MGE detailed information
MGE type: Conjugative plasmid MGE length: 150153 bp
Accession: NZ_CP062858 Location: 1..150153 Organism: Escherichia coli O20:H12 strain Res13-Lact-PEB17-18 Replicon: plasmid unnamed973
Accession: NZ_CP062858 Location: 1..150153 Organism: Escherichia coli O20:H12 strain Res13-Lact-PEB17-18 Replicon: plasmid unnamed973
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMP99_RS24435 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| IMP99_RS24440 () | 1263..2003 | - | 741 | WP_001514245.1 | tyrosine-type recombinase/integrase | - |
| IMP99_RS24445 () | 2124..2312 | - | 189 | WP_001332052.1 | hypothetical protein | - |
| IMP99_RS24450 () | 2686..3588 | - | 903 | WP_001312822.1 | antimicrobial resistance protein Mig-14 | - |
| IMP99_RS24455 () | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| IMP99_RS24460 () | 5199..6152 | - | 954 | WP_000280980.1 | omptin family outer membrane protease | - |
| IMP99_RS24465 () | 7425..7583 | - | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| IMP99_RS24470 () | 7767..8980 | + | 1214 | WP_162842477.1 | IS3 family transposase | - |
| IMP99_RS24475 () | 9128..9453 | - | 326 | Protein_8 | DDE-type integrase/transposase/recombinase | - |
| IMP99_RS24480 () | 9552..11060 | - | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| IMP99_RS24485 () | 12704..13891 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| IMP99_RS24490 () | 13888..15828 | + | 1941 | WP_000733252.1 | MacB family efflux pump subunit | - |
| IMP99_RS24495 () | 15832..17202 | + | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| IMP99_RS24500 () | 17676..17870 | + | 195 | Protein_13 | IS200/IS605 family transposase | - |
| IMP99_RS24505 () | 17999..18940 | - | 942 | WP_000974762.1 | hypothetical protein | - |
| IMP99_RS24510 () | 19175..20564 | - | 1390 | Protein_15 | ISNCY family transposase | - |
| IMP99_RS24515 () | 20874..21023 | - | 150 | Protein_16 | IS3 family transposase | - |
| IMP99_RS24520 () | 21201..22394 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| IMP99_RS24530 () | 25473..25766 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| IMP99_RS24535 () | 25824..25999 | - | 176 | Protein_20 | lysis protein | - |
| IMP99_RS24540 () | 26577..27676 | + | 1100 | Protein_21 | transposase | - |
| IMP99_RS24545 () | 28912..30027 | + | 1116 | WP_001318220.1 | salmochelin biosynthesis C-glycosyltransferase IroB | - |
| IMP99_RS24550 () | 30167..33826 | + | 3660 | WP_001442133.1 | salmochelin/enterobactin export ABC transporter IroC | - |
| IMP99_RS24555 () | 33930..35159 | + | 1230 | WP_000933672.1 | catecholate siderophore esterase IroD | - |
| IMP99_RS24560 () | 35244..36200 | + | 957 | WP_000271277.1 | catecholate siderophore esterase IroE | - |
| IMP99_RS24565 () | 36245..38422 | - | 2178 | WP_001222186.1 | siderophore salmochelin receptor IroN | - |
| IMP99_RS24570 () | 39277..40311 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| IMP99_RS24575 () | 40871..41179 | - | 309 | WP_000377483.1 | hypothetical protein | - |
| IMP99_RS24580 () | 41278..41460 | - | 183 | WP_001514250.1 | hypothetical protein | Toxin Detail |
| IMP99_RS24585 () | 41457..41654 | - | 198 | WP_001324224.1 | toxin-antitoxin system protein | Antitoxin Detail |
| IMP99_RS24590 () | 42336..43610 | + | 1275 | WP_000489608.1 | HlyD family secretion protein | - |
| IMP99_RS24595 () | 43585..45699 | + | 2115 | WP_001183604.1 | peptidase domain-containing ABC transporter | - |
| IMP99_RS24600 () | 45869..46180 | - | 312 | WP_001259758.1 | colicin V | - |
| IMP99_RS24605 () | 46158..46394 | - | 237 | WP_001323890.1 | colicin V immunity protein | - |
| IMP99_RS24610 () | 46555..47332 | + | 778 | Protein_35 | Gfo/Idh/MocA family oxidoreductase | - |
| IMP99_RS24615 () | 47334..47603 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| IMP99_RS24620 () | 47600..47866 | + | 267 | WP_001017350.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| IMP99_RS24625 () | 47922..48374 | - | 453 | WP_000670963.1 | N-acetyltransferase | - |
