MGE detailed information
MGE type: Conjugative plasmid MGE length: 91066 bp
Accession: NZ_CP063481 Location: 1..91066 Organism: Escherichia coli strain EM06-18-14 Replicon: plasmid pEM06-18-14_2
Accession: NZ_CP063481 Location: 1..91066 Organism: Escherichia coli strain EM06-18-14 Replicon: plasmid pEM06-18-14_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQS22_RS23655 () | 368..1909 | - | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| IQS22_RS23660 () | 2314..3153 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| IQS22_RS23665 () | 3147..3494 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| IQS22_RS23670 () | 3658..3777 | - | 120 | Protein_4 | ANT(3'') family aminoglycoside nucleotidyltransferase | - |
| IQS22_RS23675 () | 3786..4994 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| IQS22_RS23680 () | 5104..5787 | - | 684 | Protein_6 | Streptomycin 3''-adenylyltransferase | ARG |
| IQS22_RS23685 () | 5793..6083 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| IQS22_RS23690 () | 6195..6692 | - | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| IQS22_RS23695 () | 6837..7703 | + | 867 | Protein_9 | IS91 family transposase ISAzo26 | Transposase |
| IQS22_RS23700 () | 7758..8462 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IQS22_RS23705 () | 8526..11303 | + | 2778 | Protein_11 | Tn3 family transposase TnpA_Tn3 | Transposase |
| IQS22_RS23710 () | 11470..12060 | + | 591 | WP_000194568.1 | hypothetical protein | - |
| IQS22_RS23715 () | 12325..13881 | + | 1557 | WP_001579759.1 | AAA family ATPase | - |
| IQS22_RS23720 () | 14076..14693 | + | 618 | WP_000521604.1 | hypothetical protein | - |
| IQS22_RS23725 () | 14752..15744 | - | 993 | WP_001579760.1 | hypothetical protein | - |
| IQS22_RS23730 () | 16658..17515 | - | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| IQS22_RS23735 () | 17508..17582 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| IQS22_RS23740 () | 17827..18075 | - | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| IQS22_RS23745 () | 18359..18508 | - | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 18553..18612 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 18553..18612 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 18553..18612 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 18553..18612 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| IQS22_RS23750 () | 18813..19043 | - | 231 | WP_001736714.1 | hypothetical protein | - |
| IQS22_RS23755 () | 19207..19806 | - | 600 | WP_032083981.1 | hypothetical protein | - |
| IQS22_RS23760 () | 20192..20392 | - | 201 | WP_015059022.1 | hypothetical protein | - |
| IQS22_RS23765 () | 20524..21084 | - | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| IQS22_RS23770 () | 21139..21885 | - | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| IQS22_RS23775 () | 21905..27175 | - | 5271 | WP_015059021.1 | Multifunctional conjugation protein TraI | Relaxase |
| IQS22_RS23780 () | 27175..29382 | - | 2208 | WP_021573169.1 | type IV conjugative transfer system coupling protein TraD | - |
| IQS22_RS23785 () | 29433..30170 | - | 738 | WP_015059020.1 | hypothetical protein | - |
| IQS22_RS23790 () | 30373..31104 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| IQS22_RS23795 () | 31129..31650 | - | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| IQS22_RS23800 () | 31683..34499 | - | 2817 | WP_015059018.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IQS22_RS23805 () | 34496..35869 | - | 1374 | WP_000944325.1 | conjugal transfer protein TraH | - |
| IQS22_RS23810 () | 35856..36248 | - | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| IQS22_RS23815 () | 36202..36576 | - | 375 | WP_071776752.1 | P-type conjugative transfer protein TrbJ | - |
| IQS22_RS23820 () | 36506..37051 | - | 546 | WP_000059817.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IQS22_RS23825 () | 37038..37319 | - | 282 | WP_000549793.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IQS22_RS23830 () | 37435..38178 | - | 744 | WP_015059017.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IQS22_RS23835 () | 38171..38428 | - | 258 | WP_053913405.1 | conjugal transfer protein TrbE | - |
| IQS22_RS23840 () | 38455..40305 | - | 1851 | WP_015059015.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IQS22_RS23845 () | 40302..40724 | - | 423 | WP_001229309.1 | HNH endonuclease | - |
| IQS22_RS23850 () | 40750..41121 | - | 372 | WP_000056336.1 | hypothetical protein | - |
| IQS22_RS23855 () | 41118..41756 | - | 639 | WP_000087532.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IQS22_RS23860 () | 41783..42304 | - | 522 | WP_015059014.1 | hypothetical protein | - |
| IQS22_RS23865 () | 42367..42675 | - | 309 | WP_000412447.1 | hypothetical protein | - |
| IQS22_RS23870 () | 42702..43694 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| IQS22_RS23875 () | 43691..44323 | - | 633 | WP_001203735.1 | type-F conjugative transfer system protein TraW | - |
| IQS22_RS23880 () | 44320..44706 | - | 387 | WP_015059013.1 | type-F conjugative transfer system protein TrbI | - |
| IQS22_RS23885 () | 44703..47330 | - | 2628 | WP_015059012.1 | type IV secretion system protein TraC | - |
