MGE detailed information
MGE type: Conjugative plasmid MGE length: 94799 bp
Accession: NZ_CP063464 Location: 1..94799 Organism: Escherichia coli strain EM22-18-53 Replicon: plasmid pEM22-18-53_5
Accession: NZ_CP063464 Location: 1..94799 Organism: Escherichia coli strain EM22-18-53 Replicon: plasmid pEM22-18-53_5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQS26_RS24060 () | 1307..1561 | + | 255 | WP_171904539.1 | prepilin | - |
| IQS26_RS24065 () | 1558..1806 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| IQS26_RS24070 () | 1855..1980 | - | 126 | Protein_3 | prepilin, shufflon protein A | - |
| IQS26_RS24075 () | 1964..3118 | + | 1155 | WP_001139957.1 | integrase | - |
| IQS26_RS24080 () | 3269..4093 | + | 825 | WP_001238939.1 | hypothetical protein | - |
| IQS26_RS24085 () | 4178..5380 | + | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| IQS26_RS24090 () | 5440..6024 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| IQS26_RS24095 () | 6150..7388 | + | 1239 | Protein_8 | IncI1-type conjugal transfer protein TraU | - |
| IQS26_RS24100 () | 7388..8002 | + | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| IQS26_RS24105 () | 7969..9171 | + | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| IQS26_RS24110 () | 9200..9784 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| IQS26_RS24115 () | 9881..11449 | + | 1569 | Protein_12 | IncI1-type conjugal transfer membrane protein TraY | - |
| IQS26_RS24120 () | 11465..12161 | - | 697 | Protein_13 | IS1 family transposase | - |
| IQS26_RS24125 () | 12217..12825 | + | 609 | Protein_14 | IncI1-type conjugal transfer membrane protein TraY | - |
| IQS26_RS24130 () | 12901..13515 | + | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| IQS26_RS24135 () | 13613..13822 | + | 210 | WP_001140545.1 | hemolysin expression modulator Hha | - |
| IQS26_RS24140 () | 14031..14207 | + | 177 | WP_001054904.1 | hypothetical protein | - |
| IQS26_RS24145 () | 14272..14568 | - | 297 | WP_000115013.1 | hypothetical protein | - |
| IQS26_RS24150 () | 14868..15119 | + | 252 | WP_001535703.1 | hypothetical protein | - |
| IQS26_RS24155 () | 15191..15343 | - | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| - () | 15398..15455 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 15398..15455 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 15398..15455 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 15398..15455 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| IQS26_RS24160 () | 15635..16843 | + | 1209 | WP_001535704.1 | IncI1-type conjugal transfer protein TrbA | - |
| IQS26_RS24165 () | 16862..17932 | + | 1071 | WP_001535705.1 | IncI1-type conjugal transfer protein TrbB | - |
| IQS26_RS24170 () | 17925..20216 | + | 2292 | WP_001289272.1 | hypothetical protein | - |
| IQS26_RS24175 () | 20289..21107 | - | 819 | WP_000106196.1 | DUF2971 domain-containing protein | - |
| IQS26_RS24180 () | 21230..23932 | - | 2703 | WP_001493820.1 | Protein TraI | Relaxase |
| IQS26_RS24185 () | 23943..24275 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| IQS26_RS24190 () | 24509..24844 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| IQS26_RS24195 () | 24930..25778 | - | 849 | WP_203079846.1 | DUF4942 domain-containing protein | - |
| IQS26_RS24200 () | 26127..26324 | + | 198 | WP_024129998.1 | hypothetical protein | - |
| IQS26_RS24205 () | 26358..26609 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| IQS26_RS24210 () | 26640..26885 | - | 246 | WP_001260884.1 | hypothetical protein | - |
| IQS26_RS24215 () | 26885..27823 | - | 939 | WP_000038336.1 | Recombination-promoting nuclease RpnA | VF |
| IQS26_RS24220 () | 27888..28154 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| IQS26_RS24225 () | 28246..28680 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| IQS26_RS24230 () | 29409..29909 | - | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| IQS26_RS24235 () | 30372..30689 | - | 318 | WP_113842125.1 | hypothetical protein | - |
| IQS26_RS24240 () | 31386..31778 | - | 393 | WP_000272884.1 | plasmid partitioning/stability family protein | - |
| IQS26_RS24245 () | 31782..32756 | - | 975 | WP_001217836.1 | hypothetical protein | - |
| IQS26_RS24250 () | 32995..33369 | - | 375 | WP_000752652.1 | hypothetical protein | - |
| IQS26_RS24255 () | 33369..34001 | - | 633 | WP_000312331.1 | ParA family protein | - |
| IQS26_RS24260 () | 34585..35370 | - | 786 | WP_001164192.1 | site-specific integrase | - |
| IQS26_RS24265 () | 35372..35785 | - | 414 | WP_000465034.1 | hypothetical protein | - |
| IQS26_RS24270 () | 36354..36605 | + | 252 | WP_205561674.1 | hypothetical protein | - |
| IQS26_RS24275 () | 36612..37202 | + | 591 | WP_000194561.1 | hypothetical protein | - |
| IQS26_RS24280 () | 37220..37567 | - | 348 | WP_000142424.1 | hypothetical protein | - |
| IQS26_RS24285 () | 37686..38033 | + | 348 | WP_000762580.1 | hypothetical protein | - |
| IQS26_RS24290 () | 38051..39931 | - | 1881 | WP_001283356.1 | colicin | - |
| IQS26_RS24295 () | 40210..41556 | - | 1347 | WP_203079848.1 | hypothetical protein | - |
| IQS26_RS24300 () | 41910..42512 | + | 603 | WP_000517689.1 | hypothetical protein | - |
| IQS26_RS24305 () | 42568..43062 | + | 495 | WP_001442119.1 | hypothetical protein | - |
| IQS26_RS24310 () | 43062..43328 | + | 267 | WP_000627831.1 | hypothetical protein | - |
