MGE detailed information
MGE type: Conjugative plasmid MGE length: 123046 bp
Accession: NZ_CP062874 Location: 1..123046 Organism: Escherichia coli strain Res13-Lact-PEA14-20 Replicon: plasmid unnamed539
Accession: NZ_CP062874 Location: 1..123046 Organism: Escherichia coli strain Res13-Lact-PEA14-20 Replicon: plasmid unnamed539
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMP76_RS25015 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| IMP76_RS25020 () | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| IMP76_RS25025 () | 2124..2312 | - | 189 | WP_014640565.1 | hypothetical protein | - |
| IMP76_RS25030 () | 2686..3587 | - | 902 | Protein_3 | antimicrobial resistance protein Mig-14 | - |
| IMP76_RS25035 () | 3656..4765 | - | 1110 | WP_096896842.1 | SDR family oxidoreductase | - |
| IMP76_RS25040 () | 5198..6151 | - | 954 | WP_000280980.1 | omptin family outer membrane protease | - |
| IMP76_RS25045 () | 7424..7582 | - | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| IMP76_RS25050 () | 7766..8979 | + | 1214 | WP_162842477.1 | IS3 family transposase | - |
| IMP76_RS25055 () | 8982..13139 | - | 4158 | WP_195715510.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| IMP76_RS25060 () | 13310..13501 | + | 192 | Protein_9 | IS91 family transposase | - |
| IMP76_RS25065 () | 13469..13684 | - | 216 | Protein_10 | helix-turn-helix transcriptional regulator | - |
| IMP76_RS25070 () | 13780..14037 | + | 258 | Protein_11 | IS3 family transposase | - |
| IMP76_RS25075 () | 14244..15456 | + | 1213 | Protein_12 | IS3 family transposase | - |
| IMP76_RS25080 () | 15725..16012 | - | 288 | WP_000222766.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IMP76_RS25085 () | 16009..16260 | - | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| IMP76_RS25090 () | 17214..17321 | - | 108 | Protein_15 | incFII family plasmid replication initiator RepA | - |
| IMP76_RS25095 () | 17344..17592 | - | 249 | WP_000083841.1 | replication regulatory protein RepA | - |
| IMP76_RS25100 () | 18082..18837 | - | 756 | WP_000065240.1 | IS21-like element ISEc10 family helper ATPase IstB | - |
| IMP76_RS25105 () | 18834..20333 | - | 1500 | WP_000174402.1 | IS21-like element ISEc10 family transposase | - |
| IMP76_RS25110 () | 20829..21044 | - | 216 | Protein_19 | IS3 family transposase | - |
| IMP76_RS25115 () | 21119..21520 | - | 402 | WP_001222320.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| IMP76_RS25120 () | 21614..22447 | - | 834 | WP_000088802.1 | A24 family peptidase | - |
| IMP76_RS25125 () | 22499..23014 | - | 516 | WP_000998852.1 | type II secretion system protein M | - |
| IMP76_RS25130 () | 23001..24173 | - | 1173 | WP_071526091.1 | type II secretion system protein GspL | - |
| IMP76_RS25135 () | 24212..25189 | - | 978 | WP_195715511.1 | type II secretion system minor pseudopilin GspK | - |
| IMP76_RS25140 () | 25186..25785 | - | 600 | WP_000082784.1 | type II secretion system minor pseudopilin GspJ | - |
| IMP76_RS25145 () | 25782..26129 | - | 348 | WP_001420206.1 | type II secretion system minor pseudopilin GspI | - |
| IMP76_RS25150 () | 26144..26695 | - | 552 | WP_000082928.1 | type II secretion system minor pseudopilin GspH | - |
| IMP76_RS25155 () | 26692..27126 | - | 435 | WP_001231213.1 | type II secretion system major pseudopilin GspG | - |
| IMP76_RS25160 () | 27157..28380 | - | 1224 | WP_195715512.1 | type II secretion system inner membrane protein GspF | - |
| IMP76_RS25165 () | 28382..29884 | - | 1503 | WP_001418198.1 | type II secretion system ATPase GspE | - |
| IMP76_RS25170 () | 29881..31851 | - | 1971 | WP_013009342.1 | variant type II secretion system secretin EtpD | - |
| IMP76_RS25175 () | 31852..32727 | - | 876 | WP_001368871.1 | type II secretion system protein GspC | - |
| IMP76_RS25180 () | 32811..35471 | - | 2661 | WP_000770132.1 | peptidase M66 | - |
| IMP76_RS25185 () | 36028..36513 | - | 486 | Protein_34 | DDE-type integrase/transposase/recombinase | - |
| IMP76_RS25195 () | 37943..40153 | + | 2211 | WP_000592771.1 | catalase/peroxidase KatP | - |
| IMP76_RS25200 () | 40197..40466 | + | 270 | Protein_37 | cytochrome b562 family protein | - |
| IMP76_RS25205 () | 40521..41734 | + | 1214 | WP_162829241.1 | IS3 family transposase | - |
| IMP76_RS25210 () | 41779..42449 | - | 671 | Protein_39 | IS3 family transposase | - |
| IMP76_RS25215 () | 43435..43656 | + | 222 | WP_000907893.1 | hypothetical protein | - |