| IMP99_RS24630 () | 48667..48927 | + | 261 | WP_000343091.1 | hypothetical protein | - |
| IMP99_RS24635 () | 48924..49514 | + | 591 | WP_001518980.1 | hypothetical protein | - |
| IMP99_RS24640 () | 49534..49791 | - | 258 | WP_000142431.1 | hypothetical protein | - |
| IMP99_RS24645 () | 49920..50255 | + | 336 | WP_001080729.1 | colicin 1A immunity protein | - |
| IMP99_RS24650 () | 50277..52157 | - | 1881 | WP_001283335.1 | colicin | - |
| IMP99_RS24655 () | 52343..53191 | - | 849 | WP_001057989.1 | 3'-5' exonuclease | - |
| IMP99_RS24660 () | 53237..53518 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IMP99_RS24665 () | 53515..53784 | - | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| IMP99_RS24670 () | 54428..57394 | - | 2967 | WP_001138014.1 | Tn3-like element TnAs1 family transposase | - |
| IMP99_RS24675 () | 57398..57958 | - | 561 | WP_001161490.1 | recombinase family protein | - |
| IMP99_RS24680 () | 58134..58484 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| IMP99_RS24685 () | 58687..59700 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| IMP99_RS24690 () | 59856..60329 | + | 474 | WP_001317507.1 | trimethoprim-resistant dihydrofolate reductase DfrA5 | - |
| IMP99_RS24695 () | 60481..61185 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| IMP99_RS24700 () | 61249..61587 | + | 339 | Protein_53 | recombinase family protein | - |
| IMP99_RS24705 () | 61770..62630 | + | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| IMP99_RS24710 () | 62780..63058 | + | 279 | Protein_55 | IS91 family transposase | - |
| IMP99_RS24715 () | 63217..63921 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| IMP99_RS24720 () | 64025..64129 | + | 105 | Protein_57 | AAA family ATPase | - |
| IMP99_RS24725 () | 64190..64703 | + | 514 | Protein_58 | DUF4113 domain-containing protein | - |
| IMP99_RS24730 () | 64883..65580 | - | 698 | Protein_59 | IS1 family transposase | - |
| IMP99_RS24735 () | 65936..66850 | + | 915 | WP_001514243.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| IMP99_RS24740 () | 66850..67677 | + | 828 | WP_000983710.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| IMP99_RS24745 () | 67674..68531 | + | 858 | WP_000992806.1 | iron/manganese ABC transporter permease subunit SitC | - |
| IMP99_RS24750 () | 68528..69385 | + | 858 | WP_000968139.1 | iron/manganese ABC transporter permease subunit SitD | - |
| IMP99_RS24755 () | 69619..69876 | - | 258 | Protein_64 | Tn3 family transposase | - |
| IMP99_RS24760 () | 69874..70287 | + | 414 | Protein_65 | phosphopyruvate hydratase | - |
| IMP99_RS24765 () | 70628..71008 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| IMP99_RS24770 () | 71388..72581 | - | 1194 | WP_000095526.1 | MFS transporter | - |
| IMP99_RS24775 () | 72717..74441 | + | 1725 | WP_000602863.1 | aerobactin synthase IucA | - |
| IMP99_RS24780 () | 74442..75389 | + | 948 | WP_000011907.1 | N(6)-hydroxylysine O-acetyltransferase | - |
| IMP99_RS24785 () | 75389..77131 | + | 1743 | WP_001015721.1 | aerobactin synthase IucC | - |
| IMP99_RS24790 () | 77128..78405 | + | 1278 | WP_000750130.1 | NADPH-dependent L-lysine N(6)-monooxygenase | - |
| IMP99_RS24795 () | 78487..80688 | + | 2202 | WP_000973517.1 | ferric aerobactin receptor IutA | - |
| IMP99_RS24800 () | 81213..81910 | + | 698 | Protein_73 | IS1-like element IS1A family transposase | - |
| IMP99_RS24805 () | 82210..83376 | + | 1167 | WP_001238646.1 | plasmid-partitioning protein SopA | - |
| IMP99_RS24810 () | 83376..84347 | + | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| IMP99_RS24815 () | 84987..85325 | + | 339 | WP_001513511.1 | hypothetical protein | - |
| IMP99_RS24820 () | 85394..85968 | + | 575 | Protein_77 | hypothetical protein | - |
