MGE detailed information
MGE type: Conjugative plasmid MGE length: 115346 bp
Accession: NZ_CP063337 Location: 1..115346 Organism: Escherichia coli strain BS74R-D Replicon: plasmid pBS74R-D_5
Accession: NZ_CP063337 Location: 1..115346 Organism: Escherichia coli strain BS74R-D Replicon: plasmid pBS74R-D_5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IN878_RS24845 () | 613..1026 | - | 414 | WP_000465043.1 | hypothetical protein | - |
| IN878_RS24850 () | 1816..2106 | - | 291 | WP_000990619.1 | hypothetical protein | - |
| IN878_RS24855 () | 2405..3567 | - | 1163 | Protein_3 | IS3 family transposase ISEhe3 | Transposase |
| IN878_RS24860 () | 3763..7839 | + | 4077 | WP_063121986.1 | Serine protease SepA autotransporter | VF |
| IN878_RS24865 () | 8028..8795 | - | 768 | WP_001159649.1 | hypothetical protein | VF |
| IN878_RS24870 () | 8964..9578 | + | 615 | WP_000160640.1 | TIR domain-containing protein | - |
| IN878_RS24875 () | 9616..10326 | - | 711 | WP_001219114.1 | hypothetical protein | - |
| IN878_RS24880 () | 10354..10752 | - | 399 | Protein_8 | Tn3 family transposase TnpR_Tn3 | Transposase |
| IN878_RS24885 () | 10817..11521 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IN878_RS24890 () | 11822..12082 | + | 261 | Protein_10 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| IN878_RS24895 () | 12097..12447 | - | 351 | Protein_11 | IS1-like element IS1B family transposase | - |
| IN878_RS24900 () | 12479..14093 | - | 1615 | Protein_12 | IS66 family transposase ISEc23 | Transposase |
| IN878_RS24905 () | 14124..14474 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| IN878_RS24910 () | 14471..14896 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| IN878_RS24915 () | 14981..16012 | - | 1032 | Protein_15 | IS91 family transposase IS1294 | Transposase |
| IN878_RS24920 () | 16022..16210 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| IN878_RS24925 () | 16326..17441 | - | 1116 | Protein_17 | ISL3 family transposase ISCfr12 | Transposase |
| IN878_RS24930 () | 17559..18008 | - | 450 | WP_105910642.1 | hypothetical protein | - |
| IN878_RS24935 () | 18005..20452 | - | 2448 | WP_094308965.1 | F1 capsule-anchoring protein | VF |
| IN878_RS24940 () | 20468..21229 | - | 762 | WP_074425405.1 | Chaperone protein caf1M | VF |
| IN878_RS24945 () | 21370..21873 | - | 504 | WP_157769469.1 | Fimbrial protein | VF |
| IN878_RS24950 () | 22305..22913 | + | 609 | WP_074425400.1 | IS481 family transposase ISErsp1 | Transposase |
| IN878_RS24955 () | 22978..23232 | + | 255 | Protein_23 | autotransporter domain-containing protein | - |
| IN878_RS24960 () | 23266..23657 | + | 392 | Protein_24 | IS1 family transposase | - |
| IN878_RS24965 () | 23710..24923 | + | 1214 | WP_139371347.1 | IS3 family transposase IS629 | Transposase |
| IN878_RS24970 () | 24965..25276 | + | 312 | Protein_26 | IS1 family transposase IS1X2 | Transposase |
| IN878_RS24975 () | 25471..26571 | + | 1101 | WP_203037304.1 | Flagellin | VF |
| IN878_RS24980 () | 26661..27188 | + | 528 | WP_001556317.1 | phase 1 flagellin transcriptional repressor | - |
| IN878_RS24985 () | 27271..27937 | + | 667 | Protein_29 | IS1 family transposase IS1R | Transposase |
| IN878_RS24990 () | 27954..28325 | + | 372 | Protein_30 | Serine protease pic autotransporter | VF |
| IN878_RS24995 () | 29219..30049 | + | 831 | WP_112889124.1 | AraC family transcriptional regulator | - |
| IN878_RS25000 () | 30180..31136 | - | 957 | WP_112889123.1 | IS481 family transposase ISErsp1 | Transposase |
| IN878_RS25005 () | 31099..31551 | + | 453 | Protein_33 | IS110 family transposase ISEc21 | Transposase |
| IN878_RS25010 () | 31568..31876 | + | 309 | Protein_34 | DDE-type integrase/transposase/recombinase | - |
| IN878_RS25015 () | 31906..32115 | - | 210 | WP_094308932.1 | hypothetical protein | - |
| IN878_RS25020 () | 32164..32367 | - | 204 | WP_004150739.1 | hemolysin expression modulator Hha | - |
| IN878_RS25025 () | 32428..32922 | - | 495 | WP_094313750.1 | DNA-binding protein | - |
| IN878_RS25030 () | 32953..33525 | - | 573 | WP_094309628.1 | hypothetical protein | - |
| IN878_RS25035 () | 33530..33778 | - | 249 | WP_065801593.1 | hypothetical protein | - |
| IN878_RS25040 () | 34057..35063 | - | 1007 | Protein_40 | IS110 family transposase ISEc11 | Transposase |
| IN878_RS25045 () | 35620..35874 | - | 255 | WP_095153353.1 | hypothetical protein | - |
| IN878_RS25050 () | 35938..36183 | - | 246 | WP_065801591.1 | hypothetical protein | - |