| IMP76_RS25220 () | 43923..44744 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| IMP76_RS25225 () | 44744..45850 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| IMP76_RS25230 () | 45944..47665 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| IMP76_RS25235 () | 47739..48737 | + | 999 | WP_077629919.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| IMP76_RS25240 () | 48829..48978 | + | 150 | Protein_45 | IS3 family transposase | - |
| IMP76_RS25245 () | 49041..49484 | - | 444 | Protein_46 | transposase | - |
| IMP76_RS25250 () | 49516..51087 | - | 1572 | WP_000381395.1 | IS66 family transposase | - |
| IMP76_RS25255 () | 51107..51454 | - | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| IMP76_RS25260 () | 51454..52131 | - | 678 | WP_001299364.1 | IS66 family insertion sequence hypothetical protein | - |
| IMP76_RS25265 () | 52186..53286 | - | 1101 | Protein_50 | IS66 family transposase | - |
| IMP76_RS25270 () | 53336..53683 | - | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| IMP76_RS25275 () | 53680..54060 | - | 381 | WP_001171554.1 | IS66 family insertion sequence hypothetical protein | - |
| IMP76_RS25280 () | 54210..54770 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| IMP76_RS25285 () | 54873..55733 | - | 861 | WP_000704529.1 | alpha/beta hydrolase | - |
| IMP76_RS25290 () | 55792..56538 | - | 747 | WP_000205715.1 | conjugal transfer pilus acetylase TraX | - |
| IMP76_RS25295 () | 56558..61828 | - | 5271 | WP_096942428.1 | conjugative transfer relaxase/helicase TraI | - |
| IMP76_RS25300 () | 61828..64044 | - | 2217 | WP_195715506.1 | type IV conjugative transfer system coupling protein TraD | - |
| IMP76_RS25305 () | 64298..65029 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| IMP76_RS25310 () | 65043..65552 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| IMP76_RS25315 () | 65549..68374 | - | 2826 | WP_195715507.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IMP76_RS25320 () | 68371..69744 | - | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| IMP76_RS25325 () | 69744..70106 | - | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| IMP76_RS25330 () | 70036..70581 | - | 546 | WP_000052614.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IMP76_RS25335 () | 70568..70852 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IMP76_RS25340 () | 70971..71318 | - | 348 | WP_001287893.1 | conjugal transfer protein TrbA | - |
| IMP76_RS25345 () | 71334..72077 | - | 744 | WP_001030395.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IMP76_RS25350 () | 72070..72327 | - | 258 | WP_000864311.1 | conjugal transfer protein TrbE | - |
| IMP76_RS25355 () | 72354..74162 | - | 1809 | WP_089645794.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IMP76_RS25360 () | 74159..74797 | - | 639 | WP_122994733.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IMP76_RS25365 () | 74825..75277 | - | 453 | WP_000069428.1 | hypothetical protein | - |
| IMP76_RS25370 () | 75307..75768 | - | 462 | WP_000277841.1 | hypothetical protein | - |
| IMP76_RS25375 () | 75794..76786 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| IMP76_RS25380 () | 76783..77415 | - | 633 | WP_001203722.1 | type-F conjugative transfer system protein TraW | - |
| IMP76_RS25385 () | 77412..77798 | - | 387 | WP_000214094.1 | type-F conjugative transfer system protein TrbI | - |
| IMP76_RS25390 () | 77795..80422 | - | 2628 | WP_078165113.1 | type IV secretion system protein TraC | - |
| IMP76_RS25395 () | 80582..80803 | - | 222 | WP_001278685.1 | conjugal transfer protein TraR | - |
| IMP76_RS25400 () | 80938..81453 | - | 516 | WP_000809841.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IMP76_RS25405 () | 81450..81701 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| IMP76_RS25410 () | 81713..81859 | - | 147 | Protein_79 | conjugal transfer protein TrbD | - |
| IMP76_RS25420 () | 83210..83800 | - | 591 | WP_000002778.1 | conjugal transfer protein TraP | - |
| IMP76_RS25425 () | 83790..85217 | - | 1428 | WP_000146649.1 | conjugal transfer protein TraB | - |
| IMP76_RS25430 () | 85217..85921 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| IMP76_RS25435 () | 85932..86498 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| IMP76_RS25440 () | 86520..86831 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| IMP76_RS25445 () | 86846..87211 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| IMP76_RS25450 () | 87244..87639 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| IMP76_RS25455 () | 87738..88427 | - | 690 | WP_000283379.1 | conjugal transfer transcriptional regulator TraJ | - |
| IMP76_RS25460 () | 88572..89269 | - | 698 | Protein_89 | IS1 family transposase | - |