| IMP99_RS24825 () | 85981..86193 | + | 213 | WP_000092896.1 | hypothetical protein | - |
| IMP99_RS24830 () | 86454..87425 | - | 972 | WP_000082154.1 | IS110-like element ISEc32 family transposase | - |
| IMP99_RS24835 () | 87950..88252 | + | 303 | WP_072256028.1 | antirestriction protein | - |
| IMP99_RS24840 () | 88252..88713 | + | 462 | WP_042007484.1 | DUF1380 family protein | - |
| IMP99_RS24845 () | 88713..88895 | + | 183 | WP_001027505.1 | hypothetical protein | - |
| IMP99_RS24850 () | 88883..89211 | - | 329 | Protein_83 | pilus assembly protein | - |
| IMP99_RS24855 () | 89889..90119 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| IMP99_RS24860 () | 90171..91532 | + | 1362 | WP_000170680.1 | DUF3560 domain-containing protein | - |
| IMP99_RS24865 () | 91580..92143 | + | 564 | WP_001332335.1 | class I SAM-dependent methyltransferase | - |
| IMP99_RS24870 () | 92229..92648 | - | 420 | WP_015056142.1 | hypothetical protein | - |
| IMP99_RS24875 () | 92949..93581 | + | 633 | WP_000290818.1 | single-stranded DNA-binding protein | - |
| IMP99_RS24880 () | 93544..93777 | + | 234 | WP_000005988.1 | DUF905 family protein | - |
| IMP99_RS24885 () | 93841..95799 | + | 1959 | WP_000117202.1 | ParB/RepB/Spo0J family partition protein | - |
| IMP99_RS24890 () | 95854..96288 | + | 435 | WP_000845922.1 | conjugation system SOS inhibitor PsiB | - |
| IMP99_RS24895 () | 96285..97004 | + | 720 | WP_000994098.1 | plasmid SOS inhibition protein A | - |
| - () | 97016..97227 | + | 212 | NuclAT_0 | - | - |
| - () | 97016..97227 | + | 212 | NuclAT_0 | - | - |
| - () | 97016..97227 | + | 212 | NuclAT_0 | - | - |
| - () | 97016..97227 | + | 212 | NuclAT_0 | - | - |
| IMP99_RS24900 () | 97280..97441 | + | 162 | WP_001332444.1 | type I toxin-antitoxin system Hok family toxin | - |
| IMP99_RS24905 () | 97742..98039 | - | 298 | Protein_94 | hypothetical protein | - |
| IMP99_RS24910 () | 98340..98627 | + | 288 | WP_000107520.1 | hypothetical protein | - |
| IMP99_RS24915 () | 98746..99567 | + | 822 | WP_001234468.1 | DUF945 domain-containing protein | - |
| IMP99_RS24920 () | 99863..100453 | - | 591 | Protein_97 | transglycosylase SLT domain-containing protein | - |
| IMP99_RS24925 () | 100787..101170 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| IMP99_RS24930 () | 101357..102046 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| IMP99_RS24935 () | 102145..102540 | + | 396 | WP_195686852.1 | conjugal transfer relaxosome protein TraY | - |
| IMP99_RS24940 () | 102573..102938 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| IMP99_RS24945 () | 102953..103264 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| IMP99_RS24950 () | 103286..103852 | + | 567 | WP_000399785.1 | type IV conjugative transfer system protein TraE | - |
| IMP99_RS24955 () | 103863..104567 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| IMP99_RS24960 () | 104567..105994 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| IMP99_RS24965 () | 105984..106574 | + | 591 | WP_000002796.1 | conjugal transfer protein TraP | - |
| IMP99_RS24970 () | 106528..106758 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| IMP99_RS24975 () | 106770..107021 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| IMP99_RS24980 () | 107018..107533 | + | 516 | WP_000809841.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IMP99_RS24985 () | 107668..107889 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| IMP99_RS24990 () | 108049..110676 | + | 2628 | WP_001064252.1 | type IV secretion system protein TraC | - |