| IN878_RS25055 () | 36218..36634 | - | 417 | WP_023292131.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| IN878_RS25060 () | 36631..36861 | - | 231 | WP_021312476.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| IN878_RS25065 () | 36968..37129 | + | 162 | WP_203037272.1 | hypothetical protein | - |
| IN878_RS25070 () | 37180..37440 | + | 261 | WP_032280099.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| IN878_RS25075 () | 37475..37723 | + | 249 | WP_071787159.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IN878_RS25080 () | 37885..38826 | - | 942 | WP_058820814.1 | hypothetical protein | - |
| IN878_RS25085 () | 39061..40461 | - | 1401 | WP_000996654.1 | ISNCY family transposase ISKpn21 | Transposase |
| IN878_RS25090 () | 40738..41163 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| IN878_RS25095 () | 41160..41510 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| IN878_RS25100 () | 41540..43154 | + | 1615 | Protein_52 | IS66 family transposase ISEc23 | Transposase |
| IN878_RS25105 () | 43185..43361 | + | 177 | Protein_53 | IS91 family transposase | - |
| IN878_RS25110 () | 43431..43634 | + | 204 | WP_205561504.1 | transposase domain-containing protein | - |
| IN878_RS25115 () | 43674..43940 | + | 267 | Protein_55 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| IN878_RS25120 () | 43927..44378 | - | 452 | Protein_56 | peptide deformylase | - |
| IN878_RS25125 () | 44487..48620 | - | 4134 | WP_063085579.1 | Hemoglobin-binding protease hbp autotransporter | VF |
| IN878_RS25130 () | 48788..48982 | + | 195 | Protein_58 | IS91 family transposase | - |
| IN878_RS25135 () | 48950..49165 | - | 216 | Protein_59 | helix-turn-helix transcriptional regulator | - |
| IN878_RS25140 () | 49261..49518 | + | 258 | Protein_60 | IS3 family transposase IS911 | Transposase |
| IN878_RS25145 () | 49586..50737 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| IN878_RS25150 () | 50750..51052 | - | 303 | Protein_62 | IS3 family transposase ISEc31 | Transposase |
| IN878_RS25155 () | 51244..52457 | + | 1214 | WP_139371347.1 | IS3 family transposase IS629 | Transposase |
| IN878_RS25160 () | 52675..56577 | - | 3903 | WP_001045657.1 | Serine protease EspP | VF |
| IN878_RS25165 () | 57204..58417 | + | 1214 | WP_168848548.1 | IS3 family transposase IS629 | Transposase |
| IN878_RS25170 () | 58694..58981 | - | 288 | WP_000222766.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IN878_RS25175 () | 58978..59229 | - | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| IN878_RS25180 () | 60194..61051 | - | 858 | WP_042634321.1 | incFII family plasmid replication initiator RepA | - |
| IN878_RS25185 () | 61044..61118 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| IN878_RS25190 () | 61363..61611 | - | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| IN878_RS25195 () | 61723..63294 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| IN878_RS25200 () | 63314..63661 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| IN878_RS25205 () | 63661..64338 | - | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| IN878_RS25210 () | 64558..65148 | - | 591 | WP_001375082.1 | DUF2726 domain-containing protein | - |
| IN878_RS25215 () | 65300..65926 | - | 627 | WP_000794191.1 | hypothetical protein | - |
| IN878_RS25220 () | 66338..66547 | - | 210 | WP_001297500.1 | hypothetical protein | - |
| IN878_RS25225 () | 66678..67238 | - | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| IN878_RS25230 () | 67341..68201 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| IN878_RS25235 () | 68260..69006 | - | 747 | WP_000205711.1 | conjugal transfer pilus acetylase TraX | - |
| IN878_RS25240 () | 69026..74296 | - | 5271 | WP_203037261.1 | Multifunctional conjugation protein TraI | Relaxase |
| IN878_RS25245 () | 74296..76530 | - | 2235 | WP_032316743.1 | type IV conjugative transfer system coupling protein TraD | - |
| IN878_RS25250 () | 76782..77513 | - | 732 | WP_203037262.1 | complement resistance protein TraT | - |
| IN878_RS25255 () | 77527..78036 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| IN878_RS25260 () | 78033..80858 | - | 2826 | WP_001007030.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IN878_RS25265 () | 80855..82228 | - | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| IN878_RS25270 () | 82228..82590 | - | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| IN878_RS25275 () | 82520..83065 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IN878_RS25280 () | 83052..83336 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IN878_RS25285 () | 83455..83802 | - | 348 | WP_001287679.1 | conjugal transfer protein TrbA | - |
