MGE detailed information
MGE type: Prophage MGE length: 77298 bp
Accession: NZ_CP063499 Location: 2402361..2479658 Organism: Escherichia coli strain EH10-18-47 Replicon: chromosome
Accession: NZ_CP063499 Location: 2402361..2479658 Organism: Escherichia coli strain EH10-18-47 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQS20_RS11510 () | 2398531..2399487 | + | 957 | WP_000121346.1 | molybdenum cofactor insertion chaperone PaoD | - |
| IQS20_RS11515 () | 2399538..2399876 | + | 339 | Protein_2255 | LysR family transcriptional regulator | - |
| IQS20_RS11520 () | 2400498..2401841 | - | 1344 | WP_072805161.1 | hypothetical protein | - |
| IQS20_RS11525 () | 2402361..2402915 | - | 555 | WP_072805159.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| IQS20_RS11530 () | 2402945..2403439 | + | 495 | WP_205590615.1 | tail fiber protein | - |
| IQS20_RS11535 () | 2403439..2404041 | + | 603 | WP_205590605.1 | tail fiber assembly protein | - |
| IQS20_RS11540 () | 2404013..2404456 | - | 444 | WP_106719967.1 | tail fiber assembly protein | - |
| IQS20_RS11545 () | 2404795..2405106 | - | 312 | Protein_2261 | hypothetical protein | - |
| IQS20_RS11550 () | 2405110..2405694 | - | 585 | WP_063073499.1 | YmfQ family protein | - |
| IQS20_RS11555 () | 2405685..2406743 | - | 1059 | WP_001583215.1 | baseplate J/gp47 family protein | - |
| IQS20_RS11560 () | 2406730..2407155 | - | 426 | WP_122999010.1 | phage GP46 family protein | - |
| IQS20_RS11565 () | 2407155..2407703 | - | 549 | WP_001259088.1 | phage baseplate assembly protein V | - |
| IQS20_RS11570 () | 2407703..2408782 | - | 1080 | WP_096959915.1 | baseplate protein | - |
| IQS20_RS11575 () | 2408779..2410107 | - | 1329 | WP_064186554.1 | DNA circularization N-terminal domain-containing protein | - |
| IQS20_RS11580 () | 2410169..2410699 | - | 531 | WP_203161102.1 | hypothetical protein | - |
| IQS20_RS11585 () | 2410791..2412623 | - | 1833 | WP_112874832.1 | phage tail tape measure protein | - |
| IQS20_RS11590 () | 2412765..2413034 | - | 270 | WP_000661054.1 | phage tail assembly protein | - |
| IQS20_RS11595 () | 2413034..2413390 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| IQS20_RS11600 () | 2413390..2414886 | - | 1497 | WP_052938937.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| IQS20_RS11605 () | 2414870..2415040 | - | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| IQS20_RS11610 () | 2415049..2415609 | - | 561 | WP_203161103.1 | hypothetical protein | - |
| IQS20_RS11615 () | 2415606..2416112 | - | 507 | WP_203161104.1 | hypothetical protein | - |
| IQS20_RS11620 () | 2416087..2416497 | - | 411 | WP_000702389.1 | phage head closure protein | - |
| IQS20_RS11625 () | 2416494..2416817 | - | 324 | WP_000927715.1 | head-tail connector protein | - |
| IQS20_RS11630 () | 2416820..2417020 | - | 201 | WP_000601363.1 | hypothetical protein | - |
| IQS20_RS11635 () | 2417070..2418275 | - | 1206 | WP_000257507.1 | phage major capsid protein | - |
| IQS20_RS11640 () | 2418290..2418940 | - | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| IQS20_RS11645 () | 2418918..2420159 | - | 1242 | WP_000466255.1 | phage portal protein | - |
| IQS20_RS11650 () | 2420159..2420341 | - | 183 | WP_000605606.1 | hypothetical protein | - |
| IQS20_RS11655 () | 2420353..2421849 | - | 1497 | WP_072011717.1 | terminase large subunit | - |
| IQS20_RS11660 () | 2422100..2422585 | - | 486 | WP_000929174.1 | phage terminase small subunit P27 family | - |
| IQS20_RS11665 () | 2422711..2423061 | - | 351 | WP_089578280.1 | HNH endonuclease | - |
| IQS20_RS11670 () | 2423127..2423330 | - | 204 | WP_000699783.1 | hypothetical protein | - |
| IQS20_RS11675 () | 2423448..2423822 | - | 375 | WP_029396337.1 | hypothetical protein | - |
| IQS20_RS11680 () | 2423861..2424304 | - | 444 | WP_089578276.1 | lysis protein | - |