| IMP99_RS24995 () | 110673..111059 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| IMP99_RS25000 () | 111056..111688 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| IMP99_RS25005 () | 111685..112677 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| IMP99_RS25010 () | 112686..113324 | + | 639 | WP_000777693.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IMP99_RS25015 () | 113321..115129 | + | 1809 | WP_000821846.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IMP99_RS25020 () | 115156..115413 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| IMP99_RS25025 () | 115406..116149 | + | 744 | WP_001514239.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IMP99_RS25030 () | 116165..116512 | + | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| IMP99_RS25035 () | 116631..116915 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IMP99_RS25040 () | 116902..117447 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IMP99_RS25045 () | 117377..117739 | + | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| IMP99_RS25050 () | 117739..119112 | + | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| IMP99_RS25055 () | 119109..121934 | + | 2826 | WP_001007045.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IMP99_RS25060 () | 121931..122440 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| IMP99_RS25065 () | 122454..123185 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| IMP99_RS25070 () | 123438..125591 | + | 2154 | WP_001369365.1 | type IV conjugative transfer system coupling protein TraD | - |
| IMP99_RS25075 () | 125591..130861 | + | 5271 | WP_001514237.1 | conjugative transfer relaxase/helicase TraI | - |
| IMP99_RS25080 () | 130881..131627 | + | 747 | WP_000205766.1 | conjugal transfer pilus acetylase TraX | - |
| IMP99_RS25085 () | 131686..132546 | + | 861 | WP_000704522.1 | alpha/beta hydrolase | - |
| IMP99_RS25090 () | 132649..133209 | + | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| IMP99_RS25095 () | 133342..133554 | + | 213 | WP_001371875.1 | ANR family transcriptional regulator | - |
| IMP99_RS25100 () | 133799..134260 | + | 462 | WP_001514236.1 | thermonuclease family protein | - |
| IMP99_RS25105 () | 134306..134515 | + | 210 | WP_001514235.1 | hemolysin expression modulator Hha | - |
| IMP99_RS25110 () | 134554..135144 | + | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
| IMP99_RS25115 () | 135384..135644 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| IMP99_RS25120 () | 135869..135943 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| IMP99_RS25125 () | 135936..136764 | + | 829 | Protein_138 | incFII family plasmid replication initiator RepA | - |
| IMP99_RS25130 () | 137108..137542 | - | 435 | WP_000429836.1 | Hg(II)-responsive transcriptional regulator | - |
| IMP99_RS25135 () | 137614..137964 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| IMP99_RS25140 () | 137978..138253 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| IMP99_RS25145 () | 138289..138711 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| IMP99_RS25150 () | 138763..140457 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| IMP99_RS25155 () | 140475..140837 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| IMP99_RS25160 () | 140834..141070 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| IMP99_RS25165 () | 141106..141774 | + | 669 | WP_001300294.1 | EAL domain-containing protein | - |
| IMP99_RS25170 () | 141849..143099 | + | 1251 | Protein_147 | transposase | - |
| IMP99_RS25175 () | 143164..143868 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| IMP99_RS25180 () | 143929..144765 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| IMP99_RS25185 () | 144765..145568 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| IMP99_RS25190 () | 145629..146444 | - | 816 | WP_001043265.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| IMP99_RS25195 () | 146701..147603 | - | 903 | WP_001518958.1 | hypothetical protein | - |
| IMP99_RS25200 () | 147590..148309 | - | 720 | Protein_153 | AAA family ATPase | - |
| IMP99_RS25205 () | 148359..149063 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| IMP99_RS25210 () | 149127..149408 | - | 282 | Protein_155 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|