| IN878_RS25290 () | 83818..84561 | - | 744 | WP_001030390.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IN878_RS25295 () | 84554..84811 | - | 258 | WP_000864328.1 | conjugal transfer protein TrbE | - |
| IN878_RS25300 () | 84837..86645 | - | 1809 | WP_089632924.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IN878_RS25305 () | 86642..87280 | - | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IN878_RS25310 () | 87289..88281 | - | 993 | WP_000830854.1 | conjugal transfer pilus assembly protein TraU | - |
| IN878_RS25315 () | 88437..89198 | - | 762 | Protein_95 | conjugal transfer protein TrbI | - |
| IN878_RS25320 () | 89198..89902 | - | 705 | WP_148724787.1 | type-F conjugative transfer system secretin TraK | - |
| IN878_RS25325 () | 89913..90479 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| IN878_RS25330 () | 90501..90812 | - | 312 | WP_194156710.1 | type IV conjugative transfer system protein TraL | - |
| IN878_RS25335 () | 90827..91186 | - | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| IN878_RS25340 () | 91220..91447 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| IN878_RS25345 () | 91541..92227 | - | 687 | WP_000332484.1 | PAS domain-containing protein | - |
| IN878_RS25350 () | 92418..92801 | - | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| IN878_RS25355 () | 93078..93725 | + | 648 | WP_000614934.1 | hypothetical protein | VF |
| IN878_RS25360 () | 94022..94843 | - | 822 | WP_021573168.1 | DUF945 domain-containing protein | - |
| IN878_RS25365 () | 94960..95247 | - | 288 | WP_000107538.1 | hypothetical protein | - |
| IN878_RS25370 () | 95603..95815 | + | 213 | WP_162491396.1 | hypothetical protein | - |
| IN878_RS25375 () | 96169..96327 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 96371..96595 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 96371..96595 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 96371..96595 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 96371..96595 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| IN878_RS25380 () | 96607..97326 | - | 720 | WP_021573167.1 | plasmid SOS inhibition protein A | - |
| IN878_RS25385 () | 97323..97757 | - | 435 | WP_000845930.1 | conjugation system SOS inhibitor PsiB | - |
| IN878_RS25390 () | 97812..99770 | - | 1959 | WP_021573166.1 | ParB/RepB/Spo0J family partition protein | - |
| IN878_RS25395 () | 99835..100068 | - | 234 | WP_000006030.1 | DUF905 family protein | - |
| IN878_RS25400 () | 100124..100663 | - | 540 | WP_009426937.1 | single-stranded DNA-binding protein | - |
| IN878_RS25405 () | 101569..102132 | - | 564 | WP_021573165.1 | class I SAM-dependent methyltransferase | - |
| IN878_RS25410 () | 102179..103540 | - | 1362 | WP_000170675.1 | DUF3560 domain-containing protein | - |
| IN878_RS25415 () | 103592..103822 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| IN878_RS25420 () | 104860..105051 | - | 192 | WP_001027519.1 | hypothetical protein | - |
| IN878_RS25425 () | 105048..105470 | - | 423 | WP_000271751.1 | DUF1380 family protein | - |
| IN878_RS25430 () | 105517..105819 | - | 303 | WP_077632858.1 | antirestriction protein | - |
| IN878_RS25435 () | 106359..107129 | - | 771 | WP_001006206.1 | hypothetical protein | - |
| IN878_RS25440 () | 107174..107608 | - | 435 | WP_000274502.1 | DUF1380 family protein | - |
| IN878_RS25445 () | 107622..107843 | - | 222 | WP_021573173.1 | hypothetical protein | - |
| IN878_RS25450 () | 107844..108527 | - | 684 | WP_000085936.1 | DNA methylase | - |
| IN878_RS25455 () | 108604..108897 | - | 294 | WP_072145986.1 | hypothetical protein | - |
| IN878_RS25460 () | 109045..110007 | + | 963 | WP_000959888.1 | plasmid segregation protein ParM | - |
| IN878_RS25465 () | 110010..110360 | + | 351 | WP_000361385.1 | plasmid partitioning/stability family protein | - |
| IN878_RS25470 () | 110511..111023 | - | 513 | WP_001027529.1 | hypothetical protein | - |
| IN878_RS25475 () | 111464..112999 | + | 1536 | WP_001282376.1 | pore-forming bacteriocin colicin B | - |
| IN878_RS25480 () | 113017..113544 | - | 528 | WP_021573172.1 | colicin B immunity protein | - |
| IN878_RS25485 () | 113788..114603 | + | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| IN878_RS25490 () | 114653..115006 | - | 354 | WP_161538563.1 | colicin M immunity protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|