| IQS20_RS11685 () | 2424301..2424777 | - | 477 | WP_029396339.1 | glycoside hydrolase family protein | - |
| IQS20_RS11690 () | 2424764..2425069 | - | 306 | WP_000544528.1 | phage holin family protein | - |
| IQS20_RS11695 () | 2425391..2426080 | - | 690 | WP_029396340.1 | antitermination protein | - |
| IQS20_RS11700 () | 2426077..2426217 | - | 141 | WP_089578277.1 | YlcG family protein | - |
| IQS20_RS11705 () | 2426214..2426576 | - | 363 | WP_001099521.1 | crossover junction endodeoxyribonuclease RusA | - |
| IQS20_RS11710 () | 2426573..2426863 | - | 291 | WP_001516219.1 | DUF1364 domain-containing protein | - |
| IQS20_RS11715 () | 2426856..2427026 | - | 171 | WP_000224907.1 | hypothetical protein | - |
| IQS20_RS11720 () | 2427026..2427481 | - | 456 | WP_039022182.1 | DNA base-flipping protein YbcN | - |
| IQS20_RS11725 () | 2427478..2427579 | - | 102 | WP_072157016.1 | hypothetical protein | - |
| IQS20_RS11730 () | 2427666..2428478 | - | 813 | WP_052246034.1 | toll/interleukin-1 receptor domain-containing protein | - |
| IQS20_RS11735 () | 2428571..2428864 | - | 294 | WP_089568815.1 | protein ren | - |
| IQS20_RS11740 () | 2428861..2429562 | - | 702 | WP_089578278.1 | Replication protein P | - |
| IQS20_RS11745 () | 2429559..2430578 | - | 1020 | WP_001446384.1 | replication protein | - |
| IQS20_RS11750 () | 2430575..2431114 | - | 540 | WP_001182890.1 | toxin YdaT domain-containing protein | - |
| IQS20_RS11755 () | 2431145..2431372 | - | 228 | WP_000184665.1 | helix-turn-helix domain-containing protein | - |
| IQS20_RS11760 () | 2431483..2432175 | + | 693 | WP_001295669.1 | helix-turn-helix transcriptional regulator | - |
| IQS20_RS11765 () | 2432325..2432504 | + | 180 | WP_071788701.1 | hypothetical protein | - |
| IQS20_RS11770 () | 2432467..2433327 | + | 861 | WP_029396293.1 | hypothetical protein | - |
| IQS20_RS11775 () | 2433832..2434038 | + | 207 | WP_000233576.1 | phage encoded cell division inhibitor protein | - |
| IQS20_RS11780 () | 2434114..2434410 | + | 297 | WP_001361467.1 | host-nuclease inhibitor protein Gam | - |
| IQS20_RS11785 () | 2434416..2435201 | + | 786 | WP_000100844.1 | phage recombination protein Bet | - |
| IQS20_RS11790 () | 2435198..2435878 | + | 681 | WP_016261925.1 | YqaJ viral recombinase family protein | - |
| IQS20_RS11795 () | 2435875..2436057 | + | 183 | WP_203079496.1 | DUF1317 domain-containing protein | - |
| IQS20_RS11800 () | 2436030..2436221 | + | 192 | WP_000548531.1 | DUF1382 family protein | - |
| IQS20_RS11805 () | 2436298..2436513 | + | 216 | WP_181055398.1 | cell division protein ZapA | - |
| IQS20_RS11810 () | 2436612..2436830 | + | 219 | WP_000763390.1 | TraR/DksA family transcriptional regulator | - |
| IQS20_RS11815 () | 2436878..2437156 | + | 279 | WP_000488407.1 | DUF4222 domain-containing protein | - |
| IQS20_RS11820 () | 2437355..2438518 | + | 1164 | WP_001446382.1 | hypothetical protein ; Integrase | Integrase |
| IQS20_RS11830 () | 2438723..2439976 | - | 1254 | WP_000893279.1 | glutamate-5-semialdehyde dehydrogenase | - |
| IQS20_RS11835 () | 2439988..2441091 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| IQS20_RS11840 () | 2441379..2442434 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| IQS20_RS11845 () | 2442473..2442874 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| IQS20_RS11850 () | 2442932..2444176 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 2443592..2443672 | - | 81 | NuclAT_9 | - | - |
| - () | 2443592..2443672 | - | 81 | NuclAT_9 | - | - |
| - () | 2443592..2443672 | - | 81 | NuclAT_9 | - | - |
| - () | 2443592..2443672 | - | 81 | NuclAT_9 | - | - |
