MGE detailed information
MGE type: Conjugative plasmid MGE length: 109586 bp
Accession: NZ_CP062812 Location: 1..109586 Organism: Escherichia coli strain Res13-Sevr-PER07-33 Replicon: plasmid unnamed476
Accession: NZ_CP062812 Location: 1..109586 Organism: Escherichia coli strain Res13-Sevr-PER07-33 Replicon: plasmid unnamed476
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMQ59_RS23840 () | 46..1077 | + | 1032 | WP_000907870.1 | replication initiation protein | - |
| IMQ59_RS23845 () | 1773..1985 | + | 213 | WP_021265676.1 | hypothetical protein | - |
| IMQ59_RS23850 () | 2100..3308 | - | 1209 | WP_000198533.1 | IS91 family transposase | - |
| IMQ59_RS23855 () | 3289..3561 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| IMQ59_RS23860 () | 3638..6052 | - | 2415 | Protein_4 | Tn3-like element TnAs1 family transposase | - |
| IMQ59_RS23865 () | 6056..6616 | - | 561 | WP_001161490.1 | recombinase family protein | - |
| IMQ59_RS23870 () | 6792..7142 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| IMQ59_RS23875 () | 7345..8358 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| IMQ59_RS23880 () | 8516..8989 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| IMQ59_RS23885 () | 9120..9908 | + | 789 | WP_000503573.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 | - |
| IMQ59_RS23890 () | 10110..10814 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| IMQ59_RS23895 () | 10867..11622 | + | 756 | Protein_11 | IS110-like element IS5075 family transposase | - |
| IMQ59_RS23900 () | 11804..11980 | - | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| IMQ59_RS23905 () | 12310..13125 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| IMQ59_RS23910 () | 13212..13454 | + | 243 | Protein_14 | phosphoglucosamine mutase | - |
| IMQ59_RS23915 () | 13408..13659 | - | 252 | WP_001445143.1 | hypothetical protein | - |
| IMQ59_RS23920 () | 13690..14826 | - | 1137 | WP_023140202.1 | IS91 family transposase | - |
| IMQ59_RS23925 () | 15193..15462 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| IMQ59_RS23930 () | 15459..15740 | + | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IMQ59_RS23935 () | 15780..16628 | + | 849 | WP_021265674.1 | 3'-5' exonuclease | - |
| IMQ59_RS23940 () | 16745..17218 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| IMQ59_RS23945 () | 17695..17961 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| IMQ59_RS23950 () | 17961..18455 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| IMQ59_RS23955 () | 18511..19113 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| IMQ59_RS23960 () | 19467..20813 | + | 1347 | WP_001132032.1 | hypothetical protein | - |
| IMQ59_RS23965 () | 21092..22972 | + | 1881 | WP_001283341.1 | colicin 1B | - |
| IMQ59_RS23970 () | 22990..23337 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| IMQ59_RS23975 () | 23456..23804 | + | 349 | Protein_27 | hypothetical protein | - |
| IMQ59_RS23980 () | 23824..24414 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| IMQ59_RS23985 () | 24414..24671 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| IMQ59_RS23990 () | 25022..26023 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| IMQ59_RS23995 () | 26199..26543 | - | 345 | WP_025653526.1 | hypothetical protein | - |
| IMQ59_RS24000 () | 27042..27296 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| IMQ59_RS24005 () | 27341..28267 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| IMQ59_RS24010 () | 28799..29212 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| IMQ59_RS24015 () | 29214..29993 | + | 780 | WP_021537353.1 | site-specific integrase | - |
| IMQ59_RS24020 () | 30173..30817 | + | 645 | WP_001144036.1 | ParA family protein | - |
| IMQ59_RS24025 () | 30904..31212 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| IMQ59_RS24030 () | 31626..32606 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| IMQ59_RS24035 () | 32599..33015 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| IMQ59_RS24040 () | 33017..34291 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| IMQ59_RS24045 () | 34291..34728 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| IMQ59_RS24050 () | 34725..34973 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| IMQ59_RS24055 () | 35391..36293 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| IMQ59_RS24060 () | 36290..36601 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| IMQ59_RS24065 () | 36678..37361 | + | 684 | WP_000086178.1 | DNA methylase | - |
| IMQ59_RS24070 () | 37362..37583 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| IMQ59_RS24075 () | 37595..38029 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| IMQ59_RS24080 () | 38080..38850 | + | 771 | WP_001044393.1 | hypothetical protein | - |
| IMQ59_RS24085 () | 39391..39693 | + | 303 | WP_072132163.1 | antirestriction protein | - |
| IMQ59_RS24090 () | 39740..40162 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| IMQ59_RS24095 () | 40159..40350 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| IMQ59_RS24100 () | 40683..40751 | - | 69 | Protein_52 | pilus protein | - |
| IMQ59_RS24105 () | 41120..41647 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| IMQ59_RS24110 () | 41705..41938 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| IMQ59_RS24115 () | 41997..43955 | + | 1959 | WP_021265661.1 | ParB/RepB/Spo0J family partition protein | - |
| IMQ59_RS24120 () | 44010..44444 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| IMQ59_RS24125 () | 44441..45160 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| IMQ59_RS24130 () | 45157..45753 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| IMQ59_RS24135 () | 46216..46716 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| IMQ59_RS24140 () | 47445..47879 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| IMQ59_RS24145 () | 47971..48237 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| IMQ59_RS24150 () | 48302..49243 | + | 942 | WP_000038339.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| IMQ59_RS24155 () | 49305..49475 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| IMQ59_RS24160 () | 49506..49757 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| IMQ59_RS24165 () | 49791..49988 | - | 198 | WP_001412266.1 | hypothetical protein | - |