| IQS26_RS24315 () | 43805..44221 | - | 417 | WP_031610367.1 | hypothetical protein | - |
| IQS26_RS24320 () | 44230..46908 | - | 2679 | Protein_53 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| IQS26_RS24325 () | 46951..47655 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IQS26_RS24330 () | 47808..48668 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| IQS26_RS24335 () | 48815..49096 | + | 282 | Protein_56 | transposase zinc-binding domain-containing protein | - |
| IQS26_RS24340 () | 49266..49971 | + | 706 | Protein_57 | IS6-like element IS26 family transposase | - |
| IQS26_RS24345 () | 50021..50740 | + | 720 | Protein_58 | AAA family ATPase | - |
| IQS26_RS24350 () | 50727..51697 | + | 971 | Protein_59 | replication protein C | - |
| IQS26_RS24355 () | 51885..52700 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| IQS26_RS24360 () | 52761..53564 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| IQS26_RS24365 () | 53564..54304 | + | 741 | Protein_62 | hypothetical protein | ARG |
| IQS26_RS24370 () | 54373..55491 | - | 1119 | WP_000845049.1 | IS91 family transposase ISAzo26 | Transposase |
| IQS26_RS24375 () | 55648..56121 | + | 474 | WP_000777555.1 | Dihydrofolate reductase type 1 | ARG |
| IQS26_RS24380 () | 56214..57005 | + | 792 | WP_001206317.1 | Streptomycin 3''-adenylyltransferase | ARG |
| IQS26_RS24385 () | 57169..57516 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| IQS26_RS24390 () | 57510..58349 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| IQS26_RS24395 () | 58477..58977 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| IQS26_RS24400 () | 59153..59935 | - | 783 | WP_001163403.1 | IS21 family transposase IS1326 | Transposase |
| IQS26_RS24405 () | 59925..61448 | - | 1524 | WP_001324342.1 | IS21 family transposase IS1326 | Transposase |
| IQS26_RS24410 () | 61550..62410 | - | 861 | WP_000344784.1 | TniB family NTP-binding protein | - |
| IQS26_RS24415 () | 62413..64092 | - | 1680 | WP_000179844.1 | DDE-type integrase/transposase/recombinase | - |
| IQS26_RS24420 () | 64167..64835 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| IQS26_RS24425 () | 64871..65107 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| IQS26_RS24430 () | 65104..65466 | - | 363 | WP_001277457.1 | mercury resistance co-regulator MerD | - |
| IQS26_RS24435 () | 65484..67178 | - | 1695 | WP_203079857.1 | mercury(II) reductase | - |
| IQS26_RS24440 () | 67230..67652 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| IQS26_RS24445 () | 67688..67963 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| IQS26_RS24450 () | 67977..68327 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| IQS26_RS24455 () | 68399..68833 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| IQS26_RS24460 () | 69836..70078 | + | 243 | WP_000844627.1 | transposase | - |
| IQS26_RS24465 () | 70110..70760 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| IQS26_RS24470 () | 70866..72065 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| IQS26_RS24475 () | 72097..72957 | - | 861 | WP_000493383.1 | EamA family transporter | - |
| IQS26_RS24480 () | 72966..73580 | - | 615 | Protein_85 | helix-turn-helix domain-containing protein | - |
| IQS26_RS24485 () | 73542..73700 | + | 159 | WP_197711125.1 | MerR family transcriptional regulator | - |
| IQS26_RS24490 () | 73937..74785 | - | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| IQS26_RS24495 () | 74825..75106 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IQS26_RS24500 () | 75103..75372 | - | 270 | WP_000079928.1 | hypothetical protein | Antitoxin Detail |
| IQS26_RS24505 () | 75427..75585 | - | 159 | WP_000841008.1 | hypothetical protein | - |
| IQS26_RS24510 () | 76281..77312 | - | 1032 | WP_000907875.1 | replication initiation protein | - |
| IQS26_RS24515 () | 78285..78548 | + | 264 | WP_001324596.1 | ash family protein | - |
| IQS26_RS24520 () | 78466..78753 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| IQS26_RS24525 () | 79195..79728 | + | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| IQS26_RS24530 () | 79982..80665 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| IQS26_RS24535 () | 80679..81245 | + | 567 | WP_000776428.1 | hypothetical protein | - |
| IQS26_RS24540 () | 81513..81767 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| IQS26_RS24545 () | 81810..82262 | + | 453 | WP_203079856.1 | pili assembly chaperone | - |
| IQS26_RS24550 () | 82943..84171 | + | 1229 | WP_205561666.1 | IS3 family transposase IS2 | Transposase |
| IQS26_RS24555 () | 84272..85339 | + | 1068 | WP_000742600.1 | hypothetical protein | VF |
| IQS26_RS24560 () | 85339..85776 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| IQS26_RS24565 () | 85790..87472 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| IQS26_RS24570 () | 87465..88760 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| IQS26_RS24575 () | 88747..89199 | + | 453 | WP_001247336.1 | hypothetical protein | VF |
| IQS26_RS24580 () | 89210..90763 | + | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| IQS26_RS24585 () | 90776..91873 | + | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| IQS26_RS24590 () | 91891..92505 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| IQS26_RS24595 () | 92515..93075 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| IQS26_RS24600 () | 93060..93716 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|