MGE detailed information
MGE type: Conjugative plasmid MGE length: 112076 bp
Accession: NZ_CP062862 Location: 1..112076 Organism: Escherichia coli strain Res13-Lact-PEB14-36 Replicon: plasmid unnamed476
Accession: NZ_CP062862 Location: 1..112076 Organism: Escherichia coli strain Res13-Lact-PEB14-36 Replicon: plasmid unnamed476
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMP96_RS00555 () | 46..1077 | + | 1032 | WP_000907870.1 | replication initiation protein | - |
| IMP96_RS00560 () | 1773..1985 | + | 213 | WP_021265676.1 | hypothetical protein | - |
| IMP96_RS00565 () | 2100..3308 | - | 1209 | WP_000198533.1 | IS91 family transposase | - |
| IMP96_RS00570 () | 3289..3561 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| IMP96_RS00575 () | 3813..5021 | - | 1209 | WP_000198533.1 | IS91 family transposase | - |
| IMP96_RS00580 () | 5002..5274 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| IMP96_RS00585 () | 5351..7765 | - | 2415 | Protein_6 | Tn3-like element TnAs1 family transposase | - |
| IMP96_RS00590 () | 7769..8329 | - | 561 | WP_001161490.1 | recombinase family protein | - |
| IMP96_RS00595 () | 8505..8855 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| IMP96_RS00600 () | 9058..10071 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| IMP96_RS00605 () | 10229..10702 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| IMP96_RS00610 () | 10833..11621 | + | 789 | WP_000503573.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 | - |
| IMP96_RS00615 () | 11823..12527 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| IMP96_RS00620 () | 12580..13335 | + | 756 | Protein_13 | IS110-like element IS5075 family transposase | - |
| IMP96_RS00625 () | 13517..13693 | - | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| IMP96_RS00630 () | 14023..14838 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| IMP96_RS00635 () | 14925..15167 | + | 243 | Protein_16 | phosphoglucosamine mutase | - |
| IMP96_RS00640 () | 15121..15372 | - | 252 | WP_001445143.1 | hypothetical protein | - |
| IMP96_RS00645 () | 15403..16539 | - | 1137 | WP_023140202.1 | IS91 family transposase | - |
| IMP96_RS00650 () | 16906..17175 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| IMP96_RS00655 () | 17172..17453 | + | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IMP96_RS00660 () | 17493..18341 | + | 849 | WP_021265674.1 | 3'-5' exonuclease | - |
| IMP96_RS00665 () | 18458..18931 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| IMP96_RS00670 () | 19408..19674 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| IMP96_RS00675 () | 19674..20168 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| IMP96_RS00680 () | 20224..20826 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| IMP96_RS00685 () | 21180..22526 | + | 1347 | WP_001132032.1 | hypothetical protein | - |
| IMP96_RS00690 () | 22805..23008 | + | 204 | Protein_27 | hypothetical protein | - |
| IMP96_RS00695 () | 23024..23721 | - | 698 | Protein_28 | IS1 family transposase | - |
| IMP96_RS00700 () | 24188..25462 | + | 1275 | WP_001459502.1 | colicin-Ia | - |
| IMP96_RS00705 () | 25480..25827 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| IMP96_RS00710 () | 25946..26294 | + | 349 | Protein_31 | hypothetical protein | - |
| IMP96_RS00715 () | 26314..26904 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| IMP96_RS00720 () | 26904..27161 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| IMP96_RS00725 () | 27512..28513 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| IMP96_RS00730 () | 28689..29033 | - | 345 | WP_025653526.1 | hypothetical protein | - |
| IMP96_RS00735 () | 29532..29786 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| IMP96_RS00740 () | 29831..30757 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| IMP96_RS00745 () | 31289..31702 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| IMP96_RS00750 () | 31704..32483 | + | 780 | WP_021537353.1 | site-specific integrase | - |
| IMP96_RS00755 () | 32663..33307 | + | 645 | WP_001144036.1 | ParA family protein | - |
| IMP96_RS00760 () | 33394..33702 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| IMP96_RS00765 () | 34116..35096 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| IMP96_RS00770 () | 35089..35505 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| IMP96_RS00775 () | 35507..36781 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| IMP96_RS00780 () | 36781..37218 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| IMP96_RS00785 () | 37215..37463 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| IMP96_RS00790 () | 37881..38783 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| IMP96_RS00795 () | 38780..39091 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| IMP96_RS00800 () | 39168..39851 | + | 684 | WP_000086178.1 | DNA methylase | - |
| IMP96_RS00805 () | 39852..40073 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| IMP96_RS00810 () | 40085..40519 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| IMP96_RS00815 () | 40570..41340 | + | 771 | WP_001044393.1 | hypothetical protein | - |
| IMP96_RS00820 () | 41881..42183 | + | 303 | WP_072132163.1 | antirestriction protein | - |
| IMP96_RS00825 () | 42230..42652 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| IMP96_RS00830 () | 42649..42840 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| IMP96_RS00835 () | 43173..43241 | - | 69 | Protein_56 | pilus protein | - |
| IMP96_RS00840 () | 43610..44137 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| IMP96_RS00845 () | 44195..44428 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| IMP96_RS00850 () | 44487..46445 | + | 1959 | WP_021265661.1 | ParB/RepB/Spo0J family partition protein | - |
| IMP96_RS00855 () | 46500..46934 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| IMP96_RS00860 () | 46931..47650 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| IMP96_RS00865 () | 47647..48243 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| IMP96_RS00870 () | 48706..49206 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| IMP96_RS00875 () | 49935..50369 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| IMP96_RS00880 () | 50461..50727 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| IMP96_RS00885 () | 50792..51733 | + | 942 | WP_000038339.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| IMP96_RS00890 () | 51795..51965 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| IMP96_RS00895 () | 51996..52247 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| IMP96_RS00900 () | 52281..52478 | - | 198 | WP_001412266.1 | hypothetical protein | - |
