721 Organism: Escherichia coli strain EH10-18-47 Replicon: plasmid pEH10-18-47_3
Accession: NZ_CP063502 Location: 1..89721 Organism: Escherichia coli strain EH10-18-47 Replicon: plasmid pEH10-18-47_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQS20_RS22430 () | 1104..1902 | + | 799 | Protein_1 | trhR | - |
| IQS20_RS22435 () | 1905..2416 | + | 512 | Protein_2 | hypothetical protein | - |
| IQS20_RS22440 () | 3030..3311 | + | 282 | Protein_3 | thioredoxin family protein | - |
| IQS20_RS22445 () | 3366..4063 | + | 698 | Protein_4 | IS1 family transposase | - |
| IQS20_RS22450 () | 4079..4852 | + | 774 | Protein_5 | conjugal transfer protein TraF | - |
| IQS20_RS22455 () | 4842..5264 | + | 423 | Protein_6 | IncHI-type conjugal transfer protein TrhH | - |
| IQS20_RS22460 () | 5279..6163 | - | 885 | Protein_7 | IS3 family transposase ISEc52 | Transposase |
| IQS20_RS22465 () | 6211..6429 | + | 219 | Protein_8 | IS91 family transposase | - |
| IQS20_RS22470 () | 6498..7469 | - | 972 | WP_170386723.1 | IS30 family transposase ISApl1 | Transposase |
| IQS20_RS22475 () | 8085..11618 | + | 3534 | WP_094317721.1 | Outer membrane protein IcsA autotransporter | VF |
| IQS20_RS22480 () | 11793..11998 | - | 206 | Protein_11 | transposase | - |
| IQS20_RS22485 () | 11988..12188 | + | 201 | WP_032214362.1 | DUF839 domain-containing protein | - |
| IQS20_RS22490 () | 12478..12765 | - | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IQS20_RS22495 () | 12762..13013 | - | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| IQS20_RS22500 () | 13626..13865 | + | 240 | Protein_15 | hypothetical protein | - |
| IQS20_RS22505 () | 14094..15494 | + | 1401 | WP_032185977.1 | cytochrome ubiquinol oxidase subunit I | - |
| IQS20_RS22510 () | 15494..16504 | + | 1011 | WP_000510495.1 | cytochrome d ubiquinol oxidase subunit II | - |
| IQS20_RS22515 () | 16504..16632 | + | 129 | WP_001164804.1 | DUF2474 domain-containing protein | - |
| IQS20_RS22520 () | 16737..17150 | - | 414 | Protein_19 | collagenase-like protease | - |
| IQS20_RS22525 () | 17422..18153 | + | 732 | WP_077760276.1 | hypothetical protein | - |
| IQS20_RS22530 () | 18174..19511 | + | 1338 | WP_077478206.1 | darB domain protein | - |
| IQS20_RS22535 () | 19545..19985 | + | 441 | WP_000224043.1 | hypothetical protein | - |
| IQS20_RS22540 () | 19982..20230 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| IQS20_RS22545 () | 20313..21323 | + | 1011 | WP_032219104.1 | DUF2971 domain-containing protein | - |
| IQS20_RS22550 () | 21421..22062 | - | 642 | WP_016246529.1 | hypothetical protein | - |
| IQS20_RS22555 () | 22251..22511 | - | 261 | WP_001514449.1 | recombination enhancement function protein | - |
| IQS20_RS22560 () | 22541..24850 | - | 2310 | Protein_27 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| IQS20_RS22565 () | 25039..26193 | - | 1155 | Protein_28 | Methyl-accepting chemotaxis protein McpQ | VF |
| IQS20_RS22570 () | 26257..26961 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IQS20_RS22575 () | 27021..28034 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| IQS20_RS22580 () | 28190..28663 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| IQS20_RS22585 () | 28733..29437 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IQS20_RS22590 () | 29685..30500 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| IQS20_RS22595 () | 30561..31364 | + | 804 | WP_001082320.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| IQS20_RS22600 () | 31364..32200 | + | 837 | WP_000480972.1 | hypothetical protein | ARG |
| IQS20_RS22605 () | 32431..33291 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| IQS20_RS22610 () | 33487..34191 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IQS20_RS22615 () | 34182..37118 | + | 2937 | WP_137548296.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| IQS20_RS22620 () | 37152..37868 | + | 717 | Protein_39 | Tn3 family transposase | - |
| IQS20_RS22625 () | 37926..38168 | + | 243 | WP_000844627.1 | transposase | - |
| IQS20_RS22630 () | 38200..38850 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| IQS20_RS22635 () | 38956..40155 | + | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| IQS20_RS22640 () | 40122..40310 | - | 189 | Protein_43 | IS91 family transposase | - |
| IQS20_RS22645 () | 40422..40727 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| IQS20_RS22650 () | 40755..41969 | - | 1215 | WP_065311137.1 | Bicyclomycin resistance protein | ARG |
| IQS20_RS22655 () | 42186..42632 | - | 447 | Protein_46 | DUF3363 domain-containing protein | - |
| IQS20_RS22660 () | 43101..44594 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| IQS20_RS22665 () | 44805..45029 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| IQS20_RS22670 () | 45026..45763 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| IQS20_RS22675 () | 46249..46389 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| IQS20_RS22680 () | 46395..47099 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IQS20_RS22685 () | 47166..47782 | - | 617 | Protein_52 | transposase | - |