| IQS20_RS11855 () | 2444268..2444726 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| IQS20_RS11860 () | 2444987..2446444 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| IQS20_RS11865 () | 2446501..2447022 | - | 522 | Protein_2324 | peptide chain release factor H | - |
| IQS20_RS11870 () | 2447021..2447224 | - | 204 | Protein_2325 | RNA ligase RtcB family protein | - |
| IQS20_RS11875 () | 2447470..2447922 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| IQS20_RS11880 () | 2447932..2448330 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| IQS20_RS11885 () | 2448333..2448626 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| IQS20_RS11890 () | 2448678..2449733 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| IQS20_RS11895 () | 2449804..2450589 | - | 786 | WP_000207587.1 | hypothetical protein | VF |
| IQS20_RS11900 () | 2450561..2452273 | + | 1713 | Protein_2331 | hypothetical protein | VF |
| IQS20_RS11905 () | 2452699..2453196 | - | 498 | WP_033802985.1 | REP-associated tyrosine transposase RayT | - |
| IQS20_RS11910 () | 2453372..2454121 | - | 750 | WP_033802986.1 | hypothetical protein | VF |
| IQS20_RS11915 () | 2454331..2454591 | + | 261 | WP_033802987.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| IQS20_RS11920 () | 2454594..2454872 | + | 279 | WP_033802988.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| IQS20_RS11925 () | 2455028..2455768 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| IQS20_RS11930 () | 2455739..2456506 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| IQS20_RS11935 () | 2456712..2457290 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| IQS20_RS11940 () | 2457530..2459974 | + | 2445 | WP_000973081.1 | hypothetical protein | VF |
| IQS20_RS11945 () | 2460017..2460463 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| IQS20_RS11950 () | 2460644..2461414 | + | 771 | WP_203161105.1 | amidohydrolase | - |
| IQS20_RS11955 () | 2461527..2462224 | + | 698 | Protein_2342 | IS1 family transposase IS1R | Transposase |
| IQS20_RS11960 () | 2462303..2462665 | + | 363 | WP_053887580.1 | hypothetical protein | - |
| IQS20_RS11975 () | 2464250..2464981 | - | 732 | WP_001366128.1 | DNA polymerase III subunit epsilon | - |
| IQS20_RS11980 () | 2465046..2465513 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| IQS20_RS11985 () | 2465510..2466232 | - | 723 | WP_001307587.1 | class I SAM-dependent methyltransferase | - |
| IQS20_RS11990 () | 2466266..2467021 | + | 756 | WP_001052721.1 | hydroxyacylglutathione hydrolase | - |
| IQS20_RS11995 () | 2467093..2468451 | + | 1359 | WP_033803132.1 | murein transglycosylase D | - |
| IQS20_RS12000 () | 2468499..2469269 | - | 771 | WP_203161153.1 | class I SAM-dependent methyltransferase | - |
| IQS20_RS12005 () | 2469347..2470147 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| IQS20_RS12010 () | 2470388..2471302 | + | 915 | WP_001612387.1 | HTH-type transcriptional regulator ArgP | VF |
| IQS20_RS12015 () | 2471299..2472102 | - | 804 | WP_000997059.1 | 2,5-didehydrogluconate reductase DkgB | - |
| IQS20_RS12050 () | 2477864..2478439 | - | 576 | WP_001140187.1 | Histidine biosynthesis bifunctional protein HisB | VF |
| IQS20_RS12055 () | 2478627..2479658 | + | 1032 | WP_000593983.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| IQS20_RS12060 () | 2479651..2480304 | + | 654 | WP_001294600.1 | methionine ABC transporter permease MetI | - |
| IQS20_RS12065 () | 2480344..2481159 | + | 816 | WP_000874224.1 | methionine ABC transporter substrate-binding lipoprotein MetQ | - |
| IQS20_RS12070 () | 2481277..2481681 | + | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| IQS20_RS12075 () | 2481678..2482385 | + | 708 | WP_000094004.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| IQS20_RS12080 () | 2482496..2484214 | + | 1719 | WP_033803075.1 | proline--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|