| IMP96_RS00905 () | 52827..53675 | + | 849 | WP_025653527.1 | DUF4942 domain-containing protein | - |
| IMP96_RS00910 () | 53760..54095 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| IMP96_RS00915 () | 54329..54661 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| IMP96_RS00920 () | 54672..57371 | + | 2700 | WP_024143648.1 | IncI1-type relaxase NikB | - |
| IMP96_RS00925 () | 57408..59699 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| IMP96_RS00930 () | 59692..60762 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| IMP96_RS00935 () | 60781..61989 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 62169..62226 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 62169..62226 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 62169..62226 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 62169..62226 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| IMP96_RS00940 () | 62281..62433 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| IMP96_RS00945 () | 62505..62756 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| IMP96_RS00950 () | 63415..63591 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| IMP96_RS00955 () | 63983..64192 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| IMP96_RS00960 () | 64264..64914 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| IMP96_RS00965 () | 64988..67156 | - | 2169 | WP_021537350.1 | DotA/TraY family protein | - |
| IMP96_RS00970 () | 67253..67837 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| IMP96_RS00975 () | 67866..69068 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| IMP96_RS00980 () | 69035..69649 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| IMP96_RS00985 () | 69649..72693 | - | 3045 | WP_021265678.1 | IncI1-type conjugal transfer protein TraU | - |
| IMP96_RS00990 () | 72783..73583 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| IMP96_RS00995 () | 73567..73755 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| IMP96_RS01000 () | 73819..74223 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| IMP96_RS01005 () | 74274..74801 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| IMP96_RS01010 () | 74801..75505 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| IMP96_RS01015 () | 75505..76794 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| IMP96_RS01020 () | 76797..77780 | - | 984 | WP_001191877.1 | IncI1-type conjugal transfer protein TraN | - |
| IMP96_RS01025 () | 77791..78483 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| IMP96_RS01030 () | 78480..78827 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| IMP96_RS01035 () | 78845..82612 | - | 3768 | WP_001141527.1 | DNA primase | - |
| IMP96_RS01040 () | 82701..83252 | - | 552 | WP_000014583.1 | phospholipase D family protein | - |
| IMP96_RS01045 () | 83267..83557 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| IMP96_RS01050 () | 83554..84702 | - | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| IMP96_RS01055 () | 84699..85517 | - | 819 | WP_000646098.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| IMP96_RS01060 () | 85514..85972 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| IMP96_RS01065 () | 86367..86951 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| IMP96_RS01070 () | 87011..88213 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| IMP96_RS01075 () | 88298..89122 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| IMP96_RS01080 () | 89273..90427 | - | 1155 | WP_001139957.1 | integrase | - |
| IMP96_RS01085 () | 90411..90536 | + | 126 | Protein_106 | prepilin, shufflon protein A | - |
| IMP96_RS01090 () | 90585..90833 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| IMP96_RS01095 () | 90830..91027 | - | 198 | WP_032159596.1 | hypothetical protein | - |
| IMP96_RS01100 () | 91803..92018 | + | 216 | Protein_109 | IS1380 family transposase | - |
| IMP96_RS01105 () | 92035..92732 | - | 698 | Protein_110 | IS1 family transposase | - |
| IMP96_RS01110 () | 92937..93899 | + | 963 | WP_195686648.1 | IS5 family transposase | - |
| IMP96_RS01115 () | 94278..95153 | + | 876 | WP_013188473.1 | class A extended-spectrum beta-lactamase CTX-M-1 | - |
| IMP96_RS01120 () | 95200..95532 | - | 333 | WP_064754192.1 | WbuC family cupin fold metalloprotein | - |
| IMP96_RS01125 () | 95755..97089 | - | 1335 | WP_024132209.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| IMP96_RS01130 () | 97089..97745 | - | 657 | WP_001193553.1 | prepilin peptidase | - |
| IMP96_RS01135 () | 97730..98290 | - | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| IMP96_RS01140 () | 98300..98914 | - | 615 | WP_000959785.1 | pilus assembly protein PilX | - |
| IMP96_RS01145 () | 98932..100029 | - | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| IMP96_RS01150 () | 100042..101595 | - | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| IMP96_RS01155 () | 101606..102058 | - | 453 | WP_001247334.1 | type IV pilus biogenesis protein PilP | - |
| IMP96_RS01160 () | 102045..103340 | - | 1296 | WP_000752772.1 | type 4b pilus protein PilO2 | - |
| IMP96_RS01165 () | 103333..105015 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| IMP96_RS01170 () | 105029..105466 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| IMP96_RS01175 () | 105466..106533 | - | 1068 | WP_001302629.1 | type IV pilus biogenesis lipoprotein PilL | - |
| IMP96_RS01180 () | 107157..107453 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| IMP96_RS01185 () | 107629..107883 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| IMP96_RS01190 () | 108045..108596 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| IMP96_RS01195 () | 108769..109452 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| IMP96_RS01200 () | 109706..110239 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| IMP96_RS01205 () | 110681..110968 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| IMP96_RS01210 () | 110886..111149 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA6370, TA30448 | NC_023329 | 1..104399 | 0.007 |