| IMP76_RS25465 () | 89390..89773 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| IMP76_RS25470 () | 90094..90696 | + | 603 | WP_000243705.1 | transglycosylase SLT domain-containing protein | - |
| IMP76_RS25475 () | 90993..91814 | - | 822 | WP_001241365.1 | DUF945 domain-containing protein | - |
| IMP76_RS25480 () | 91934..92221 | - | 288 | WP_195715508.1 | hypothetical protein | - |
| IMP76_RS25485 () | 92246..92452 | - | 207 | WP_033804333.1 | hypothetical protein | - |
| IMP76_RS25490 () | 93143..93301 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 93345..93569 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 93345..93569 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 93345..93569 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 93345..93569 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| IMP76_RS25495 () | 93381..93569 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| IMP76_RS25500 () | 93581..94300 | - | 720 | WP_001276228.1 | plasmid SOS inhibition protein A | - |
| IMP76_RS25505 () | 94297..94731 | - | 435 | WP_000845901.1 | conjugation system SOS inhibitor PsiB | - |
| IMP76_RS25510 () | 94786..96744 | - | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| IMP76_RS25515 () | 96803..97036 | - | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| IMP76_RS25520 () | 97092..97619 | - | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| IMP76_RS25525 () | 98092..98364 | - | 273 | WP_072133095.1 | hypothetical protein | - |
| IMP76_RS25530 () | 98516..99079 | - | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| IMP76_RS25535 () | 99125..100486 | - | 1362 | WP_000170681.1 | DUF3560 domain-containing protein | - |
| IMP76_RS25540 () | 100538..100768 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| IMP76_RS25545 () | 101446..101774 | + | 329 | Protein_106 | pilus assembly protein | - |
| IMP76_RS25550 () | 101762..101944 | - | 183 | WP_001027505.1 | hypothetical protein | - |
| IMP76_RS25555 () | 101944..102405 | - | 462 | WP_042007484.1 | DUF1380 family protein | - |
| IMP76_RS25560 () | 102405..102707 | - | 303 | WP_072256028.1 | antirestriction protein | - |
| IMP76_RS25565 () | 103232..104203 | + | 972 | WP_000082154.1 | IS110-like element ISEc32 family transposase | - |
| IMP76_RS25570 () | 104464..104676 | - | 213 | WP_000092896.1 | hypothetical protein | - |
| IMP76_RS25575 () | 104689..104946 | - | 258 | Protein_112 | hypothetical protein | - |
| IMP76_RS25580 () | 104958..105655 | - | 698 | Protein_113 | IS1-like element IS1A family transposase | - |
| IMP76_RS25585 () | 105709..106041 | - | 333 | Protein_114 | hypothetical protein | - |
| IMP76_RS25590 () | 106110..106448 | - | 339 | WP_001513511.1 | hypothetical protein | - |
| IMP76_RS25595 () | 107518..108489 | - | 972 | WP_195715509.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| IMP76_RS25600 () | 108489..109655 | - | 1167 | WP_001238646.1 | plasmid-partitioning protein SopA | - |
| IMP76_RS25605 () | 109955..110652 | - | 698 | Protein_118 | IS1-like element IS1A family transposase | - |
| IMP76_RS25610 () | 110808..112310 | - | 1503 | WP_000715078.1 | hypothetical protein | - |
| IMP76_RS25615 () | 112707..112865 | - | 159 | WP_169053643.1 | hypothetical protein | - |
| IMP76_RS25620 () | 112973..113422 | - | 450 | WP_000238252.1 | hypothetical protein | - |
| IMP76_RS25625 () | 113540..114019 | + | 480 | WP_000190053.1 | hypothetical protein | - |
| IMP76_RS25630 () | 114459..114686 | + | 228 | Protein_123 | malate dehydrogenase | - |
| IMP76_RS25635 () | 114683..114814 | - | 132 | Protein_124 | phosphopyruvate hydratase | - |
| IMP76_RS25640 () | 114812..115069 | + | 258 | Protein_125 | Tn3 family transposase | - |
| IMP76_RS25645 () | 115303..116160 | - | 858 | WP_000968139.1 | iron/manganese ABC transporter permease subunit SitD | - |
| IMP76_RS25650 () | 116157..117014 | - | 858 | WP_000992806.1 | iron/manganese ABC transporter permease subunit SitC | - |
| IMP76_RS25655 () | 117011..117838 | - | 828 | WP_000983710.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| IMP76_RS25660 () | 117838..118752 | - | 915 | WP_000949004.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| IMP76_RS25665 () | 119108..119805 | + | 698 | Protein_130 | IS1 family transposase | - |
| IMP76_RS25670 () | 119985..120498 | - | 514 | Protein_131 | DUF4113 domain-containing protein | - |
| IMP76_RS25675 () | 120559..120663 | - | 105 | Protein_132 | AAA family ATPase | - |
| IMP76_RS25680 () | 120665..120988 | - | 324 | Protein_133 | helix-turn-helix domain-containing protein | - |
| IMP76_RS25685 () | 121069..122282 | + | 1214 | WP_162829241.1 | IS3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|