| IQS20_RS22690 () | 48177..48833 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| IQS20_RS22695 () | 49152..49580 | - | 429 | Protein_54 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| IQS20_RS22700 () | 49613..51004 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| IQS20_RS22705 () | 51041..51613 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| IQS20_RS22710 () | 51750..52340 | - | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| IQS20_RS22715 () | 52434..53117 | - | 684 | Protein_58 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| IQS20_RS22720 () | 53285..53689 | + | 405 | Protein_59 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| IQS20_RS22725 () | 53817..54950 | - | 1134 | WP_001089729.1 | permease | - |
| IQS20_RS22730 () | 55056..55379 | + | 324 | WP_001175593.1 | helix-turn-helix domain-containing protein | - |
| IQS20_RS22735 () | 55481..56178 | + | 698 | Protein_62 | IS1 family transposase | - |
| IQS20_RS22740 () | 56500..56799 | - | 300 | WP_112918713.1 | recombinase | - |
| IQS20_RS22745 () | 57047..57358 | - | 312 | WP_032214403.1 | hypothetical protein | - |
| IQS20_RS22750 () | 57409..58440 | - | 1032 | WP_000067532.1 | site-specific integrase | - |
| IQS20_RS22755 () | 58448..58669 | - | 222 | WP_032214402.1 | hypothetical protein | - |
| IQS20_RS22760 () | 59266..59475 | + | 210 | WP_112918712.1 | c1 repressor inactivator | - |
| IQS20_RS22765 () | 59586..60437 | + | 852 | WP_000611656.1 | hypothetical protein | - |
| IQS20_RS22770 () | 60462..61946 | - | 1485 | WP_000124159.1 | hypothetical protein | - |
| IQS20_RS22775 () | 61946..63139 | - | 1194 | WP_032214401.1 | hypothetical protein | - |
| IQS20_RS22780 () | 63225..63677 | - | 453 | WP_001326849.1 | late promoter-activating protein | - |
| IQS20_RS22785 () | 63766..64809 | - | 1044 | WP_112918711.1 | DUF968 domain-containing protein | - |
| IQS20_RS22790 () | 64837..65016 | - | 180 | WP_000113018.1 | hypothetical protein | - |
| IQS20_RS22795 () | 65021..65401 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| IQS20_RS22800 () | 65401..65622 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| IQS20_RS22805 () | 65695..66084 | - | 390 | WP_000506724.1 | DNA repair protein | - |
| IQS20_RS22810 () | 66259..66591 | + | 333 | Protein_77 | DNA-binding protein | - |
| IQS20_RS22815 () | 66625..66843 | + | 219 | WP_094318256.1 | hypothetical protein | - |
| IQS20_RS22820 () | 66844..67200 | + | 357 | WP_001062545.1 | hypothetical protein | - |
| IQS20_RS22825 () | 68276..68458 | - | 183 | WP_001548895.1 | hypothetical protein | - |
| IQS20_RS22830 () | 68634..69107 | - | 474 | WP_077632598.1 | hypothetical protein | - |
| IQS20_RS22835 () | 69264..69812 | - | 549 | Protein_82 | hypothetical protein | - |
| IQS20_RS22840 () | 70007..70513 | - | 507 | WP_000021754.1 | hypothetical protein | - |
| IQS20_RS22845 () | 70586..71392 | - | 807 | Protein_84 | hypothetical protein | - |
| IQS20_RS22850 () | 71532..72454 | + | 923 | Protein_85 | IS30 family transposase ISApl1 | Transposase |
| IQS20_RS22855 () | 73142..73839 | + | 698 | Protein_86 | IS1 family transposase | - |
| IQS20_RS22860 () | 73922..74890 | + | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| IQS20_RS22865 () | 75068..75421 | + | 354 | WP_089586239.1 | hypothetical protein | - |
| IQS20_RS22870 () | 75593..75883 | + | 291 | WP_001642860.1 | hypothetical protein | - |
| IQS20_RS22875 () | 76061..76453 | + | 393 | WP_112918729.1 | hypothetical protein | - |
| IQS20_RS22880 () | 76789..77673 | + | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| IQS20_RS22885 () | 77966..78775 | + | 810 | WP_032247076.1 | GIY-YIG nuclease family protein | - |
| IQS20_RS22890 () | 78944..80140 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| IQS20_RS22895 () | 80157..81158 | + | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| IQS20_RS22900 () | 81384..83090 | + | 1707 | WP_094318215.1 | hypothetical protein | - |
| IQS20_RS22905 () | 83150..84739 | + | 1590 | WP_112918728.1 | hypothetical protein | - |
| IQS20_RS22910 () | 84749..85564 | + | 816 | WP_112918727.1 | hypothetical protein | - |
| IQS20_RS22915 () | 85609..85989 | + | 381 | WP_113403825.1 | DUF1643 domain-containing protein | - |
| IQS20_RS22920 () | 86145..87161 | + | 1017 | WP_047668699.1 | hypothetical protein | - |
| IQS20_RS22925 () | 87346..88043 | + | 698 | Protein_100 | IS1 family transposase | - |
| IQS20_RS22930 () | 88055..88852 | - | 798 | Protein_101 | hypothetical protein | Relaxase |
| IQS20_RS22935 () | 88863..89585 | - | 723 | WP_000133023.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|