| IMQ59_RS24170 () | 50337..51185 | + | 849 | WP_025653527.1 | DUF4942 domain-containing protein | - |
| IMQ59_RS24175 () | 51270..51605 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| IMQ59_RS24180 () | 51839..52171 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| IMQ59_RS24185 () | 52182..54881 | + | 2700 | WP_024143648.1 | IncI1-type relaxase NikB | - |
| IMQ59_RS24190 () | 54918..57209 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| IMQ59_RS24195 () | 57202..58272 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| IMQ59_RS24200 () | 58291..59499 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 59679..59736 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 59679..59736 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 59679..59736 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 59679..59736 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| IMQ59_RS24205 () | 59791..59943 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| IMQ59_RS24210 () | 60015..60266 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| IMQ59_RS24215 () | 60925..61101 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| IMQ59_RS24220 () | 61493..61702 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| IMQ59_RS24225 () | 61774..62424 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| IMQ59_RS24230 () | 62498..64666 | - | 2169 | WP_021537350.1 | DotA/TraY family protein | - |
| IMQ59_RS24235 () | 64763..65347 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| IMQ59_RS24240 () | 65376..66578 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| IMQ59_RS24245 () | 66545..67159 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| IMQ59_RS24250 () | 67159..70203 | - | 3045 | WP_021265678.1 | IncI1-type conjugal transfer protein TraU | - |
| IMQ59_RS24255 () | 70293..71093 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| IMQ59_RS24260 () | 71077..71265 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| IMQ59_RS24265 () | 71329..71733 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| IMQ59_RS24270 () | 71784..72311 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| IMQ59_RS24275 () | 72311..73015 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| IMQ59_RS24280 () | 73015..74304 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| IMQ59_RS24285 () | 74307..75290 | - | 984 | WP_001191877.1 | IncI1-type conjugal transfer protein TraN | - |
| IMQ59_RS24290 () | 75301..75993 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| IMQ59_RS24295 () | 75990..76337 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| IMQ59_RS24300 () | 76355..80122 | - | 3768 | WP_001141527.1 | DNA primase | - |
| IMQ59_RS24305 () | 80211..80762 | - | 552 | WP_000014583.1 | phospholipase D family protein | - |
| IMQ59_RS24310 () | 80777..81067 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| IMQ59_RS24315 () | 81064..82212 | - | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| IMQ59_RS24320 () | 82209..83027 | - | 819 | WP_000646098.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| IMQ59_RS24325 () | 83024..83482 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| IMQ59_RS24330 () | 83877..84461 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| IMQ59_RS24335 () | 84521..85723 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| IMQ59_RS24340 () | 85808..86632 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| IMQ59_RS24345 () | 86783..87937 | - | 1155 | WP_001139957.1 | integrase | - |
| IMQ59_RS24350 () | 88476..88808 | + | 333 | WP_064754192.1 | WbuC family cupin fold metalloprotein | - |
| IMQ59_RS24355 () | 88855..89730 | - | 876 | WP_013188473.1 | class A extended-spectrum beta-lactamase CTX-M-1 | - |
| IMQ59_RS24360 () | 90109..91071 | - | 963 | WP_195686648.1 | IS5 family transposase | - |
| IMQ59_RS24365 () | 91276..91973 | + | 698 | Protein_105 | IS1 family transposase | - |
| IMQ59_RS24370 () | 91990..92205 | - | 216 | Protein_106 | IS1380 family transposase | - |
| IMQ59_RS24375 () | 92981..93178 | + | 198 | WP_032159596.1 | hypothetical protein | - |
| IMQ59_RS24380 () | 93175..94599 | - | 1425 | WP_001389385.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| IMQ59_RS24385 () | 94599..95255 | - | 657 | WP_001193553.1 | prepilin peptidase | - |
| IMQ59_RS24390 () | 95240..95800 | - | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| IMQ59_RS24395 () | 95810..96424 | - | 615 | WP_000959785.1 | pilus assembly protein PilX | - |
| IMQ59_RS24400 () | 96442..97539 | - | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| IMQ59_RS24405 () | 97552..99105 | - | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| IMQ59_RS24410 () | 99116..99568 | - | 453 | WP_001247334.1 | type IV pilus biogenesis protein PilP | - |
| IMQ59_RS24415 () | 99555..100850 | - | 1296 | WP_000752772.1 | type 4b pilus protein PilO2 | - |
| IMQ59_RS24420 () | 100843..102525 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| IMQ59_RS24425 () | 102539..102976 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| IMQ59_RS24430 () | 102976..104043 | - | 1068 | WP_001302629.1 | type IV pilus biogenesis lipoprotein PilL | - |
| IMQ59_RS24435 () | 104667..104963 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| IMQ59_RS24440 () | 105139..105393 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| IMQ59_RS24445 () | 105555..106106 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| IMQ59_RS24450 () | 106279..106962 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| IMQ59_RS24455 () | 107216..107749 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| IMQ59_RS24460 () | 108191..108478 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| IMQ59_RS24465 () | 108396..108659 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA6370, TA30448 | NC_023329 | 1..104399 | 0.007 |