| IQS22_RS23890 () | 47490..47711 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| IQS22_RS23895 () | 47846..48361 | - | 516 | WP_000809902.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IQS22_RS23900 () | 48358..48609 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| IQS22_RS23905 () | 48621..48851 | - | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| IQS22_RS23910 () | 48805..49395 | - | 591 | WP_000002778.1 | conjugal transfer protein TraP | - |
| IQS22_RS23915 () | 49385..50812 | - | 1428 | WP_032297072.1 | conjugal transfer protein TraB | - |
| IQS22_RS23920 () | 50812..51516 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| IQS22_RS23925 () | 51527..52093 | - | 567 | WP_000399794.1 | type IV conjugative transfer system protein TraE | - |
| IQS22_RS23930 () | 52115..52426 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| IQS22_RS23935 () | 52441..52806 | - | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| IQS22_RS23940 () | 52840..53067 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| IQS22_RS23945 () | 53161..53847 | - | 687 | WP_015059009.1 | PAS domain-containing protein | - |
| IQS22_RS23950 () | 54038..54421 | - | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| IQS22_RS23955 () | 54698..55345 | + | 648 | WP_015059008.1 | hypothetical protein | VF |
| IQS22_RS23960 () | 55642..56463 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| IQS22_RS23965 () | 56574..56870 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| IQS22_RS23970 () | 57170..57547 | + | 378 | Protein_64 | hypothetical protein | - |
| IQS22_RS23975 () | 57785..57943 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 57987..58211 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 57987..58211 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 57987..58211 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 57987..58211 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| IQS22_RS23980 () | 58023..58202 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| IQS22_RS23985 () | 58223..58942 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| IQS22_RS23990 () | 58939..59373 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| IQS22_RS23995 () | 59442..61465 | - | 2024 | Protein_69 | ParB/RepB/Spo0J family partition protein | - |
| IQS22_RS24000 () | 61526..61759 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| IQS22_RS24005 () | 61817..62344 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| IQS22_RS24010 () | 62646..63101 | + | 456 | WP_001424978.1 | hypothetical protein | - |
| IQS22_RS24015 () | 63187..63750 | - | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| IQS22_RS24020 () | 63797..65158 | - | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| IQS22_RS24025 () | 65210..65440 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| IQS22_RS24030 () | 66840..68507 | + | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| IQS22_RS24035 () | 68821..69012 | - | 192 | WP_001027493.1 | hypothetical protein | - |
| IQS22_RS24040 () | 69009..69431 | - | 423 | WP_000271762.1 | DUF1380 family protein | - |
| IQS22_RS24045 () | 69478..69780 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| IQS22_RS24050 () | 70263..71033 | - | 771 | WP_001006207.1 | hypothetical protein | - |
| IQS22_RS24055 () | 71078..71512 | - | 435 | WP_000274504.1 | DUF1380 family protein | - |
| IQS22_RS24060 () | 71525..71746 | - | 222 | WP_001104902.1 | hypothetical protein | - |
| IQS22_RS24065 () | 71747..72430 | - | 684 | WP_000085889.1 | DNA methylase | - |
| IQS22_RS24070 () | 72507..72815 | - | 309 | Protein_84 | hypothetical protein | - |
| IQS22_RS24075 () | 72947..73909 | + | 963 | WP_000959875.1 | plasmid segregation protein ParM | - |
| IQS22_RS24080 () | 73912..74262 | + | 351 | WP_001430247.1 | plasmid partitioning/stability family protein | - |
| IQS22_RS24085 () | 74371..74833 | + | 463 | Protein_87 | hypothetical protein | - |
| IQS22_RS24090 () | 75058..76059 | - | 1002 | WP_000138753.1 | DUF4238 domain-containing protein | - |
| IQS22_RS24095 () | 76362..79037 | + | 2676 | WP_015059139.1 | hypothetical protein | - |
| IQS22_RS24100 () | 79383..79552 | - | 170 | Protein_90 | resolvase | - |
| IQS22_RS24105 () | 79548..80432 | - | 885 | WP_001345827.1 | hypothetical protein | - |
| IQS22_RS24110 () | 80501..82015 | - | 1515 | Protein_92 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| IQS22_RS24115 () | 82081..82785 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IQS22_RS24120 () | 82819..83073 | - | 255 | WP_138642492.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| IQS22_RS24125 () | 83237..83794 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| IQS22_RS24130 () | 83977..84837 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| IQS22_RS24135 () | 85007..85762 | + | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| IQS22_RS24140 () | 85843..86391 | - | 549 | WP_014342204.1 | cation:proton antiporter | - |
| IQS22_RS24145 () | 86454..86804 | + | 351 | Protein_99 | 60 kDa chaperonin | VF |
| IQS22_RS24150 () | 86998..87702 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IQS22_RS24155 () | 87867..88160 | + | 294 | Protein_101 | IS30 family transposase | - |
| IQS22_RS24160 () | 88261..89073 | + | 813 | WP_023408309.1 | Metallo-beta-lactamase type 2 | ARG |
| IQS22_RS24165 () | 89077..89442 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| IQS22_RS24170 () | 89447..90085 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|